iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Tru-117944

UUCD1 version

UUC-TaR-00252

Ensembl Protein ID

ENSTRUP00000012889.1

UniProt Accession

H2SKF6; H2SKF6_TAKRU

Protein Name

Uncharacterized protein

Gene Name

STRN (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSTRUG00000005371.1	ENSTRUT00000012949.1	ENSTRUP00000012888.1
ENSTRUG00000005371.1	ENSTRUT00000012950.1	ENSTRUP00000012889.1
ENSTRUG00000005371.1	ENSTRUT00000012951.1	ENSTRUP00000012890.1
ENSTRUG00000005371.1	ENSTRUT00000012952.1	ENSTRUP00000012891.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-29	99.7	706	743
UBD/Beta-Prp	6.60e-48	164.6	461	658

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           H d vt+la  ++  +l sGs+D +i++W+l + ++++
   Q: 706  HLDAVTSLAVdPNgLYLMSGSHDSSIRLWNLESKTCIQ 743
           99*********77799***************9999987 PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++++a++f+p +++lvt+seD+t+k w+l+           + ++++t+++h   vls+ +s sg+   sG+ d ti++w+++
   Q: 461  TLRSHFDGIRALTFHPVEPVLVTASEDHTLKMWNLQktapakksaslDVEPIYTFRAHRGAVLSVVMSSSGEQCFSGGVDGTIQCWNTP 549
           7899**********************************************************************************998 PP
   S: 125  tgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvysls..fdsngkelvsgsl 200
           +                 l gh ++v+++v+++  + l s+s+D+tvrlWd +t +  l  + ++++  v s    + s+  +lv+  +
   Q: 550  NPNIDPYdsydpsvlrgALCGHADSVWGLVYSSAHQRLLSCSADGTVRLWDANTTSpALAVFNEDKKLGVPSSVdlVCSDPAHLVTSFT 638
           86655445688999999****************99*****************665526788877666666665568666669******* PP
   S: 201  dgtvklwdlqtgecvrtlng 220
           +g++ l++++t + v tl+ 
   Q: 639  NGQIGLFNMETRQLVLTLES 658
           ***********999988875 PP

Organism

Takifugu rubripes

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLP GGGKGPLADG DAGEAARAHY SIPGILHFLQ HEWARFEVER 60
AQWEVERAEL QAQIAFLQGE RKGQENLKKD LVRRIKMLEY ALKQERAKFH KLKYGTELNQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCCCGGCCAT GGACGAACAG GCGGGCCCCG GCGTGTTCTT CAACAACAAC AACAACTCTG 60
TTTTACCAGG CGGCGGGAAA GGACCGCTCG CCGACGGCGA CGCGGGGGAA GCGGCGAGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

tru:101067066

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001899	Ailuropoda melanoleuca	74.50	0.00e+00	1045.00
IUUC-Apl-003927	Anas platyrhynchos	74.55	0.00e+00	923.00
IUUC-Aca-004933	Anolis carolinensis	70.36	0.00e+00	974.00
IUUC-Ame-011605	Astyanax mexicanus	78.02	0.00e+00	1137.00
IUUC-Bta-013077	Bos taurus	73.29	0.00e+00	1042.00
IUUC-Cel-018443	Caenorhabditis elegans	49.55	1.00e-102	367.00
IUUC-Cja-018973	Callithrix jacchus	73.04	0.00e+00	1039.00
IUUC-Cfa-020988	Canis familiaris	70.41	0.00e+00	921.00
IUUC-Cpo-022496	Cavia porcellus	72.91	0.00e+00	1046.00
IUUC-Csa-023829	Chlorocebus sabaeus	72.98	0.00e+00	1036.00
IUUC-Cho-024338	Choloepus hoffmanni	58.94	0.00e+00	741.00
IUUC-Cin-025167	Ciona intestinalis	46.60	6.00e-176	610.00
IUUC-Dre-028560	Danio rerio	73.89	0.00e+00	1006.00
IUUC-Dno-029742	Dasypus novemcinctus	69.24	0.00e+00	1004.00
IUUC-Dor-030721	Dipodomys ordii	67.13	0.00e+00	952.00
IUUC-Eca-033760	Equus caballus	73.77	0.00e+00	962.00
IUUC-Eeu-034953	Erinaceus europaeus	80.99	0.00e+00	639.00
IUUC-Fca-036530	Felis catus	73.77	0.00e+00	979.00
IUUC-Fal-037353	Ficedula albicollis	69.06	0.00e+00	741.00
IUUC-Gmo-039094	Gadus morhua	85.71	0.00e+00	818.00
IUUC-Gga-040132	Gallus gallus	75.67	0.00e+00	951.00
IUUC-Gac-041713	Gasterosteus aculeatus	91.12	0.00e+00	1275.00
IUUC-Ggo-045455	Gorilla gorilla	65.69	0.00e+00	890.00
IUUC-Hsa-046415	Homo sapiens	72.91	0.00e+00	1036.00
IUUC-Itr-048177	Ictidomys tridecemlineatus	65.42	0.00e+00	632.00
IUUC-Lch-050475	Latimeria chalumnae	75.41	0.00e+00	1098.00
IUUC-Loc-051859	Lepisosteus oculatus	81.61	0.00e+00	1152.00
IUUC-Laf-053537	Loxodonta africana	72.53	0.00e+00	1060.00
IUUC-Mcc-055817	Macaca mulatta	74.90	0.00e+00	1036.00
IUUC-Mla-058988	Melampsora laricipopulina	34.51	2.00e-62	234.00
IUUC-Mga-059694	Meleagris gallopavo	75.63	0.00e+00	930.00
IUUC-Mmr-060768	Microcebus murinus	73.48	0.00e+00	1046.00
IUUC-Mdo-061901	Monodelphis domestica	68.36	0.00e+00	1024.00
IUUC-Mmu-064154	Mus musculus	72.15	0.00e+00	1034.00
IUUC-Mpu-065827	Mustela putorius furo	67.97	0.00e+00	1035.00
IUUC-Mlu-067102	Myotis lucifugus	74.50	0.00e+00	1030.00
IUUC-Nle-070008	Nomascus leucogenys	74.19	0.00e+00	969.00
IUUC-Ont-072025	Oreochromis niloticus	91.42	0.00e+00	1296.00
IUUC-Oan-072950	Ornithorhynchus anatinus	74.48	0.00e+00	931.00
IUUC-Ocu-074316	Oryctolagus cuniculus	73.63	0.00e+00	952.00
IUUC-Ola-087279	Oryzias latipes	84.71	0.00e+00	1170.00
IUUC-Oga-088284	Otolemur garnettii	72.91	0.00e+00	1051.00
IUUC-Oar-090304	Ovis aries	73.04	0.00e+00	1037.00
IUUC-Ptr-091052	Pan troglodytes	73.04	0.00e+00	1038.00
IUUC-Pan-092270	Papio anubis	71.21	0.00e+00	1014.00
IUUC-Psi-093907	Pelodiscus sinensis	73.65	0.00e+00	854.00
IUUC-Pma-094286	Petromyzon marinus	66.40	0.00e+00	627.00
IUUC-Pfo-097042	Poecilia formosa	89.40	0.00e+00	1378.00
IUUC-Pab-098110	Pongo abelii	73.04	0.00e+00	1038.00
IUUC-Pca-100266	Procavia capensis	61.79	0.00e+00	706.00
IUUC-Pva-102824	Pteropus vampyrus	72.15	0.00e+00	1014.00
IUUC-Pgr-103483	Puccinia graminis	37.86	2.00e-56	214.00
IUUC-Rno-105638	Rattus norvegicus	72.15	0.00e+00	1041.00
IUUC-Sha-107004	Sarcophilus harrisii	69.60	0.00e+00	878.00
IUUC-Ssc-115280	Sus scrofa	72.80	0.00e+00	1042.00
IUUC-Tgu-116759	Taeniopygia guttata	75.07	0.00e+00	942.00
IUUC-Tsy-119405	Tarsius syrichta	65.03	0.00e+00	789.00
IUUC-Tni-120571	Tetraodon nigroviridis	95.92	0.00e+00	1381.00
IUUC-Tbe-127691	Tupaia belangeri	53.91	9.00e-144	504.00
IUUC-Ttr-128600	Tursiops truncatus	58.85	0.00e+00	799.00
IUUC-Vpa-130294	Vicugna pacos	73.74	0.00e+00	954.00
IUUC-Xtr-132330	Xenopus tropicalis	60.51	0.00e+00	905.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence