iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-098882

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Ubiquitin-conjugating enzyme family protein

Genbank Nucleotide ID

CM000342

Gene Name

POPTRDRAFT_716748; POPTR_0006s02770g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0006s02770	POPTR_0006s02770.1	POPTR_0006s02770.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E2/UBC	8.40e-38	130.4	15	148

Active Site

Position(s)	Description	Evidence
94	Glycyl thioester intermediate	{ECO:0000256\|PROSITE-ProRule:PRU00388}

Domain Profile

E2/UBC

   S: 2    lkkelkelekdppegisakpvdesdltewevlilGpedtpYeggvFkleiefpedYPfkPPkvkfltkifhPnvyenGkvClsilkeeekW 92
           l+kelk+l+++ppegi+++++d+ d+  + + i+Gp++tpYe+gvF++++ +++d+P +PPk  flt+ifhPn+ +nG++C++ lk  ++W
   Q: 15   LAKELKNLDESPPEGIKVGVNDD-DFSIIYADIEGPAGTPYENGVFRMKLLLSHDFPHSPPKGYFLTRIFHPNIASNGEICVNTLK--KDW 102
           78*********************.9************************************************************9..*** PP
   S: 93   spalsvesvllsiqsllaepnpesplneeaaellkknreeykkkvr 138
           +p l +++vl+ +  ll ep pes+lne+a ++l +n eey +++r
   Q: 103  NPSLGLRHVLTVVRCLLIEPFPESALNEQAGKMLLENYEEYARHAR 148
           *****************************************99875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MATNENLPPN VIKQLAKELK NLDESPPEGI KVGVNDDDFS IIYADIEGPA GTPYENGVFR 60
MKLLLSHDFP HSPPKGYFLT RIFHPNIASN GEICVNTLKK DWNPSLGLRH VLTVVRCLLI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AATTATTACA AATATTTTAT TTGCTTAAAT TTTCGAAAAG TTTTTATTTT TGTATTTCTT 60
TTGTTTGCAT ATAAATAAAT ACTAGCAATA AAAAAGAAAA TCTCTCTATC TCTAAAATTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0067--ATP-binding
KW-0181--Complete proteome
KW-0547--Nucleotide-binding
KW-1185--Reference proteome
KW-0833--Ubl conjugation pathway

Interpro

IPR000608--UBQ-conjugat_E2
IPR023313--UBQ-conjugating_AS
IPR016135--UBQ-conjugating_enzyme/RWD

PROSITE

PS00183--UBIQUITIN_CONJUGAT_1
PS50127--UBIQUITIN_CONJUGAT_2

Pfam

PF00179--UQ_con

Gene Ontology

GO:0005737--C:cytoplasm
GO:0005634--C:nucleus
GO:0005524--F:ATP binding
GO:0061630--F:ubiquitin protein ligase activity
GO:0031625--F:ubiquitin protein ligase binding
GO:0000209--P:protein polyubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0006s02770g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001979	Ailuropoda melanoleuca	63.33	5.00e-57	213.00
IUUC-Atr-002706	Amborella trichopoda	70.76	5.00e-92	330.00
IUUC-Aca-004432	Anolis carolinensis	62.26	2.00e-59	221.00
IUUC-Aly-005779	Arabidopsis lyrata	89.94	3.00e-98	350.00
IUUC-Ath-007162	Arabidopsis thaliana	89.39	8.00e-98	348.00
IUUC-Acl-008107	Aspergillus clavatus	37.73	1.00e-33	137.00
IUUC-Afu-009034	Aspergillus fumigatus	45.80	2.00e-33	136.00
IUUC-Ang-009649	Aspergillus niger	48.53	3.00e-35	142.00
IUUC-Ate-010468	Aspergillus terreus	54.35	3.00e-27	115.00
IUUC-Ame-010836	Astyanax mexicanus	56.36	1.00e-53	202.00
IUUC-Bta-012740	Bos taurus	63.33	1.00e-56	212.00
IUUC-Bdi-014057	Brachypodium distachyon	71.32	5.00e-90	323.00
IUUC-Bol-015087	Brassica oleracea	77.06	1.00e-97	348.00
IUUC-Bra-016867	Brassica rapa	70.82	8.00e-100	356.00
IUUC-Cja-019763	Callithrix jacchus	57.95	3.00e-58	217.00
IUUC-Cfa-020216	Canis familiaris	63.33	4.00e-57	213.00
IUUC-Cpo-021720	Cavia porcellus	58.33	2.00e-57	214.00
IUUC-Cre-022676	Chlamydomonas reinhardtii	57.62	8.00e-54	201.00
IUUC-Csa-023751	Chlorocebus sabaeus	57.39	6.00e-58	216.00
IUUC-Cho-024620	Choloepus hoffmanni	61.11	4.00e-39	152.00
IUUC-Cne-026844	Cryptococcus neoformans	45.60	2.00e-47	181.00
IUUC-Dno-029886	Dasypus novemcinctus	63.33	9.00e-57	212.00
IUUC-Dor-030440	Dipodomys ordii	62.91	5.00e-57	213.00
IUUC-Dme-031888	Drosophila melanogaster	62.09	5.00e-59	219.00
IUUC-Eca-033733	Equus caballus	62.91	1.00e-56	212.00
IUUC-Eeu-035342	Erinaceus europaeus	62.67	1.00e-55	208.00
IUUC-Fca-035964	Felis catus	61.32	5.00e-38	150.00
IUUC-Gmo-039357	Gadus morhua	59.60	4.00e-54	203.00
IUUC-Gga-040261	Gallus gallus	59.82	7.00e-38	149.00
IUUC-Gac-042593	Gasterosteus aculeatus	59.60	1.00e-53	202.00
IUUC-Gma-042876	Glycine max	85.14	1.00e-105	375.00
IUUC-Ggo-044626	Gorilla gorilla	61.36	6.00e-46	176.00
IUUC-Hsa-046058	Homo sapiens	57.39	9.00e-58	215.00
IUUC-Itr-048739	Ictidomys tridecemlineatus	62.91	8.00e-57	212.00
IUUC-Lpe-050956	Leersia perrieri	63.37	4.00e-73	266.00
IUUC-Lma-052996	Leptosphaeria maculans	51.38	1.00e-30	126.00
IUUC-Laf-053337	Loxodonta africana	63.33	1.00e-56	212.00
IUUC-Mcc-055485	Macaca mulatta	50.25	7.00e-54	202.00
IUUC-Meu-056123	Macropus eugenii	61.33	2.00e-55	207.00
IUUC-Mtr-058300	Medicago truncatula	88.65	3.00e-99	353.00
IUUC-Mla-059060	Melampsora laricipopulina	49.02	4.00e-44	170.00
IUUC-Mmr-061005	Microcebus murinus	63.33	6.00e-57	213.00
IUUC-Mdo-062979	Monodelphis domestica	64.00	1.00e-47	181.00
IUUC-Mmu-063778	Mus musculus	62.91	1.00e-56	211.00
IUUC-Mac-065490	Musa acuminata	72.79	1.00e-94	339.00
IUUC-Mpu-065829	Mustela putorius furo	62.91	2.00e-57	214.00
IUUC-Mlu-067498	Myotis lucifugus	62.42	9.00e-52	195.00
IUUC-Nle-069727	Nomascus leucogenys	62.91	1.00e-57	214.00
IUUC-Opr-071066	Ochotona princeps	62.96	2.00e-39	153.00
IUUC-Ont-072363	Oreochromis niloticus	57.89	1.00e-51	195.00
IUUC-Oan-073383	Ornithorhynchus anatinus	66.67	2.00e-42	164.00
IUUC-Ocu-074599	Oryctolagus cuniculus	65.41	1.00e-51	194.00
IUUC-Oba-075186	Oryza barthii	71.59	2.00e-92	331.00
IUUC-Obr-076104	Oryza brachyantha	72.32	2.00e-92	331.00
IUUC-Ogl-077835	Oryza glaberrima	71.59	2.00e-92	331.00
IUUC-Ogu-078690	Oryza glumaepatula	71.59	2.00e-92	331.00
IUUC-Oin-080215	Oryza indica	71.59	2.00e-92	331.00
IUUC-Olo-080816	Oryza longistaminata	71.59	2.00e-92	331.00
IUUC-Ome-081657	Oryza meridionalis	71.59	3.00e-92	330.00
IUUC-Oni-082601	Oryza nivara	71.59	1.00e-92	332.00
IUUC-Opu-083367	Oryza punctata	72.32	8.00e-93	332.00
IUUC-Oru-084477	Oryza rufipogon	71.59	1.00e-92	332.00
IUUC-Osa-086119	Oryza sativa	71.59	1.00e-92	332.00
IUUC-Ola-086702	Oryzias latipes	57.62	8.00e-53	199.00
IUUC-Olu-087576	Ostreococcus lucimarinus	60.65	7.00e-58	215.00
IUUC-Oga-088946	Otolemur garnettii	58.72	4.00e-58	216.00
IUUC-Oar-089564	Ovis aries	62.91	1.00e-56	212.00
IUUC-Ptr-090620	Pan troglodytes	57.39	7.00e-58	216.00
IUUC-Pan-092382	Papio anubis	50.25	8.00e-54	202.00
IUUC-Psi-093891	Pelodiscus sinensis	62.96	1.00e-39	153.00
IUUC-Pma-094344	Petromyzon marinus	65.33	7.00e-59	219.00
IUUC-Pno-094981	Phaeosphaeria nodorum	49.55	4.00e-27	115.00
IUUC-Ppa-095452	Physcomitrella patens	57.45	6.00e-70	256.00
IUUC-Pfo-097288	Poecilia formosa	50.26	2.00e-54	205.00
IUUC-Pab-098506	Pongo abelii	57.39	7.00e-58	216.00
IUUC-Pca-100749	Procavia capensis	63.33	5.00e-57	213.00
IUUC-Ppe-102084	Prunus persica	83.47	2.00e-111	394.00
IUUC-Pva-102755	Pteropus vampyrus	62.91	4.00e-57	213.00
IUUC-Rno-105739	Rattus norvegicus	62.91	3.00e-57	213.00
IUUC-Sit-109881	Setaria italica	78.22	2.00e-88	317.00
IUUC-Sly-111764	Solanum lycopersicum	77.86	5.00e-116	409.00
IUUC-Stu-111968	Solanum tuberosum	78.23	3.00e-116	410.00
IUUC-Sar-113093	Sorex araneus	61.26	6.00e-36	143.00
IUUC-Sbi-114015	Sorghum bicolor	71.85	4.00e-94	337.00
IUUC-Sre-115036	Sporisorium reilianum	42.11	5.00e-33	133.00
IUUC-Tru-117716	Takifugu rubripes	57.76	4.00e-54	203.00
IUUC-Tni-120210	Tetraodon nigroviridis	57.76	2.00e-54	204.00
IUUC-Tca-121315	Theobroma cacao	83.64	1.00e-126	444.00
IUUC-Tae-125572	Triticum aestivum	70.63	4.00e-91	327.00
IUUC-Tur-126669	Triticum urartu	64.96	9.00e-84	303.00
IUUC-Tbe-128157	Tupaia belangeri	64.00	4.00e-57	213.00
IUUC-Vvi-131716	Vitis vinifera	80.67	5.00e-118	416.00
IUUC-Xtr-132592	Xenopus tropicalis	63.16	2.00e-59	221.00
IUUC-Xma-133064	Xiphophorus maculatus	48.98	3.00e-48	184.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence