iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Post-translational Modifications (PTMs)
CPLM	dbPAF	PhosphositePlus
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-13	50.4	710	737

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sdtllvsGsdDgtikvWDl 30
            +s+tc+a+   ++lv G  Dg++  WDl
   Q: 710  MGSITCIAWkG-DTLVLGDMDGNLNFWDL 737
           689******53.679*************8 PP

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MLPYTVNFKV SARTLTGALN AHNKAAVDWG WQGLIAYGCH SLVVVIDSNT AQTLQVLEKH 60
KADIVKVKWA RENYHHNIGS PYCLRLASAD VNGKIIVWDV AAGVAQCEIQ EHVKPIQDVQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACAGTGGAT GGCAGTGGCA GTTGCCCTAA ATTAACAAAT CAAAAGCAGA AAGGCAAACT 60
AGGACTTTTA TTGTTTTGTT TGCACGATTT TCAGCCATCT TTCTCCCACA AGGAAGAAAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1267--Proteomics identification
KW-1185--Reference proteome

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0005765--C:lysosomal membrane
GO:0015630--C:microtubule cytoskeleton

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001973	Ailuropoda melanoleuca	93.16	0.00e+00	2195.00
IUUC-Apl-003487	Anas platyrhynchos	85.38	0.00e+00	1954.00
IUUC-Aca-005128	Anolis carolinensis	84.67	0.00e+00	2039.00
IUUC-Ame-010938	Astyanax mexicanus	71.26	0.00e+00	1659.00
IUUC-Bta-013239	Bos taurus	94.44	0.00e+00	2213.00
IUUC-Cja-019424	Callithrix jacchus	94.03	0.00e+00	2204.00
IUUC-Cfa-020723	Canis familiaris	93.95	0.00e+00	2237.00
IUUC-Cpo-021768	Cavia porcellus	93.70	0.00e+00	2179.00
IUUC-Csa-023563	Chlorocebus sabaeus	94.46	0.00e+00	2211.00
IUUC-Cho-024395	Choloepus hoffmanni	83.12	0.00e+00	1655.00
IUUC-Dre-027774	Danio rerio	75.35	0.00e+00	1831.00
IUUC-Dno-029488	Dasypus novemcinctus	91.62	0.00e+00	2199.00
IUUC-Dor-030502	Dipodomys ordii	93.70	0.00e+00	1503.00
IUUC-Ete-032425	Echinops telfairi	83.25	0.00e+00	1911.00
IUUC-Eca-034402	Equus caballus	93.06	0.00e+00	2216.00
IUUC-Eeu-034955	Erinaceus europaeus	87.88	0.00e+00	1929.00
IUUC-Fca-036394	Felis catus	92.26	0.00e+00	2185.00
IUUC-Fal-037371	Ficedula albicollis	86.21	0.00e+00	1759.00
IUUC-Gmo-039210	Gadus morhua	75.52	0.00e+00	1422.00
IUUC-Gga-040395	Gallus gallus	84.91	0.00e+00	2029.00
IUUC-Gac-042195	Gasterosteus aculeatus	69.45	0.00e+00	1664.00
IUUC-Ggo-045386	Gorilla gorilla	88.20	0.00e+00	1161.00
IUUC-Hsa-046985	Homo sapiens	94.31	0.00e+00	2194.00
IUUC-Itr-048364	Ictidomys tridecemlineatus	93.77	0.00e+00	1211.00
IUUC-Lch-050581	Latimeria chalumnae	79.50	0.00e+00	1954.00
IUUC-Loc-052155	Lepisosteus oculatus	76.02	0.00e+00	1828.00
IUUC-Laf-053831	Loxodonta africana	92.38	0.00e+00	2253.00
IUUC-Mcc-055060	Macaca mulatta	94.64	0.00e+00	2219.00
IUUC-Meu-056066	Macropus eugenii	74.85	0.00e+00	1099.00
IUUC-Mga-059918	Meleagris gallopavo	85.20	0.00e+00	1987.00
IUUC-Mmr-061315	Microcebus murinus	94.06	0.00e+00	2187.00
IUUC-Mdo-062584	Monodelphis domestica	89.39	0.00e+00	2134.00
IUUC-Mmu-063106	Mus musculus	97.55	0.00e+00	2368.00
IUUC-Mpu-065981	Mustela putorius furo	94.04	0.00e+00	2122.00
IUUC-Mlu-066992	Myotis lucifugus	87.28	0.00e+00	2134.00
IUUC-Nle-069873	Nomascus leucogenys	94.22	0.00e+00	2194.00
IUUC-Opr-071105	Ochotona princeps	91.30	0.00e+00	1743.00
IUUC-Ont-071707	Oreochromis niloticus	76.41	0.00e+00	1871.00
IUUC-Oan-073195	Ornithorhynchus anatinus	88.60	0.00e+00	1931.00
IUUC-Ocu-074314	Oryctolagus cuniculus	93.30	0.00e+00	2153.00
IUUC-Ola-087220	Oryzias latipes	74.71	0.00e+00	1833.00
IUUC-Oga-088522	Otolemur garnettii	93.34	0.00e+00	2222.00
IUUC-Oar-090343	Ovis aries	94.28	0.00e+00	2207.00
IUUC-Ptr-090747	Pan troglodytes	94.31	0.00e+00	2194.00
IUUC-Pan-091747	Papio anubis	94.55	0.00e+00	2216.00
IUUC-Psi-093610	Pelodiscus sinensis	83.68	0.00e+00	2024.00
IUUC-Pfo-096429	Poecilia formosa	75.92	0.00e+00	1833.00
IUUC-Pab-097534	Pongo abelii	93.91	0.00e+00	1192.00
IUUC-Pca-100937	Procavia capensis	87.86	0.00e+00	2071.00
IUUC-Pva-102688	Pteropus vampyrus	87.38	0.00e+00	1870.00
IUUC-Sha-107611	Sarcophilus harrisii	89.57	0.00e+00	1875.00
IUUC-Smo-108681	Selaginella moellendorffii	22.90	5.00e-56	213.00
IUUC-Ssc-116007	Sus scrofa	93.40	0.00e+00	2232.00
IUUC-Tgu-116906	Taeniopygia guttata	85.20	0.00e+00	1927.00
IUUC-Tru-117693	Takifugu rubripes	75.24	0.00e+00	1852.00
IUUC-Tsy-119556	Tarsius syrichta	81.56	0.00e+00	1852.00
IUUC-Tni-120586	Tetraodon nigroviridis	75.36	0.00e+00	1840.00
IUUC-Tbe-127341	Tupaia belangeri	88.39	0.00e+00	2095.00
IUUC-Ttr-128750	Tursiops truncatus	91.25	0.00e+00	2109.00
IUUC-Vpa-130642	Vicugna pacos	85.76	0.00e+00	1462.00
IUUC-Xtr-132718	Xenopus tropicalis	78.36	0.00e+00	1892.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence