iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114643

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000764

Gene Name

SORBI_005G035700

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb05g002980	Sb05g002980.1	Sb05g002980.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	4.00e-07	31.3	237	278

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf..kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C+iCl d+  +d ++v+pC+H fh++Cl  w        ++ +CPlCr
   Q: 237  CPICLMDYvvDDDLCVMPCKHGFHHECLAGW------LARSCLCPLCR 278
           ******99**555******************......**********8 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MDDDVDMTQR LQGLLQRLTA RLSTREASAA QDHGHATQPS AVGGGRRPLA GAVVGSADDH 60
DAPRDNGGTL LPGGGHLQLL EPFEQEATSL AEVTEMLRRG LSRSDEFFDQ NQIMEFAMRL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGACG ACGTGGACAT GACCCAACGG CTCCAAGGTT TACTGCAACG GCTGACAGCA 60
CGGTTGAGTA CGAGAGAAGC AAGCGCCGCC CAAGACCATG GCCATGCAAC TCAGCCATCG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process

KEGG

sbi:SORBI_05g002980

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Dre-027662	Danio rerio	48.78	7.00e-09	55.10
IUUC-Eca-033404	Equus caballus	40.38	1.00e-12	67.40
IUUC-Ogl-077736	Oryza glaberrima	59.09	1.00e-15	76.30
IUUC-Ogu-078669	Oryza glumaepatula	57.58	2.00e-15	75.50
IUUC-Oin-080049	Oryza indica	57.58	2.00e-15	75.50
IUUC-Ome-081676	Oryza meridionalis	48.72	2.00e-15	75.90
IUUC-Oni-082200	Oryza nivara	57.58	2.00e-15	75.50
IUUC-Oru-084737	Oryza rufipogon	57.58	2.00e-15	75.50
IUUC-Tbe-127505	Tupaia belangeri	42.65	2.00e-11	63.20

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence