iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Eca-033533

UUCD1 version

UUC-EqC-00314

Ensembl Protein ID

ENSECAP00000020693.1

UniProt Accession

F6V1L0; F6V1L0_HORSE

Protein Name

Uncharacterized protein

Gene Name

RBBP4

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSECAG00000022784.1	ENSECAT00000024887.1	ENSECAP00000020693.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.20e-35	120.1	266	300

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDlrtg 33
           Ht++v+cl+f   s+ +l++Gs D+t+ +WDlr  
   Q: 266  HTAEVNCLSFnpySEFILATGSADKTVALWDLRNL 300
           **********96554568*************9875 PP

Organism

Equus caballus

Protein Sequence
(Fasta)

AAFDDAVEER VINEEYKIWK KNTPFLYDLV MTHALEWPSL TAQWLPDVTR PEGKDFSIHR 60
LVLGTHTSDE QNHLVIASVQ LPNDDAQFDA SHYDSEKGEF GGFGSVSGKI EIEIKINHEG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCAGCCTTTG ATGACGCAGT GGAAGAACGT GTGATCAACG AAGAGTACAA AATATGGAAA 60
AAGAACACCC CTTTTCTTTA CGATTTGGTG ATGACCCATG CCCTGGAGTG GCCCAGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR022052--Histone-bd_RBBP4_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF12265--CAF1C_H4-bd
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0033186--C:CAF-1 complex
GO:0005829--C:cytosol
GO:0035098--C:ESC/E(Z) complex
GO:0000790--C:nuclear chromatin
GO:0016581--C:NuRD complex
GO:0016589--C:NURF complex
GO:0008094--F:DNA-dependent ATPase activity
GO:0031492--F:nucleosomal DNA binding
GO:0000978--F:RNA polymerase II core promoter proximal region sequence-specific DNA binding
GO:0000980--F:RNA polymerase II distal enhancer sequence-specific DNA binding
GO:0043044--P:ATP-dependent chromatin remodeling
GO:0006335--P:DNA replication-dependent nucleosome assembly
GO:0006336--P:DNA replication-independent nucleosome assembly

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001339	Ailuropoda melanoleuca	97.86	0.00e+00	835.00
IUUC-Atr-003075	Amborella trichopoda	67.08	4.00e-165	574.00
IUUC-Apl-003952	Anas platyrhynchos	98.57	0.00e+00	850.00
IUUC-Aca-004508	Anolis carolinensis	98.33	0.00e+00	848.00
IUUC-Ago-007892	Ashbya gossypii	38.52	1.00e-77	283.00
IUUC-Acl-008163	Aspergillus clavatus	52.53	2.00e-122	432.00
IUUC-Afl-008645	Aspergillus flavus	52.49	2.00e-121	429.00
IUUC-Afu-009091	Aspergillus fumigatus	52.53	2.00e-122	432.00
IUUC-Ani-009478	Aspergillus nidulans	48.61	2.00e-103	369.00
IUUC-Ang-009707	Aspergillus niger	52.02	8.00e-118	417.00
IUUC-Aor-010028	Aspergillus oryzae	52.49	2.00e-121	429.00
IUUC-Ate-010416	Aspergillus terreus	50.85	2.00e-121	429.00
IUUC-Ame-010598	Astyanax mexicanus	95.70	0.00e+00	828.00
IUUC-Bgr-012001	Blumeria graminis	49.51	2.00e-106	379.00
IUUC-Bta-012851	Bos taurus	98.57	0.00e+00	850.00
IUUC-Bci-013815	Botrytis cinerea	50.12	3.00e-124	437.00
IUUC-Bdi-014926	Brachypodium distachyon	66.83	3.00e-159	554.00
IUUC-Cel-018587	Caenorhabditis elegans	72.75	0.00e+00	626.00
IUUC-Cja-019884	Callithrix jacchus	98.57	0.00e+00	850.00
IUUC-Cfa-020343	Canis familiaris	98.57	0.00e+00	850.00
IUUC-Cpo-021591	Cavia porcellus	98.57	0.00e+00	850.00
IUUC-Cre-022563	Chlamydomonas reinhardtii	61.67	5.00e-152	530.00
IUUC-Cho-024506	Choloepus hoffmanni	98.10	0.00e+00	842.00
IUUC-Cin-025589	Ciona intestinalis	88.33	0.00e+00	776.00
IUUC-Csv-026216	Ciona savignyi	89.78	0.00e+00	781.00
IUUC-Cgl-026564	Colletotrichum gloeosporioides	48.55	4.00e-117	414.00
IUUC-Cne-026792	Cryptococcus neoformans	55.14	4.00e-132	464.00
IUUC-Dre-028742	Danio rerio	95.94	0.00e+00	829.00
IUUC-Dno-029114	Dasypus novemcinctus	98.57	0.00e+00	850.00
IUUC-Dse-031282	Dothistroma septosporum	46.11	1.00e-98	353.00
IUUC-Dme-032126	Drosophila melanogaster	90.71	0.00e+00	783.00
IUUC-Ete-032731	Echinops telfairi	98.57	0.00e+00	850.00
IUUC-Eeu-034644	Erinaceus europaeus	97.30	1.00e-124	439.00
IUUC-Fca-036202	Felis catus	98.57	0.00e+00	850.00
IUUC-Fal-037084	Ficedula albicollis	98.57	0.00e+00	849.00
IUUC-Fox-037974	Fusarium oxysporum	49.88	2.00e-120	426.00
IUUC-Gmo-039214	Gadus morhua	96.16	0.00e+00	822.00
IUUC-Ggr-039741	Gaeumannomyces graminis	50.36	1.00e-117	416.00
IUUC-Gga-040396	Gallus gallus	98.57	0.00e+00	850.00
IUUC-Gac-041389	Gasterosteus aculeatus	94.74	0.00e+00	818.00
IUUC-Ggo-045422	Gorilla gorilla	90.31	0.00e+00	755.00
IUUC-Hsa-045683	Homo sapiens	98.57	0.00e+00	850.00
IUUC-Hvu-047457	Hordeum vulgare	67.18	3.00e-76	277.00
IUUC-Itr-047950	Ictidomys tridecemlineatus	98.57	0.00e+00	850.00
IUUC-Kpa-049119	Komagataella pastoris	36.45	2.00e-68	253.00
IUUC-Lpe-051337	Leersia perrieri	67.32	3.00e-160	558.00
IUUC-Loc-052473	Lepisosteus oculatus	96.42	0.00e+00	834.00
IUUC-Laf-054114	Loxodonta africana	98.57	0.00e+00	850.00
IUUC-Mcc-055648	Macaca mulatta	98.57	0.00e+00	848.00
IUUC-Meu-056490	Macropus eugenii	98.57	0.00e+00	850.00
IUUC-Mor-056947	Magnaporthe oryzae	51.44	3.00e-117	414.00
IUUC-Mpo-057602	Magnaporthe poae	49.64	6.00e-117	414.00
IUUC-Mtr-057853	Medicago truncatula	65.75	1.00e-156	545.00
IUUC-Mla-058884	Melampsora laricipopulina	51.70	1.00e-123	436.00
IUUC-Mga-059452	Meleagris gallopavo	98.57	0.00e+00	850.00
IUUC-Mmr-060678	Microcebus murinus	98.49	0.00e+00	805.00
IUUC-Mdo-062450	Monodelphis domestica	98.00	0.00e+00	808.00
IUUC-Mmu-063282	Mus musculus	98.57	0.00e+00	850.00
IUUC-Mac-065480	Musa acuminata	66.00	5.00e-157	547.00
IUUC-Mpu-066529	Mustela putorius furo	97.62	0.00e+00	842.00
IUUC-Mlu-068072	Myotis lucifugus	98.57	0.00e+00	850.00
IUUC-Nfi-068374	Neosartorya fischeri	52.53	4.00e-119	421.00
IUUC-Ncr-068794	Neurospora crassa	48.28	8.00e-115	406.00
IUUC-Nle-069577	Nomascus leucogenys	98.57	0.00e+00	850.00
IUUC-Opr-070245	Ochotona princeps	84.29	0.00e+00	685.00
IUUC-Ont-071809	Oreochromis niloticus	95.47	0.00e+00	827.00
IUUC-Oan-072839	Ornithorhynchus anatinus	98.34	0.00e+00	844.00
IUUC-Ocu-074515	Oryctolagus cuniculus	92.62	0.00e+00	736.00
IUUC-Obr-076859	Oryza brachyantha	66.91	3.00e-158	551.00
IUUC-Ogl-077920	Oryza glaberrima	66.83	9.00e-160	556.00
IUUC-Ome-081835	Oryza meridionalis	66.83	3.00e-160	558.00
IUUC-Oru-084666	Oryza rufipogon	66.83	9.00e-160	556.00
IUUC-Osa-085884	Oryza sativa	66.83	9.00e-160	556.00
IUUC-Ola-086664	Oryzias latipes	95.47	0.00e+00	826.00
IUUC-Olu-087579	Ostreococcus lucimarinus	62.44	4.00e-141	494.00
IUUC-Oga-088364	Otolemur garnettii	89.57	0.00e+00	763.00
IUUC-Oar-089652	Ovis aries	98.57	0.00e+00	850.00
IUUC-Psi-093300	Pelodiscus sinensis	98.46	0.00e+00	787.00
IUUC-Pma-094307	Petromyzon marinus	92.49	0.00e+00	797.00
IUUC-Pno-095153	Phaeosphaeria nodorum	49.02	4.00e-107	381.00
IUUC-Ppa-095800	Physcomitrella patens	66.92	2.00e-164	571.00
IUUC-Pfo-097376	Poecilia formosa	95.48	0.00e+00	825.00
IUUC-Pab-097697	Pongo abelii	98.57	0.00e+00	850.00
IUUC-Pca-100642	Procavia capensis	88.22	0.00e+00	708.00
IUUC-Ppe-101212	Prunus persica	65.28	9.00e-160	556.00
IUUC-Pva-102253	Pteropus vampyrus	98.57	0.00e+00	850.00
IUUC-Pgr-103441	Puccinia graminis	53.20	1.00e-118	419.00
IUUC-Rno-105678	Rattus norvegicus	98.57	0.00e+00	850.00
IUUC-Sce-106364	Saccharomyces cerevisiae	38.19	1.00e-71	263.00
IUUC-Sha-106663	Sarcophilus harrisii	98.57	0.00e+00	848.00
IUUC-Sja-108001	Schizosaccharomyces japonicus	47.69	7.00e-105	374.00
IUUC-Spo-108145	Schizosaccharomyces pombe	52.46	6.00e-119	420.00
IUUC-Smo-109159	Selaginella moellendorffii	64.23	3.00e-159	554.00
IUUC-Sly-111680	Solanum lycopersicum	66.25	3.00e-161	560.00
IUUC-Sbi-114637	Sorghum bicolor	67.00	4.00e-158	550.00
IUUC-Sre-114980	Sporisorium reilianum	54.05	5.00e-135	474.00
IUUC-Ssc-115711	Sus scrofa	98.46	0.00e+00	787.00
IUUC-Tgu-116925	Taeniopygia guttata	98.33	0.00e+00	848.00
IUUC-Tru-117549	Takifugu rubripes	95.25	0.00e+00	819.00
IUUC-Tni-120398	Tetraodon nigroviridis	95.01	0.00e+00	821.00
IUUC-Tca-121841	Theobroma cacao	67.00	1.00e-160	559.00
IUUC-Tae-124648	Triticum aestivum	66.09	7.00e-151	526.00
IUUC-Uma-129424	Ustilago maydis	53.83	4.00e-135	474.00
IUUC-Vda-129873	Verticillium dahliae	49.88	2.00e-124	438.00
IUUC-Vpa-130079	Vicugna pacos	98.10	0.00e+00	845.00
IUUC-Vvi-131585	Vitis vinifera	66.00	2.00e-158	551.00
IUUC-Xma-133066	Xiphophorus maculatus	95.47	0.00e+00	827.00
IUUC-Yli-134334	Yarrowia lipolytica	39.43	2.00e-79	289.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence