iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Xtr-132238

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme E2D 4 (putative)

Genbank Nucleotide ID

AAMC01014165

Gene Name

ube2d4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXETG00000019014.3	ENSXETT00000041238.3	ENSXETP00000041238.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	1.40e-56	190.3	5	139
UBD/UBC-like/UBD_UBC	1.20e-82	275.0	5	142

Active Site

Position(s)	Description	Evidence
85	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 1    RlkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkee 89
           R++kel++l++dpp+++sa+pv e dl++w+++i+Gp+d+p++ggvF l+i+fp+dYPfkPPkv f+tki+hPn+++nG++Cl+il+  
   Q: 5    RIQKELMDLQRDPPAQCSAGPVGE-DLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILR-- 90
           9***********************.9************************************************************9.. PP
   S: 90   ekWspalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           ++Wspal+v++vllsi+sll++pnp++pl  e+a+++k++re+y++ +r
   Q: 91   SQWSPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAR 139
           *********************************************9987 PP

UBD/UBC-like/UBD_UBC

   S: 1    rikkelkdllrdeeaqisadlvdddlfelratiagppdspyeggvffltiklptdypfkppkvafitkiyhpninsngsicldilrsqw 89
           ri+kel dl+rd++aq+sa++v++dlf+++ati+gp+dsp++ggvfflti++ptdypfkppkvaf+tkiyhpninsngsicldilrsqw
   Q: 5    RIQKELMDLQRDPPAQCSAGPVGEDLFHWQATIMGPNDSPFQGGVFFLTIHFPTDYPFKPPKVAFTTKIYHPNINSNGSICLDILRSQW 93
           8**************************************************************************************** PP
   S: 90   saaltlskvllslcslladaepddplvaeiariyktdkekykriarewt 138
           s+alt+skvlls+csll+d++pddplv+eia+ yk+d+eky+r arewt
   Q: 94   SPALTVSKVLLSICSLLCDPNPDDPLVPEIAHTYKADREKYNRLAREWT 142
           ************************************************8 PP

Organism

Xenopus tropicalis

Protein Sequence
(Fasta)

MALKRIQKEL MDLQRDPPAQ CSAGPVGEDL FHWQATIMGP NDSPFQGGVF FLTIHFPTDY 60
PFKPPKVAFT TKIYHPNINS NGSICLDILR SQWSPALTVS KVLLSICSLL CDPNPDDPLV 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCGCTGA AAAGGATCCA GAAGGTGAGA GAAGCAAAAC GAGAAAAAGC GGGGGAAAAA 60
CGCCGCGCTC CATCGTGAGA GGCACCGAAA TAGAAGCTAT GCGGCTACTA AGCGCACTGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005524--F:ATP binding

KEGG

xtr:100497147

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000292	Aegilops tauschii	79.59	6.00e-70	255.00
IUUC-Atr-002894	Amborella trichopoda	81.63	4.00e-71	259.00
IUUC-Aly-006221	Arabidopsis lyrata	81.63	2.00e-71	260.00
IUUC-Ath-007700	Arabidopsis thaliana	81.63	2.00e-70	257.00
IUUC-Afl-008709	Aspergillus flavus	78.87	6.00e-69	254.00
IUUC-Bdi-014561	Brachypodium distachyon	80.95	7.00e-72	261.00
IUUC-Bol-015722	Brassica oleracea	82.31	3.00e-72	263.00
IUUC-Bra-017985	Brassica rapa	82.31	9.00e-72	261.00
IUUC-Cja-019014	Callithrix jacchus	95.07	2.00e-80	290.00
IUUC-Cpo-021897	Cavia porcellus	95.80	5.00e-81	292.00
IUUC-Cre-022765	Chlamydomonas reinhardtii	78.91	8.00e-70	255.00
IUUC-Csa-023377	Chlorocebus sabaeus	95.10	3.00e-80	290.00
IUUC-Cme-027220	Cyanidioschyzon merolae	82.31	7.00e-72	262.00
IUUC-Dre-028686	Danio rerio	98.64	3.00e-85	306.00
IUUC-Dor-030323	Dipodomys ordii	97.28	2.00e-84	303.00
IUUC-Eca-033231	Equus caballus	97.84	4.00e-80	289.00
IUUC-Ggo-045361	Gorilla gorilla	97.96	9.00e-85	305.00
IUUC-Hsa-045934	Homo sapiens	97.96	9.00e-85	305.00
IUUC-Hvu-047546	Hordeum vulgare	79.59	3.00e-70	256.00
IUUC-Kpa-049290	Komagataella pastoris	77.55	4.00e-69	252.00
IUUC-Lpe-051289	Leersia perrieri	81.63	3.00e-71	259.00
IUUC-Loc-052838	Lepisosteus oculatus	97.96	9.00e-85	305.00
IUUC-Mcc-055421	Macaca mulatta	97.96	9.00e-85	305.00
IUUC-Mtr-058532	Medicago truncatula	80.27	2.00e-70	257.00
IUUC-Mac-064668	Musa acuminata	80.27	2.00e-70	258.00
IUUC-Nle-069715	Nomascus leucogenys	97.96	9.00e-85	305.00
IUUC-Ont-072562	Oreochromis niloticus	96.60	1.00e-83	301.00
IUUC-Oan-073026	Ornithorhynchus anatinus	97.14	3.00e-80	290.00
IUUC-Oba-075411	Oryza barthii	81.63	5.00e-71	259.00
IUUC-Obr-076734	Oryza brachyantha	80.95	8.00e-71	258.00
IUUC-Ogl-076968	Oryza glaberrima	81.63	5.00e-72	262.00
IUUC-Ogu-078091	Oryza glumaepatula	80.69	1.00e-70	260.00
IUUC-Oin-079659	Oryza indica	81.63	5.00e-72	262.00
IUUC-Olo-080786	Oryza longistaminata	81.63	5.00e-71	259.00
IUUC-Ome-081987	Oryza meridionalis	80.95	5.00e-71	259.00
IUUC-Oni-082391	Oryza nivara	81.63	5.00e-72	264.00
IUUC-Opu-084027	Oryza punctata	80.95	5.00e-71	259.00
IUUC-Oru-085167	Oryza rufipogon	81.63	6.00e-72	264.00
IUUC-Osa-086003	Oryza sativa	81.63	5.00e-72	262.00
IUUC-Ola-087515	Oryzias latipes	95.92	3.00e-83	299.00
IUUC-Olu-087615	Ostreococcus lucimarinus	76.19	1.00e-66	244.00
IUUC-Pan-092614	Papio anubis	95.17	3.00e-81	293.00
IUUC-Ppa-095177	Physcomitrella patens	80.95	1.00e-70	258.00
IUUC-Pfo-096867	Poecilia formosa	95.92	3.00e-83	299.00
IUUC-Pab-098760	Pongo abelii	97.28	3.00e-84	303.00
IUUC-Pop-098799	Populus trichocarpa	80.95	7.00e-71	258.00
IUUC-Ppe-101431	Prunus persica	81.63	3.00e-71	259.00
IUUC-Smo-109317	Selaginella moellendorffii	80.95	2.00e-70	257.00
IUUC-Sit-109936	Setaria italica	81.63	9.00e-72	262.00
IUUC-Sly-110857	Solanum lycopersicum	82.31	4.00e-72	263.00
IUUC-Stu-112436	Solanum tuberosum	82.99	4.00e-73	266.00
IUUC-Sbi-114840	Sorghum bicolor	81.63	5.00e-72	262.00
IUUC-Ssc-115391	Sus scrofa	97.96	9.00e-85	305.00
IUUC-Tsy-118832	Tarsius syrichta	95.24	9.00e-82	294.00
IUUC-Tca-121542	Theobroma cacao	80.27	1.00e-71	261.00
IUUC-Tae-123340	Triticum aestivum	82.31	6.00e-73	265.00
IUUC-Tur-126829	Triticum urartu	80.27	1.00e-70	258.00
IUUC-Tbe-128122	Tupaia belangeri	95.16	2.00e-60	223.00
IUUC-Vvi-131368	Vitis vinifera	80.27	6.00e-71	258.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence