iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Aml-001801

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

ACTA01019351

Gene Name

WDR90

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSAMEG00000007232.1	ENSAMET00000007955.1	ENSAMEP00000007635.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.70e-33	113.3	1544	1577
UBD/Beta-Prp	2.80e-78	263.2	1413	1716

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
           gH ++v+ + f ++  + +++sdDg+++vW+l +
   Q: 1544 GHRSKVNEVVFsPStSHWATCSDDGSVRVWSLAS 1577
           8***********555889*************865 PP

UBD/Beta-Prp

   S: 14   tcvkfspdksllatgsrdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.............tgkcv 87
           t++++   ++ll  gs  g + vwd++   ++     +++e+  + +s     lv+gs+ r +++w +              +++ +
   Q: 1413 TSLCY-GATPLLYCGSNAGQVCVWDTSASRCFLVWDADDGEIGVLLCSGA--RLVSGSNTRRLRLWAVGavpelrckgsrarSSSVF 1496
           55555.56667777777777777777777777777777777777777777..57777777777777443344444656555555555 PP
   S: 88   htlk.ghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
           +  +   +  v+s  f+ s d  v+G+   t+    + +g   + + sgh++ vn vv++p+++  +++s+D+ vr+W+l++ +ll 
   Q: 1497 MERElTLDGAVVSAVFHDSMDMGVVGTTAGTLWYISWAEGASTR-LISGHRSKVNEVVFSPSTSHWATCSDDGSVRVWSLASTELLI 1582
           55555566777777777777777777777777776666777666.99**************************************** PP
   S: 174  tltgghtdsvyslsfdsng......kelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsg 254
           +++   ++s  +l++++ +      +++++g  dgt++++++++  +  +++ h++  + v+ s +++ ++sg +Dg + +   r+g
   Q: 1583 QFQV-LNQSCLCLAWSPPScgrpeqQQVAAGYSDGTLRVFSISRIAVEFKMHPHRAALTAVAYSADGQTILSGDKDGLVAVSRPRTG 1668
           **98.*********88877888888************************************************************** PP
   S: 255  dllktlqlhnssvisvavlsfgdnvl...........vlgsedskvniwk 293
            + ++l+ h+  +i+  +++ ++++            +++s+d+++ iw+
   Q: 1669 MTFRVLSDHQGALIA--TIQSTNKEHgdfgaegvdlwLAASSDQRISIWA 1716
           ********9944443..3333333333447777777788888******97 PP

Organism

Ailuropoda melanoleuca

Protein Sequence
(Fasta)

AGGTGAPQDT PLYFSAPLSR GGPPSGGGAP EPRKASRPAG PRVPGGVARA AQDSRLPPPA 60
VVWQHPFLNV FRHFKVGEWK RSTKEGDVAA VTDKTLKCTV YRIRGSVSAG NYIQLPKTST 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCTGGCGGGA CCGGTGCCCC TCAAGACACT CCTCTTTATT TTAGTGCCCC TCTCAGCCGA 60
GGAGGACCCC CGAGCGGCGG TGGGGCACCT GAGCCCAGGA AGGCGAGCAG GCCGGCGGGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007714--CFA20/WDR90/C3orf67
IPR002469--Peptidase_S9B_N
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR030466--WDR90

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF05018--DUF667
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003387	Anas platyrhynchos	55.91	0.00e+00	1764.00
IUUC-Aca-005235	Anolis carolinensis	53.79	0.00e+00	1650.00
IUUC-Ame-011595	Astyanax mexicanus	47.40	0.00e+00	1631.00
IUUC-Bta-012328	Bos taurus	74.97	0.00e+00	2507.00
IUUC-Cja-019058	Callithrix jacchus	70.44	0.00e+00	1244.00
IUUC-Cfa-020934	Canis familiaris	82.91	0.00e+00	2818.00
IUUC-Cpo-022025	Cavia porcellus	67.04	0.00e+00	2313.00
IUUC-Cre-022928	Chlamydomonas reinhardtii	29.28	4.00e-61	231.00
IUUC-Csa-023022	Chlorocebus sabaeus	69.37	0.00e+00	2320.00
IUUC-Cin-025133	Ciona intestinalis	35.64	0.00e+00	1152.00
IUUC-Csv-025816	Ciona savignyi	34.59	0.00e+00	1021.00
IUUC-Dre-028823	Danio rerio	48.53	0.00e+00	940.00
IUUC-Dno-029211	Dasypus novemcinctus	72.36	0.00e+00	966.00
IUUC-Dor-030211	Dipodomys ordii	69.23	0.00e+00	1369.00
IUUC-Ete-032363	Echinops telfairi	61.15	2.00e-133	469.00
IUUC-Eca-034296	Equus caballus	76.78	0.00e+00	2553.00
IUUC-Eeu-035226	Erinaceus europaeus	58.21	0.00e+00	858.00
IUUC-Fca-035384	Felis catus	82.43	0.00e+00	2899.00
IUUC-Fal-037660	Ficedula albicollis	55.23	0.00e+00	996.00
IUUC-Gga-040666	Gallus gallus	56.52	0.00e+00	1315.00
IUUC-Gac-041358	Gasterosteus aculeatus	46.80	0.00e+00	1540.00
IUUC-Ggo-045121	Gorilla gorilla	65.73	0.00e+00	2172.00
IUUC-Hsa-046289	Homo sapiens	68.40	0.00e+00	2229.00
IUUC-Itr-048485	Ictidomys tridecemlineatus	70.32	0.00e+00	2323.00
IUUC-Lch-050009	Latimeria chalumnae	49.07	0.00e+00	1679.00
IUUC-Loc-052629	Lepisosteus oculatus	45.39	0.00e+00	811.00
IUUC-Mcc-055834	Macaca mulatta	65.85	0.00e+00	1296.00
IUUC-Meu-056162	Macropus eugenii	56.92	0.00e+00	752.00
IUUC-Mga-060167	Meleagris gallopavo	52.68	0.00e+00	1612.00
IUUC-Mmr-060761	Microcebus murinus	73.94	2.00e-132	464.00
IUUC-Mdo-061886	Monodelphis domestica	58.02	0.00e+00	2120.00
IUUC-Mmu-063652	Mus musculus	68.29	0.00e+00	2431.00
IUUC-Mlu-068141	Myotis lucifugus	73.07	0.00e+00	2499.00
IUUC-Nle-069133	Nomascus leucogenys	69.65	0.00e+00	1316.00
IUUC-Ont-072496	Oreochromis niloticus	48.27	0.00e+00	1699.00
IUUC-Oan-072833	Ornithorhynchus anatinus	50.24	0.00e+00	885.00
IUUC-Ola-086564	Oryzias latipes	45.93	0.00e+00	1573.00
IUUC-Oga-088919	Otolemur garnettii	66.67	0.00e+00	2274.00
IUUC-Oar-089946	Ovis aries	62.89	0.00e+00	1964.00
IUUC-Ptr-090755	Pan troglodytes	67.69	0.00e+00	1879.00
IUUC-Pan-092054	Papio anubis	69.11	0.00e+00	2325.00
IUUC-Psi-093467	Pelodiscus sinensis	57.35	0.00e+00	1977.00
IUUC-Pma-094553	Petromyzon marinus	46.25	0.00e+00	817.00
IUUC-Pfo-096849	Poecilia formosa	46.70	0.00e+00	1476.00
IUUC-Pab-098320	Pongo abelii	67.94	0.00e+00	2043.00
IUUC-Pca-100172	Procavia capensis	61.70	0.00e+00	1204.00
IUUC-Pva-102772	Pteropus vampyrus	74.41	0.00e+00	1470.00
IUUC-Rno-105046	Rattus norvegicus	68.70	0.00e+00	2447.00
IUUC-Sha-107094	Sarcophilus harrisii	58.09	0.00e+00	2160.00
IUUC-Ssc-116257	Sus scrofa	69.45	0.00e+00	2295.00
IUUC-Tgu-117323	Taeniopygia guttata	53.91	0.00e+00	1463.00
IUUC-Tru-118717	Takifugu rubripes	44.95	0.00e+00	1513.00
IUUC-Tni-120108	Tetraodon nigroviridis	44.83	0.00e+00	1470.00
IUUC-Ttr-128378	Tursiops truncatus	81.29	0.00e+00	1032.00
IUUC-Xtr-131760	Xenopus tropicalis	49.79	0.00e+00	1686.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence