iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Psi-093418

Ensembl Protein ID

ENSPSIP00000019517.1

UniProt Accession

K7GGV6; K7GGV6_PELSI

Genbank Protein ID

ENSPSIP00000019517

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGCU01167750

Gene Name

LONRF3

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPSIG00000017310.1	ENSPSIT00000019608.1	ENSPSIP00000019517.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/U-box	1.20e-11	44.5	251	303
E3 activity/RING/RING	2.70e-10	40.6	16	52

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/U-box

   S: 3    peeflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlv 56
           p+++ C++ + l+ +Pv++p+G+t+  +++e++l+++ k cP++++ l+e+ l 
   Q: 251  PSDLDCSLCMRLFYEPVTTPCGHTFCLKCLERCLDHNPK-CPLCKEGLSEQCLA 303
           7899**********************************9.********998775 PP

E3 activity/RING/RING

   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C +C+  +++ p++lpCgH+f+++Cl++         +e +C lC+
   Q: 16   CRLCQGFLFE-PVSLPCGHTFCKKCLERA--------GEPLCALCQ 52
           **********.**************9666........999999996 PP

Organism

Pelodiscus sinensis

Protein Sequence
(Fasta)

XGGSLLQPRD GDLFRCRLCQ GFLFEPVSLP CGHTFCKKCL ERAGEPLCAL CQDRGAAGQP 60
LRVNVILSNL LAKWLSGQAK ASQLRHEGNL LYKEKKLQAA LQKYNEAVSL APNDHLLYSN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNCGGGGGCA GCTTGCTGCA GCCCCGCGAC GGGGATCTCT TCCGCTGCCG CCTCTGCCAG 60
GGCTTCCTCT TCGAGCCCGT CTCCCTGCCG TGCGGACACA CCTTTTGCAA GAAGTGCCTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0802--TPR repeat
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR003111--Lon_substr-bd
IPR015947--PUA-like_domain
IPR013026--TPR-contain_dom
IPR011990--TPR-like_helical_dom
IPR019734--TPR_repeat
IPR003613--Ubox_domain
IPR027370--Znf-RING_LisH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS51787--LON_N
PS50005--TPR
PS50293--TPR_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF02190--LON_substr_bdg
PF13445--zf-RING_UBOX

SMART

SM00464--LON
SM00184--RING
SM00028--TPR
SM00504--Ubox

Gene Ontology

GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001774	Ailuropoda melanoleuca	76.02	8.00e-153	533.00
IUUC-Apl-003916	Anas platyrhynchos	86.05	0.00e+00	847.00
IUUC-Bta-012872	Bos taurus	59.90	0.00e+00	651.00
IUUC-Cja-018747	Callithrix jacchus	64.30	0.00e+00	642.00
IUUC-Cfa-020101	Canis familiaris	56.88	5.00e-171	594.00
IUUC-Cpo-022041	Cavia porcellus	55.15	1.00e-165	576.00
IUUC-Cre-022730	Chlamydomonas reinhardtii	30.20	1.00e-09	56.60
IUUC-Csa-024034	Chlorocebus sabaeus	60.60	0.00e+00	659.00
IUUC-Cgl-026514	Colletotrichum gloeosporioides	32.94	3.00e-44	172.00
IUUC-Dno-029518	Dasypus novemcinctus	64.58	7.00e-124	437.00
IUUC-Dor-031132	Dipodomys ordii	58.92	0.00e+00	629.00
IUUC-Eca-033382	Equus caballus	61.69	0.00e+00	693.00
IUUC-Fca-035777	Felis catus	75.14	5.00e-150	523.00
IUUC-Fal-036730	Ficedula albicollis	81.82	0.00e+00	739.00
IUUC-Gmo-039110	Gadus morhua	56.99	3.00e-175	607.00
IUUC-Gga-041187	Gallus gallus	80.91	0.00e+00	729.00
IUUC-Gac-042201	Gasterosteus aculeatus	56.71	0.00e+00	633.00
IUUC-Ggo-045111	Gorilla gorilla	60.60	0.00e+00	655.00
IUUC-Hsa-045695	Homo sapiens	60.60	0.00e+00	657.00
IUUC-Lch-050429	Latimeria chalumnae	70.29	2.00e-173	602.00
IUUC-Laf-053434	Loxodonta africana	63.58	3.00e-178	617.00
IUUC-Mcc-055249	Macaca mulatta	73.35	2.00e-147	514.00
IUUC-Mga-060131	Meleagris gallopavo	92.81	0.00e+00	637.00
IUUC-Mmr-060749	Microcebus murinus	60.69	0.00e+00	684.00
IUUC-Mdo-062261	Monodelphis domestica	73.49	1.00e-154	540.00
IUUC-Mmu-063219	Mus musculus	59.33	0.00e+00	647.00
IUUC-Mpu-066222	Mustela putorius furo	55.90	1.00e-177	616.00
IUUC-Mlu-067769	Myotis lucifugus	58.44	0.00e+00	665.00
IUUC-Nle-069738	Nomascus leucogenys	62.92	1.00e-177	615.00
IUUC-Ont-072029	Oreochromis niloticus	56.47	1.00e-171	596.00
IUUC-Oan-073179	Ornithorhynchus anatinus	79.08	0.00e+00	660.00
IUUC-Ocu-074884	Oryctolagus cuniculus	60.26	0.00e+00	656.00
IUUC-Oga-089109	Otolemur garnettii	53.53	3.00e-167	582.00
IUUC-Oar-089903	Ovis aries	61.49	0.00e+00	679.00
IUUC-Ptr-091238	Pan troglodytes	60.26	0.00e+00	649.00
IUUC-Pan-092379	Papio anubis	73.96	8.00e-148	517.00
IUUC-Pno-094889	Phaeosphaeria nodorum	40.38	4.00e-42	165.00
IUUC-Pab-098343	Pongo abelii	73.68	6.00e-148	517.00
IUUC-Pca-100905	Procavia capensis	59.11	2.00e-148	519.00
IUUC-Pva-102242	Pteropus vampyrus	58.19	1.00e-174	606.00
IUUC-Rno-105899	Rattus norvegicus	71.39	3.00e-151	528.00
IUUC-Sha-107565	Sarcophilus harrisii	72.76	2.00e-143	503.00
IUUC-Sja-107742	Schizosaccharomyces japonicus	35.68	6.00e-31	128.00
IUUC-Spo-108344	Schizosaccharomyces pombe	32.88	2.00e-25	110.00
IUUC-Ssc-115705	Sus scrofa	61.94	0.00e+00	679.00
IUUC-Tgu-116978	Taeniopygia guttata	67.75	0.00e+00	796.00
IUUC-Tsy-118988	Tarsius syrichta	61.88	1.00e-165	575.00
IUUC-Tca-121632	Theobroma cacao	27.04	7.00e-46	177.00
IUUC-Tbe-127563	Tupaia belangeri	71.53	4.00e-112	397.00
IUUC-Ttr-128875	Tursiops truncatus	78.18	4.00e-147	514.00
IUUC-Vpa-130779	Vicugna pacos	81.94	8.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence