iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000014109.3	ENSCJAT00000058916.1	ENSCJAP00000043348.1
ENSCJAG00000014109.3	ENSCJAT00000027406.2	ENSCJAP00000025934.2
ENSCJAG00000014109.3	ENSCJAT00000027413.2	ENSCJAP00000025940.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.00e-06	29.8	687	721

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf..sd.tllvsGsdDgtikvWDlrtgv 34
           ++ vtc++f      ll +G+  g++ vWDlr++ 
   Q: 687  ESQVTCCCFspFKaFLLFAGTAHGSVVVWDLREDS 721
           578******86223569**************9886 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

RRTKDDTWKA DDLRKHLWAI QSGGSKEEKK HREKKLRKES EMDLPEHKEP RCRDPDQDAR 60
SRDRVAEVQT AKESSPGQRE RRRDTKDREK EKLKEKYREA EKSHSRGKDR EKEKDRRARK 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAAGAACCA AGGATGATAC CTGGAAGGCA GATGACCTCA GAAAACATCT CTGGGTAATT 60
ATCATAAATA GTGTAGATTG GGATCTGTGT GGGACTCGTG TGGTTTTCTT GGACCGCTTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0097546--C:ciliary base
GO:0005868--C:cytoplasmic dynein complex
GO:0070062--C:extracellular exosome
GO:0005615--C:extracellular space
GO:0031021--C:interphase microtubule organizing center
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0060271--P:cilium assembly
GO:0048704--P:embryonic skeletal system morphogenesis

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001741	Ailuropoda melanoleuca	72.39	0.00e+00	1312.00
IUUC-Apl-003689	Anas platyrhynchos	57.93	0.00e+00	785.00
IUUC-Aca-004966	Anolis carolinensis	58.65	0.00e+00	748.00
IUUC-Ame-011562	Astyanax mexicanus	43.16	2.00e-77	283.00
IUUC-Bta-013100	Bos taurus	62.76	0.00e+00	1157.00
IUUC-Cfa-020943	Canis familiaris	68.03	0.00e+00	1210.00
IUUC-Cho-024500	Choloepus hoffmanni	74.55	0.00e+00	836.00
IUUC-Dre-028530	Danio rerio	47.05	4.00e-178	618.00
IUUC-Dno-029442	Dasypus novemcinctus	70.36	0.00e+00	1217.00
IUUC-Eca-033951	Equus caballus	70.52	0.00e+00	1270.00
IUUC-Fca-036542	Felis catus	67.49	0.00e+00	1155.00
IUUC-Fal-037079	Ficedula albicollis	55.74	0.00e+00	731.00
IUUC-Gac-041396	Gasterosteus aculeatus	48.22	4.00e-161	562.00
IUUC-Ggo-045638	Gorilla gorilla	80.53	0.00e+00	1458.00
IUUC-Hsa-046371	Homo sapiens	84.96	0.00e+00	1523.00
IUUC-Itr-049031	Ictidomys tridecemlineatus	68.41	0.00e+00	1148.00
IUUC-Lch-049862	Latimeria chalumnae	51.29	0.00e+00	697.00
IUUC-Loc-052637	Lepisosteus oculatus	51.66	3.00e-173	602.00
IUUC-Laf-053470	Loxodonta africana	78.09	0.00e+00	1073.00
IUUC-Mcc-055753	Macaca mulatta	85.15	0.00e+00	1502.00
IUUC-Mga-059230	Meleagris gallopavo	53.23	0.00e+00	726.00
IUUC-Mmr-061703	Microcebus murinus	65.32	0.00e+00	1132.00
IUUC-Mmu-064346	Mus musculus	77.79	0.00e+00	1065.00
IUUC-Mpu-066650	Mustela putorius furo	65.98	0.00e+00	1112.00
IUUC-Nle-069413	Nomascus leucogenys	83.66	0.00e+00	1483.00
IUUC-Opr-071033	Ochotona princeps	76.06	0.00e+00	1088.00
IUUC-Ont-071388	Oreochromis niloticus	48.48	1.00e-176	613.00
IUUC-Oan-072714	Ornithorhynchus anatinus	54.05	0.00e+00	974.00
IUUC-Ocu-074557	Oryctolagus cuniculus	73.91	0.00e+00	1188.00
IUUC-Oga-088938	Otolemur garnettii	72.74	0.00e+00	1295.00
IUUC-Oar-090053	Ovis aries	61.26	0.00e+00	835.00
IUUC-Pan-091852	Papio anubis	82.18	0.00e+00	1386.00
IUUC-Psi-093781	Pelodiscus sinensis	61.84	0.00e+00	790.00
IUUC-Pfo-096078	Poecilia formosa	45.86	4.00e-150	525.00
IUUC-Pab-097947	Pongo abelii	86.09	0.00e+00	1519.00
IUUC-Rno-105970	Rattus norvegicus	63.68	0.00e+00	1144.00
IUUC-Tgu-117448	Taeniopygia guttata	57.23	0.00e+00	711.00
IUUC-Tni-120297	Tetraodon nigroviridis	45.44	2.00e-156	545.00
IUUC-Xtr-132946	Xenopus tropicalis	52.33	0.00e+00	648.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence