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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Ath-007385
UUCD1 version UUC-ArT-01665
Ensembl Protein ID AT1G48790.1
UniProt Accession Q8VYB5; Q8LFY1; Q9C747; AMSH1_ARATH
Genbank Protein ID AAG60133.1; AEE32350.1; AAL60033.1; AAM20241.1; AAM61146.1
Protein Name AMSH-like ubiquitin thioesterase 1; Deubiquitinating enzyme AMSH1
Genbank Nucleotide ID AC073555; CP002684; AY072212; AY096591; AY084581
Gene Name AMSH1; At1g48790; F11I4.4
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G48790 AT1G48790.1 AT1G48790.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
Protein-protein Interaction
PINAHINTMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family Identity E-Value Score Source Orthology
DUB/JAMM 41.63 1.00e-42 172.00 IUUC-Hsa-046463
Active Site
Position(s) Description Evidence
N/A N/A N/A
Organism Arabidopsis thaliana
Functional Description
(View)

Functional Description


     Zinc metalloprotease that cleaves 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.
 Zinc metalloprotease that cleaves 'Lys-48'- and 'Lys-63'-linked polyubiquitin chains.
Protein Sequence
(Fasta)
MGSSFETIDI ATSARRIGVD NRISLKFYFR IADNILKQAN IFRAEKNVID LYVMLLRFSS 60
LALETIPSHR DYRTSLKSNK EYLRMRLLDV LTELEKLKPV VQQRIDELYP KLKPRYNVQA 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Ath-007385|DUB,JAMM|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATCGCGAAGG TTTGGGTGAC AGAAAAAAAA ACATTGAGGA TTGGATGGGA TTTTCTACCG 60
GCCGACAGGA GACCGGTCAG AGCCGGTCGG TTTAAAAACA TTAGCAATCT CAATCTCTCA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Ath-007385|DUB,JAMM|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0378--Hydrolase
KW-0472--Membrane
KW-0479--Metal-binding
KW-0482--Metalloprotease
KW-0645--Protease
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
Interpro

IPR000555--JAMM/MPN+_dom
IPR015063--USP8_dimer
Pfam

PF01398--JAB
PF08969--USP8_dimer
SMART

SM00232--JAB_MPN
Gene Ontology

GO:0005737--C:cytoplasm
GO:0016020--C:membrane
GO:0046872--F:metal ion binding
GO:0008237--F:metallopeptidase activity
GO:0071108--P:protein K48-linked deubiquitination
GO:0070536--P:protein K63-linked deubiquitination
KEGG ath:AT1G48790
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000506 Aegilops tauschii 45.59 7.00e-112 397.00
IUUC-Aml-001297 Ailuropoda melanoleuca 46.24 1.00e-43 169.00
IUUC-Atr-002473 Amborella trichopoda 53.83 4.00e-147 514.00
IUUC-Apl-003560 Anas platyrhynchos 47.88 3.00e-42 165.00
IUUC-Aca-004523 Anolis carolinensis 47.27 4.00e-43 168.00
IUUC-Aly-005784 Arabidopsis lyrata 96.84 0.00e+00 1022.00
IUUC-Afl-008565 Aspergillus flavus 44.78 7.00e-45 174.00
IUUC-Ani-009164 Aspergillus nidulans 43.78 2.00e-43 169.00
IUUC-Ang-009659 Aspergillus niger 29.32 9.00e-47 180.00
IUUC-Aor-010102 Aspergillus oryzae 44.78 7.00e-45 174.00
IUUC-Ate-010360 Aspergillus terreus 43.28 2.00e-43 169.00
IUUC-Ame-011650 Astyanax mexicanus 47.88 2.00e-42 165.00
IUUC-Bgr-012260 Blumeria graminis 50.60 2.00e-43 169.00
IUUC-Bta-012468 Bos taurus 46.82 3.00e-44 171.00
IUUC-Bdi-014845 Brachypodium distachyon 46.92 5.00e-116 410.00
IUUC-Cja-019809 Callithrix jacchus 41.63 3.00e-44 171.00
IUUC-Cfa-020729 Canis familiaris 47.88 1.00e-43 169.00
IUUC-Cpo-022124 Cavia porcellus 50.30 3.00e-44 172.00
IUUC-Cre-022989 Chlamydomonas reinhardtii 53.37 1.00e-53 201.00
IUUC-Csa-023702 Chlorocebus sabaeus 44.27 1.00e-41 164.00
IUUC-Cho-024802 Choloepus hoffmanni 53.19 3.00e-42 165.00
IUUC-Cin-025539 Ciona intestinalis 43.98 4.00e-38 151.00
IUUC-Csv-026138 Ciona savignyi 42.77 4.00e-37 148.00
IUUC-Dre-027852 Danio rerio 47.88 2.00e-42 166.00
IUUC-Dno-029491 Dasypus novemcinctus 53.68 1.00e-41 163.00
IUUC-Dor-030785 Dipodomys ordii 51.39 6.00e-42 164.00
IUUC-Dse-031153 Dothistroma septosporum 33.87 3.00e-33 135.00
IUUC-Dme-031787 Drosophila melanogaster 47.57 1.00e-46 180.00
IUUC-Ete-032842 Echinops telfairi 52.21 2.00e-40 159.00
IUUC-Eca-034082 Equus caballus 46.82 7.00e-44 171.00
IUUC-Eeu-034738 Erinaceus europaeus 54.46 3.00e-35 142.00
IUUC-Fca-036175 Felis catus 46.24 1.00e-43 169.00
IUUC-Fal-037252 Ficedula albicollis 47.88 3.00e-42 165.00
IUUC-Fox-037879 Fusarium oxysporum 42.37 2.00e-41 162.00
IUUC-Fso-038095 Fusarium solani 43.95 9.00e-34 137.00
IUUC-Gmo-038927 Gadus morhua 48.30 3.00e-38 152.00
IUUC-Ggr-039788 Gaeumannomyces graminis 41.75 5.00e-39 155.00
IUUC-Gga-041246 Gallus gallus 48.48 2.00e-42 166.00
IUUC-Gac-041538 Gasterosteus aculeatus 48.98 1.00e-39 156.00
IUUC-Gma-042650 Glycine max 62.28 3.00e-170 590.00
IUUC-Ggo-045287 Gorilla gorilla 47.88 2.00e-41 162.00
IUUC-Hsa-046463 Homo sapiens 41.63 3.00e-44 172.00
IUUC-Hvu-047336 Hordeum vulgare 41.71 2.00e-65 241.00
IUUC-Itr-047930 Ictidomys tridecemlineatus 46.82 4.00e-44 171.00
IUUC-Kpa-049381 Komagataella pastoris 41.91 3.00e-47 181.00
IUUC-Lch-049954 Latimeria chalumnae 47.40 3.00e-45 175.00
IUUC-Lpe-051096 Leersia perrieri 47.92 3.00e-124 438.00
IUUC-Loc-052178 Lepisosteus oculatus 49.09 2.00e-43 169.00
IUUC-Lma-053221 Leptosphaeria maculans 40.00 3.00e-46 179.00
IUUC-Laf-053366 Loxodonta africana 48.48 8.00e-43 167.00
IUUC-Mcc-055560 Macaca mulatta 53.68 7.00e-42 164.00
IUUC-Meu-056009 Macropus eugenii 47.88 4.00e-41 161.00
IUUC-Mor-057282 Magnaporthe oryzae 43.81 5.00e-41 161.00
IUUC-Mpo-057473 Magnaporthe poae 43.33 1.00e-39 157.00
IUUC-Mtr-057642 Medicago truncatula 61.63 8.00e-180 622.00
IUUC-Mga-059433 Meleagris gallopavo 48.48 2.00e-42 166.00
IUUC-Mmr-061327 Microcebus murinus 52.94 2.00e-41 162.00
IUUC-Mdo-062783 Monodelphis domestica 45.66 1.00e-40 159.00
IUUC-Mmu-064307 Mus musculus 45.66 4.00e-43 167.00
IUUC-Mac-065572 Musa acuminata 55.53 6.00e-148 517.00
IUUC-Mpu-066259 Mustela putorius furo 49.09 6.00e-44 171.00
IUUC-Mlu-067657 Myotis lucifugus 46.82 3.00e-44 171.00
IUUC-Ncr-068670 Neurospora crassa 45.08 2.00e-41 163.00
IUUC-Nle-069180 Nomascus leucogenys 43.75 8.00e-42 164.00
IUUC-Opr-070830 Ochotona princeps 50.69 2.00e-41 162.00
IUUC-Ont-071929 Oreochromis niloticus 46.20 4.00e-42 164.00
IUUC-Oan-073314 Ornithorhynchus anatinus 43.93 1.00e-20 93.20
IUUC-Ocu-074386 Oryctolagus cuniculus 46.82 8.00e-44 170.00
IUUC-Oba-075358 Oryza barthii 51.76 1.00e-93 335.00
IUUC-Obr-076024 Oryza brachyantha 48.03 1.00e-125 442.00
IUUC-Ogl-077100 Oryza glaberrima 45.86 6.00e-114 403.00
IUUC-Ogu-078047 Oryza glumaepatula 47.23 1.00e-124 439.00
IUUC-Oin-079545 Oryza indica 47.31 3.00e-124 437.00
IUUC-Olo-080359 Oryza longistaminata 46.11 9.00e-116 409.00
IUUC-Ome-081619 Oryza meridionalis 47.50 5.00e-124 437.00
IUUC-Oni-082079 Oryza nivara 47.31 3.00e-124 437.00
IUUC-Opu-083914 Oryza punctata 45.52 3.00e-114 404.00
IUUC-Oru-085251 Oryza rufipogon 47.31 4.00e-124 437.00
IUUC-Osa-085426 Oryza sativa 47.31 3.00e-124 437.00
IUUC-Oga-088150 Otolemur garnettii 54.41 7.00e-42 164.00
IUUC-Oar-089824 Ovis aries 46.82 4.00e-44 171.00
IUUC-Ptr-090702 Pan troglodytes 41.63 3.00e-44 172.00
IUUC-Pan-091924 Papio anubis 42.08 2.00e-44 172.00
IUUC-Psi-093069 Pelodiscus sinensis 48.54 2.00e-44 172.00
IUUC-Pma-094125 Petromyzon marinus 45.66 9.00e-43 167.00
IUUC-Pno-094896 Phaeosphaeria nodorum 49.69 2.00e-42 166.00
IUUC-Ppa-095540 Physcomitrella patens 50.41 3.00e-93 335.00
IUUC-Pfo-096766 Poecilia formosa 50.34 3.00e-40 158.00
IUUC-Pab-098080 Pongo abelii 41.63 3.00e-44 171.00
IUUC-Pca-100352 Procavia capensis 53.68 5.00e-41 161.00
IUUC-Ppe-101461 Prunus persica 43.11 2.00e-106 378.00
IUUC-Pva-102762 Pteropus vampyrus 47.27 2.00e-41 162.00
IUUC-Pgr-103491 Puccinia graminis 43.97 2.00e-35 143.00
IUUC-Ptt-103871 Puccinia triticina 43.50 5.00e-33 134.00
IUUC-Pte-104295 Pyrenophora teres 41.91 1.00e-43 170.00
IUUC-Pyt-104611 Pyrenophora triticirepentis 43.53 3.00e-45 175.00
IUUC-Rno-104938 Rattus norvegicus 45.66 4.00e-43 168.00
IUUC-Sha-107154 Sarcophilus harrisii 48.48 4.00e-43 168.00
IUUC-Sja-107679 Schizosaccharomyces japonicus 46.97 2.00e-46 179.00
IUUC-Spo-108166 Schizosaccharomyces pombe 55.28 3.00e-46 178.00
IUUC-Smo-109437 Selaginella moellendorffii 67.65 2.00e-73 267.00
IUUC-Sit-110118 Setaria italica 46.56 7.00e-121 426.00
IUUC-Sly-111816 Solanum lycopersicum 60.85 1.00e-172 598.00
IUUC-Stu-112240 Solanum tuberosum 60.89 9.00e-171 592.00
IUUC-Sar-112924 Sorex araneus 50.69 2.00e-41 162.00
IUUC-Sbi-114439 Sorghum bicolor 45.47 1.00e-114 405.00
IUUC-Ssc-115372 Sus scrofa 47.40 4.00e-44 171.00
IUUC-Tgu-117057 Taeniopygia guttata 41.61 1.00e-31 129.00
IUUC-Tru-118459 Takifugu rubripes 44.89 4.00e-40 158.00
IUUC-Tsy-119100 Tarsius syrichta 41.97 1.00e-41 163.00
IUUC-Tni-120745 Tetraodon nigroviridis 45.45 3.00e-40 158.00
IUUC-Tca-121398 Theobroma cacao 49.12 2.00e-133 468.00
IUUC-Tre-121910 Trichoderma reesei 47.37 1.00e-31 130.00
IUUC-Tvi-122647 Trichoderma virens 26.98 8.00e-39 154.00
IUUC-Tae-124826 Triticum aestivum 46.44 1.00e-116 412.00
IUUC-Tur-126001 Triticum urartu 46.53 2.00e-115 408.00
IUUC-Tme-126874 Tuber melanosporum 43.92 2.00e-42 166.00
IUUC-Tbe-127977 Tupaia belangeri 36.80 1.00e-16 80.50
IUUC-Ttr-129114 Tursiops truncatus 53.68 9.00e-41 160.00
IUUC-Vpa-130821 Vicugna pacos 51.39 5.00e-42 164.00
IUUC-Vvi-131576 Vitis vinifera 62.15 0.00e+00 629.00
IUUC-Xtr-132499 Xenopus tropicalis 45.45 6.00e-39 154.00
IUUC-Xma-133318 Xiphophorus maculatus 47.88 1.00e-42 167.00
IUUC-Yli-134641 Yarrowia lipolytica 56.57 5.00e-53 201.00
Created Date 25-Jun-2017

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