iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Gga-040796

Ensembl Protein ID

ENSGALP00000027934.3

UniProt Accession

F1NPD7; F1NPD7_CHICK

Genbank Protein ID

ENSGALP00000027934

Protein Name

Proteasomal ATPase-associated factor 1

Genbank Nucleotide ID

AADN04000476

Gene Name

PAAF1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSGALG00000017318.5	ENSGALT00000027987.5	ENSGALP00000027934.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.30e-20	71.3	132	169

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH  +v+c++f ++   ++sG+ D ++k+W+  +  ++
   Q: 132  GHVYDVNCCRFfPSgLVVLSGGMDAQLKIWSAEDASCV 169
           899*******99774668************98777665 PP

Organism

Gallus gallus

Protein Sequence
(Fasta)

MAATLRIQSD WSQALRRDEG EAWLSCRSPG KPTLYGSLTR RGLSTEGVPD IAASEGFVVG 60
EVTKKSILIS CPHENVSTKF LAPYTTFSRI HQKSITCLDI SSGGGLGVST STDGTMKIWQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGGTGCAGT ATCGAGATGG CGGCGACGCT GCGGATCCAG AGCGACTGGA GTCAGGCGCT 60
GAGGTGGGAG CTGCCCCTCG GTCCCTTTCC AGCCCCGATC TCCTTCTCCC GGCCCCGCGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR003143--Cyt_cd1_C
IPR023302--Pept_S9A_N
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0000502--C:proteasome complex

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002247	Ailuropoda melanoleuca	82.40	0.00e+00	656.00
IUUC-Apl-003653	Anas platyrhynchos	89.37	2.00e-172	598.00
IUUC-Aca-004747	Anolis carolinensis	80.00	0.00e+00	675.00
IUUC-Ago-007984	Ashbya gossypii	32.37	3.00e-23	102.00
IUUC-Bta-013482	Bos taurus	81.89	0.00e+00	657.00
IUUC-Cel-018693	Caenorhabditis elegans	26.30	4.00e-30	125.00
IUUC-Cja-018842	Callithrix jacchus	81.63	0.00e+00	650.00
IUUC-Cfa-020708	Canis familiaris	82.40	0.00e+00	655.00
IUUC-Cpo-021469	Cavia porcellus	81.12	0.00e+00	650.00
IUUC-Csa-024109	Chlorocebus sabaeus	81.89	0.00e+00	652.00
IUUC-Cin-025576	Ciona intestinalis	45.59	3.00e-90	325.00
IUUC-Cne-027041	Cryptococcus neoformans	29.05	2.00e-14	72.80
IUUC-Dno-029167	Dasypus novemcinctus	79.85	0.00e+00	640.00
IUUC-Dor-030470	Dipodomys ordii	51.23	5.00e-93	334.00
IUUC-Ete-033078	Echinops telfairi	63.28	1.00e-62	233.00
IUUC-Eca-034292	Equus caballus	71.83	2.00e-162	565.00
IUUC-Eeu-035251	Erinaceus europaeus	80.41	0.00e+00	626.00
IUUC-Fca-035982	Felis catus	82.14	0.00e+00	656.00
IUUC-Fal-036938	Ficedula albicollis	88.69	0.00e+00	662.00
IUUC-Ggo-044448	Gorilla gorilla	70.00	9.00e-120	422.00
IUUC-Hsa-046552	Homo sapiens	83.99	3.00e-168	584.00
IUUC-Itr-048359	Ictidomys tridecemlineatus	84.98	7.00e-162	562.00
IUUC-Lch-050291	Latimeria chalumnae	61.48	4.00e-134	470.00
IUUC-Loc-052254	Lepisosteus oculatus	69.90	3.00e-171	594.00
IUUC-Laf-053334	Loxodonta africana	80.36	0.00e+00	639.00
IUUC-Mcc-055257	Macaca mulatta	82.40	0.00e+00	655.00
IUUC-Meu-056613	Macropus eugenii	82.86	2.00e-128	451.00
IUUC-Mga-059647	Meleagris gallopavo	98.47	0.00e+00	759.00
IUUC-Mvi-060210	Microbotryum violaceum	24.57	1.00e-15	77.40
IUUC-Mmr-061119	Microcebus murinus	82.65	0.00e+00	656.00
IUUC-Mdo-062819	Monodelphis domestica	79.25	0.00e+00	635.00
IUUC-Mpu-066654	Mustela putorius furo	79.13	1.00e-175	608.00
IUUC-Mlu-067875	Myotis lucifugus	82.40	0.00e+00	653.00
IUUC-Nle-069290	Nomascus leucogenys	81.89	0.00e+00	651.00
IUUC-Opr-070348	Ochotona princeps	66.58	9.00e-156	542.00
IUUC-Oan-072693	Ornithorhynchus anatinus	75.27	6.00e-170	589.00
IUUC-Ocu-074103	Oryctolagus cuniculus	80.51	0.00e+00	639.00
IUUC-Oga-089096	Otolemur garnettii	82.09	8.00e-157	545.00
IUUC-Oar-089389	Ovis aries	81.12	0.00e+00	651.00
IUUC-Ptr-090483	Pan troglodytes	82.40	0.00e+00	657.00
IUUC-Pan-091915	Papio anubis	80.93	8.00e-96	343.00
IUUC-Psi-093034	Pelodiscus sinensis	88.62	0.00e+00	653.00
IUUC-Pab-097969	Pongo abelii	82.65	0.00e+00	657.00
IUUC-Pca-100381	Procavia capensis	75.51	5.00e-178	616.00
IUUC-Pva-103127	Pteropus vampyrus	80.84	4.00e-103	367.00
IUUC-Sce-106259	Saccharomyces cerevisiae	32.16	3.00e-26	112.00
IUUC-Sha-106604	Sarcophilus harrisii	82.91	0.00e+00	659.00
IUUC-Sar-113535	Sorex araneus	78.93	2.00e-173	601.00
IUUC-Ssc-115947	Sus scrofa	82.65	0.00e+00	654.00
IUUC-Tgu-117085	Taeniopygia guttata	93.84	0.00e+00	629.00
IUUC-Tsy-119428	Tarsius syrichta	80.54	3.00e-69	254.00
IUUC-Tbe-127687	Tupaia belangeri	46.28	1.00e-52	199.00
IUUC-Ttr-129277	Tursiops truncatus	76.45	1.00e-99	355.00
IUUC-Vpa-130349	Vicugna pacos	72.96	1.00e-160	558.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence