iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099989

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_559520; POPTR_0005s22820g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s22820	POPTR_0005s22820.1	POPTR_0005s22820.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.00e-23	82.5	527	559
UBD/Beta-Prp	5.10e-43	148.5	263	470

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf...sdtllvsGsdDgtikvWDl 30
           gH++ v+c+++   + ++l+s+sdD ti++W +
   Q: 527  GHSGAVNCVSWnpaNPHMLASASDDRTIRIWGV 559
           8***********963399*************97 PP

UBD/Beta-Prp

   S: 43   kllrslsgheaevtavkfspdgkilvtgseDrtikvwdls...tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcle 130
            +l+ l+ h++ev+ ++fs++gk+l+++s+D+ + +w+++     +  h l+gh++ v s+s+sp+++ l++ +  +++r wd+++g+cl+
   Q: 263  RTLQILEAHSDEVWFLQFSHNGKYLASSSSDQSAIIWEIDvngGVSLKHRLSGHQKPVSSVSWSPDDHQLLTCGVEEVVRRWDVSSGECLQ 353
           34899********************************55555666788999**************************************** PP
   S: 131  etlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtlngh 221
             +++  g+v+c  +++ g+ ++sG +D+ + +W l  gk ++ ++g+ t ++  l+++s+gk+++s  + + + l d +++  v+++++ 
   Q: 354  VYEKVGLGLVSCGWFPD-GKWIFSGINDKSICMWEL-DGKEVECWKGQRTLKISDLEITSDGKQIISMCRGTALLLLDREAK--VERVIEE 440
           99999*******98877.*****************9.99***************************************9888..9****** PP
   S: 222  tdnvksvrfspnderlvsgssDgsiriWdl 251
           ++ ++s  +s+++ +l++    + i +W++
   Q: 441  DQAITSFSLSRDNRFLLVNLLNQEIHLWNI 470
           **********99999988889999****97 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGGVDDDEPA LKRLKLASGR LTGLSNGSSL TEPIVGSSRD LMARPLQSEG DEEVLGSKGV 60
IKRVEFVRII AKALYSLGYK KSYARLEEES GIPLYSSSVD IFTQQILDGS WDESVATLHK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCCCCAC GCAAAGAGTT AACCAAACCC CCTCCTCTCT CTTTCTCTTC CTTCCCTTCT 60
CTTTATCCTT CGCTTCTTTC TATAATACAC AAAGCAAAGG TACCAACCCA TTTCACTTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR006595--CTLH_C
IPR020472--G-protein_beta_WD-40_rep
IPR006594--LisH
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS50897--CTLH
PS50896--LISH
PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00668--CTLH
SM00320--WD40

KEGG

pop:POPTR_0005s22820g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000905	Aegilops tauschii	61.55	0.00e+00	667.00
IUUC-Atr-002649	Amborella trichopoda	63.92	0.00e+00	743.00
IUUC-Apl-003200	Anas platyrhynchos	36.88	1.00e-76	280.00
IUUC-Aca-005122	Anolis carolinensis	37.67	2.00e-81	296.00
IUUC-Aly-006260	Arabidopsis lyrata	61.60	0.00e+00	709.00
IUUC-Ath-007549	Arabidopsis thaliana	61.22	0.00e+00	692.00
IUUC-Ago-007896	Ashbya gossypii	23.03	9.00e-28	118.00
IUUC-Acl-008259	Aspergillus clavatus	34.19	2.00e-81	296.00
IUUC-Afl-008669	Aspergillus flavus	32.74	3.00e-78	286.00
IUUC-Ang-009832	Aspergillus niger	32.03	4.00e-72	265.00
IUUC-Aor-010221	Aspergillus oryzae	33.89	8.00e-82	297.00
IUUC-Ate-010262	Aspergillus terreus	34.11	4.00e-83	301.00
IUUC-Ame-010615	Astyanax mexicanus	37.50	3.00e-76	279.00
IUUC-Bgr-012047	Blumeria graminis	33.53	7.00e-68	251.00
IUUC-Bta-012566	Bos taurus	37.60	7.00e-76	277.00
IUUC-Bci-013589	Botrytis cinerea	33.14	7.00e-72	264.00
IUUC-Bdi-014338	Brachypodium distachyon	62.42	0.00e+00	699.00
IUUC-Bol-015143	Brassica oleracea	61.33	0.00e+00	699.00
IUUC-Bra-017245	Brassica rapa	61.39	0.00e+00	695.00
IUUC-Cja-019082	Callithrix jacchus	37.09	5.00e-79	288.00
IUUC-Cfa-020788	Canis familiaris	37.60	5.00e-76	277.00
IUUC-Csa-023815	Chlorocebus sabaeus	35.67	3.00e-61	229.00
IUUC-Cgl-026607	Colletotrichum gloeosporioides	31.03	5.00e-65	241.00
IUUC-Dre-027404	Danio rerio	36.49	6.00e-77	281.00
IUUC-Dno-029089	Dasypus novemcinctus	37.08	8.00e-79	287.00
IUUC-Dse-031569	Dothistroma septosporum	28.35	2.00e-58	220.00
IUUC-Dme-032077	Drosophila melanogaster	36.54	1.00e-79	290.00
IUUC-Eca-033943	Equus caballus	37.65	8.00e-76	277.00
IUUC-Fca-036556	Felis catus	36.65	2.00e-71	262.00
IUUC-Fox-037720	Fusarium oxysporum	31.30	1.00e-63	236.00
IUUC-Fso-038206	Fusarium solani	30.84	2.00e-60	226.00
IUUC-Gmo-039395	Gadus morhua	34.74	1.00e-74	273.00
IUUC-Ggr-039738	Gaeumannomyces graminis	32.57	2.00e-69	256.00
IUUC-Gga-040577	Gallus gallus	36.54	3.00e-80	292.00
IUUC-Gma-044009	Glycine max	74.18	0.00e+00	865.00
IUUC-Ggo-044684	Gorilla gorilla	36.76	5.00e-79	288.00
IUUC-Hsa-046838	Homo sapiens	36.76	5.00e-79	288.00
IUUC-Hvu-047226	Hordeum vulgare	61.87	0.00e+00	677.00
IUUC-Itr-048020	Ictidomys tridecemlineatus	36.76	4.00e-79	288.00
IUUC-Kpa-049141	Komagataella pastoris	29.89	2.00e-57	216.00
IUUC-Lpe-050963	Leersia perrieri	61.91	0.00e+00	709.00
IUUC-Loc-052708	Lepisosteus oculatus	37.19	3.00e-82	299.00
IUUC-Lma-053156	Leptosphaeria maculans	32.47	1.00e-70	260.00
IUUC-Laf-054153	Loxodonta africana	37.09	2.00e-79	289.00
IUUC-Mcc-054742	Macaca mulatta	36.76	5.00e-79	288.00
IUUC-Mor-056939	Magnaporthe oryzae	34.62	3.00e-75	275.00
IUUC-Mpo-057600	Magnaporthe poae	31.48	3.00e-66	246.00
IUUC-Mtr-058261	Medicago truncatula	73.32	0.00e+00	856.00
IUUC-Mga-059811	Meleagris gallopavo	35.25	1.00e-63	236.00
IUUC-Mvi-060274	Microbotryum violaceum	35.65	6.00e-84	305.00
IUUC-Mmr-060823	Microcebus murinus	37.09	7.00e-79	288.00
IUUC-Mdo-062394	Monodelphis domestica	37.67	1.00e-81	297.00
IUUC-Mmu-063924	Mus musculus	37.09	7.00e-79	287.00
IUUC-Mac-065563	Musa acuminata	66.32	0.00e+00	765.00
IUUC-Mpu-066858	Mustela putorius furo	36.53	6.00e-77	281.00
IUUC-Mlu-067659	Myotis lucifugus	37.09	5.00e-79	288.00
IUUC-Nfi-068498	Neosartorya fischeri	36.21	5.00e-82	298.00
IUUC-Ncr-068832	Neurospora crassa	31.29	3.00e-61	229.00
IUUC-Nle-069654	Nomascus leucogenys	37.60	5.00e-76	277.00
IUUC-Ont-071547	Oreochromis niloticus	36.69	3.00e-82	298.00
IUUC-Oan-073045	Ornithorhynchus anatinus	34.26	2.00e-70	259.00
IUUC-Ocu-073812	Oryctolagus cuniculus	36.33	2.00e-77	282.00
IUUC-Oba-075071	Oryza barthii	62.08	0.00e+00	725.00
IUUC-Obr-076614	Oryza brachyantha	61.07	0.00e+00	701.00
IUUC-Ogl-076963	Oryza glaberrima	64.20	0.00e+00	709.00
IUUC-Ogu-078436	Oryza glumaepatula	64.20	0.00e+00	709.00
IUUC-Oin-080021	Oryza indica	64.01	0.00e+00	706.00
IUUC-Olo-080298	Oryza longistaminata	64.01	0.00e+00	706.00
IUUC-Ome-081202	Oryza meridionalis	61.91	0.00e+00	722.00
IUUC-Oni-082604	Oryza nivara	61.91	0.00e+00	723.00
IUUC-Opu-083763	Oryza punctata	62.08	0.00e+00	723.00
IUUC-Oru-084243	Oryza rufipogon	61.91	0.00e+00	723.00
IUUC-Ola-086670	Oryzias latipes	34.80	1.00e-82	300.00
IUUC-Oga-088723	Otolemur garnettii	35.34	4.00e-72	265.00
IUUC-Oar-090125	Ovis aries	37.09	6.00e-79	288.00
IUUC-Ptr-090787	Pan troglodytes	37.60	5.00e-76	277.00
IUUC-Psi-093579	Pelodiscus sinensis	38.43	8.00e-78	283.00
IUUC-Pno-094912	Phaeosphaeria nodorum	34.26	2.00e-76	279.00
IUUC-Ppa-095307	Physcomitrella patens	52.46	5.00e-161	560.00
IUUC-Pfo-096394	Poecilia formosa	37.28	6.00e-84	304.00
IUUC-Pab-098459	Pongo abelii	36.90	4.00e-77	281.00
IUUC-Ppe-101227	Prunus persica	65.87	0.00e+00	767.00
IUUC-Pva-102404	Pteropus vampyrus	35.07	8.00e-66	244.00
IUUC-Ptt-103705	Puccinia triticina	26.41	2.00e-37	150.00
IUUC-Pte-104023	Pyrenophora teres	33.46	2.00e-74	272.00
IUUC-Pyt-104759	Pyrenophora triticirepentis	33.02	2.00e-73	270.00
IUUC-Rno-105335	Rattus norvegicus	36.80	2.00e-74	273.00
IUUC-Sce-106152	Saccharomyces cerevisiae	36.89	3.00e-17	83.60
IUUC-Sha-106497	Sarcophilus harrisii	36.96	1.00e-76	280.00
IUUC-Sja-107894	Schizosaccharomyces japonicus	35.63	1.00e-82	300.00
IUUC-Spo-108235	Schizosaccharomyces pombe	34.98	8.00e-82	297.00
IUUC-Smo-109054	Selaginella moellendorffii	53.99	1.00e-166	578.00
IUUC-Sit-110575	Setaria italica	62.15	0.00e+00	723.00
IUUC-Sly-111282	Solanum lycopersicum	67.47	0.00e+00	741.00
IUUC-Stu-112726	Solanum tuberosum	62.99	0.00e+00	734.00
IUUC-Sar-113539	Sorex araneus	42.77	3.00e-36	145.00
IUUC-Sbi-114344	Sorghum bicolor	60.93	0.00e+00	712.00
IUUC-Ssc-115532	Sus scrofa	36.76	4.00e-79	288.00
IUUC-Tgu-116728	Taeniopygia guttata	36.05	6.00e-80	291.00
IUUC-Tsy-119284	Tarsius syrichta	33.15	2.00e-58	219.00
IUUC-Tca-121755	Theobroma cacao	75.48	0.00e+00	884.00
IUUC-Tre-122234	Trichoderma reesei	31.61	6.00e-66	244.00
IUUC-Tae-125635	Triticum aestivum	60.87	0.00e+00	692.00
IUUC-Tur-126726	Triticum urartu	59.80	0.00e+00	687.00
IUUC-Tme-126972	Tuber melanosporum	36.66	3.00e-92	332.00
IUUC-Ttr-129184	Tursiops truncatus	35.67	5.00e-73	268.00
IUUC-Uma-129354	Ustilago maydis	30.61	2.00e-31	130.00
IUUC-Vda-129770	Verticillium dahliae	32.16	8.00e-64	237.00
IUUC-Vpa-130400	Vicugna pacos	37.60	1.00e-74	273.00
IUUC-Vvi-130991	Vitis vinifera	64.90	0.00e+00	733.00
IUUC-Xtr-132619	Xenopus tropicalis	36.16	3.00e-78	285.00
IUUC-Xma-134128	Xiphophorus maculatus	37.28	4.00e-84	305.00
IUUC-Yli-134521	Yarrowia lipolytica	37.09	8.00e-79	287.00
IUUC-Zma-135772	Zea mays	62.02	0.00e+00	691.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence