iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111714

Ensembl Protein ID

Solyc06g008310.2.1

UniProt Accession

K4C3L1; K4C3L1_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc06g008310.2	Solyc06g008310.2.1	Solyc06g008310.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.50e-35	119.7	679	712
UBD/Beta-Prp	1.50e-49	169.5	590	822

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtg 33
           H+  ++++++   ++ +++Gs+D+t+k+W + t 
   Q: 679  HKRIIWSCSWnpFGHEFATGSRDKTVKIWAVGTE 712
           9999******753377*************98766 PP

UBD/Beta-Prp

   S: 16   vkfspdksllatgsrdgt.....ikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvwdls.......tgkcvhtlkghe 94
           +++  d++l+a++++ ++     i +w+v ++k + +l +h+ +vt+++fs+d k+l+ +s+Dr+  v+ ++       +++ v + ++h+
   Q: 590  LCCDHDGKLVASSCKAQSapvaeIWLWQVGSWKSVGRLRSHSLTVTQMEFSHDNKYLLAVSRDRHFSVFQINhkgtdeiDYQLVAKQEAHK 680
           5666788888888887653333368899999999***********************************7777777777************ PP
   S: 95   dsvlslsfspsgdklvsGshdrtirvwdletgqclee......tlsghdgvvncvvv.....hpdgnllvsGslDrtvrlWdl........ 166
           + ++s+s++p g+ +++Gs+d+t+++w + t++ ++       +    +++v+ +++     h++  ll+ G+ ++ + lW+l        
   Q: 681  RIIWSCSWNPFGHEFATGSRDKTVKIWAVGTETSVKLlltlppF----KSSVTALSWlsldnHSNHGLLAVGMENGLIELWNLdsrggdgh 767
           ***********************************889966642....4444443332222266669************************ PP
   S: 167  ...ktgkllrtl...tgghtdsvyslsfdsng.......kelvsgsldgtvklwdl 209
              ++++   ++      h + v+ ls++  +        +l+s++ d  v+++ +
   Q: 768  lsvQNASPAVKFdpfLC-HVSTVQRLSWRNPQksedsetVQLASCGADHCVRIFRV 822
           *9988888888877676.9999*****76666666777799**********99976 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MEVERVFIGA GCNRVVNNVS WGASGLVSFG AQNAVAIFCP KTAQILTTLA GHKASVNCTL 60
WLPNSKFAFK AKQLEQHLLL SGDAEGVIIL WEYSLVDAKW RYVLQVPQVH KKGVTCITAI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAGTTTTGGG TTTATTTGGG CCTTGGAAAA TAAGATTTCT AGTGAATTGC TTCTTCTCTG 60
CTCCCGCCTT CACACCGCCG TTACCGGCAG CGAGTAAAAT CTTCGCCTCC GTCAACCTCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR023302--Pept_S9A_N
IPR027295--Quinoprotein_ADH-like_fam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	61.29	0.00e+00	988.00
IUUC-Aml-002049	Ailuropoda melanoleuca	34.23	8.00e-104	370.00
IUUC-Atr-002456	Amborella trichopoda	63.66	0.00e+00	1078.00
IUUC-Apl-004053	Anas platyrhynchos	37.92	2.00e-136	479.00
IUUC-Aca-004535	Anolis carolinensis	33.00	3.00e-111	395.00
IUUC-Aly-005746	Arabidopsis lyrata	66.27	0.00e+00	1082.00
IUUC-Ath-006664	Arabidopsis thaliana	66.11	0.00e+00	1066.00
IUUC-Ago-007971	Ashbya gossypii	29.62	1.00e-83	303.00
IUUC-Acl-008173	Aspergillus clavatus	31.51	1.00e-98	353.00
IUUC-Afl-008665	Aspergillus flavus	26.68	7.00e-35	141.00
IUUC-Afu-008976	Aspergillus fumigatus	29.93	1.00e-91	330.00
IUUC-Ani-009284	Aspergillus nidulans	29.69	4.00e-94	338.00
IUUC-Ang-009809	Aspergillus niger	29.47	2.00e-90	326.00
IUUC-Aor-009959	Aspergillus oryzae	30.87	6.00e-95	341.00
IUUC-Ate-010442	Aspergillus terreus	30.56	4.00e-96	345.00
IUUC-Ame-011409	Astyanax mexicanus	34.95	4.00e-119	421.00
IUUC-Bgr-012137	Blumeria graminis	31.94	7.00e-96	344.00
IUUC-Bta-012892	Bos taurus	35.66	5.00e-128	451.00
IUUC-Bci-013944	Botrytis cinerea	32.12	4.00e-94	338.00
IUUC-Bdi-014512	Brachypodium distachyon	62.28	0.00e+00	1043.00
IUUC-Bol-015741	Brassica oleracea	66.06	0.00e+00	1096.00
IUUC-Bra-017367	Brassica rapa	66.67	0.00e+00	1100.00
IUUC-Cel-018712	Caenorhabditis elegans	30.71	9.00e-70	257.00
IUUC-Cja-018865	Callithrix jacchus	32.42	3.00e-116	412.00
IUUC-Cfa-021006	Canis familiaris	36.02	3.00e-129	455.00
IUUC-Cpo-021370	Cavia porcellus	36.33	1.00e-129	456.00
IUUC-Csa-023845	Chlorocebus sabaeus	35.25	3.00e-126	445.00
IUUC-Cho-024640	Choloepus hoffmanni	34.06	2.00e-72	266.00
IUUC-Cin-025772	Ciona intestinalis	33.33	1.00e-103	370.00
IUUC-Csv-025891	Ciona savignyi	33.13	2.00e-108	385.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	30.26	5.00e-91	328.00
IUUC-Cne-027081	Cryptococcus neoformans	30.65	4.00e-87	315.00
IUUC-Cme-027225	Cyanidioschyzon merolae	24.65	4.00e-43	169.00
IUUC-Dre-028250	Danio rerio	36.92	4.00e-128	451.00
IUUC-Dno-028847	Dasypus novemcinctus	34.97	2.00e-128	452.00
IUUC-Dor-030351	Dipodomys ordii	34.00	5.00e-118	417.00
IUUC-Dse-031317	Dothistroma septosporum	32.17	4.00e-85	308.00
IUUC-Dme-032019	Drosophila melanogaster	34.61	3.00e-126	445.00
IUUC-Ete-033194	Echinops telfairi	34.13	6.00e-66	244.00
IUUC-Eca-033779	Equus caballus	35.67	8.00e-128	450.00
IUUC-Eeu-034790	Erinaceus europaeus	34.70	1.00e-76	280.00
IUUC-Fca-036090	Felis catus	36.45	1.00e-119	423.00
IUUC-Fal-037663	Ficedula albicollis	40.24	1.00e-122	433.00
IUUC-Fox-037828	Fusarium oxysporum	31.39	1.00e-98	353.00
IUUC-Fso-038462	Fusarium solani	32.58	6.00e-99	354.00
IUUC-Gmo-039450	Gadus morhua	33.45	2.00e-125	442.00
IUUC-Ggr-040023	Gaeumannomyces graminis	30.54	2.00e-84	306.00
IUUC-Gga-040480	Gallus gallus	38.08	3.00e-142	498.00
IUUC-Gac-041544	Gasterosteus aculeatus	35.74	2.00e-132	465.00
IUUC-Gma-044048	Glycine max	73.38	0.00e+00	1235.00
IUUC-Ggo-045381	Gorilla gorilla	32.44	6.00e-111	394.00
IUUC-Hsa-046096	Homo sapiens	32.28	7.00e-115	407.00
IUUC-Hvu-047494	Hordeum vulgare	63.42	0.00e+00	1071.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	36.07	2.00e-99	356.00
IUUC-Kpa-049241	Komagataella pastoris	29.89	4.00e-81	295.00
IUUC-Lch-050512	Latimeria chalumnae	39.20	8.00e-123	434.00
IUUC-Lpe-051448	Leersia perrieri	61.47	0.00e+00	1026.00
IUUC-Loc-051882	Lepisosteus oculatus	36.64	2.00e-138	485.00
IUUC-Lma-053023	Leptosphaeria maculans	31.79	3.00e-92	332.00
IUUC-Laf-054519	Loxodonta africana	35.82	3.00e-127	448.00
IUUC-Mcc-055580	Macaca mulatta	33.00	2.00e-116	412.00
IUUC-Meu-056606	Macropus eugenii	34.63	2.00e-40	160.00
IUUC-Mor-057109	Magnaporthe oryzae	32.00	1.00e-109	390.00
IUUC-Mpo-057297	Magnaporthe poae	29.09	2.00e-88	319.00
IUUC-Mtr-058348	Medicago truncatula	72.30	0.00e+00	1220.00
IUUC-Mla-059159	Melampsora laricipopulina	29.18	6.00e-82	298.00
IUUC-Mga-059778	Meleagris gallopavo	37.77	1.00e-79	289.00
IUUC-Mvi-060447	Microbotryum violaceum	30.34	7.00e-87	314.00
IUUC-Mmr-061139	Microcebus murinus	33.08	6.00e-118	417.00
IUUC-Mdo-061866	Monodelphis domestica	36.22	2.00e-133	469.00
IUUC-Mmu-063390	Mus musculus	35.61	1.00e-125	443.00
IUUC-Mac-064693	Musa acuminata	66.51	0.00e+00	1124.00
IUUC-Mpu-066547	Mustela putorius furo	35.20	1.00e-122	432.00
IUUC-Mlu-067156	Myotis lucifugus	35.97	5.00e-130	457.00
IUUC-Nfi-068616	Neosartorya fischeri	30.97	5.00e-93	335.00
IUUC-Ncr-068915	Neurospora crassa	30.25	2.00e-87	317.00
IUUC-Nle-069958	Nomascus leucogenys	34.84	4.00e-120	425.00
IUUC-Opr-071093	Ochotona princeps	33.67	4.00e-52	198.00
IUUC-Ont-072178	Oreochromis niloticus	35.71	4.00e-133	468.00
IUUC-Oan-073667	Ornithorhynchus anatinus	34.83	4.00e-120	424.00
IUUC-Ocu-074662	Oryctolagus cuniculus	35.87	5.00e-128	451.00
IUUC-Oba-075577	Oryza barthii	61.92	0.00e+00	1050.00
IUUC-Obr-076566	Oryza brachyantha	62.09	0.00e+00	1050.00
IUUC-Ogl-077054	Oryza glaberrima	61.97	0.00e+00	1051.00
IUUC-Ogu-078846	Oryza glumaepatula	62.04	0.00e+00	1049.00
IUUC-Oin-079084	Oryza indica	61.92	0.00e+00	1044.00
IUUC-Olo-080933	Oryza longistaminata	58.28	0.00e+00	924.00
IUUC-Ome-081500	Oryza meridionalis	59.12	0.00e+00	977.00
IUUC-Oni-082352	Oryza nivara	61.56	0.00e+00	1039.00
IUUC-Opu-084116	Oryza punctata	61.18	0.00e+00	1034.00
IUUC-Oru-085249	Oryza rufipogon	61.92	0.00e+00	1044.00
IUUC-Osa-086270	Oryza sativa	61.92	0.00e+00	1044.00
IUUC-Ola-086625	Oryzias latipes	31.95	1.00e-103	370.00
IUUC-Olu-087638	Ostreococcus lucimarinus	32.63	4.00e-91	328.00
IUUC-Oga-088634	Otolemur garnettii	35.31	2.00e-103	369.00
IUUC-Oar-089475	Ovis aries	36.14	1.00e-126	446.00
IUUC-Ptr-091131	Pan troglodytes	34.89	2.00e-124	439.00
IUUC-Pan-092869	Papio anubis	34.92	1.00e-125	443.00
IUUC-Psi-093146	Pelodiscus sinensis	39.44	3.00e-122	431.00
IUUC-Pma-094479	Petromyzon marinus	37.73	2.00e-103	369.00
IUUC-Pno-095061	Phaeosphaeria nodorum	29.09	5.00e-63	234.00
IUUC-Ppa-095618	Physcomitrella patens	50.59	0.00e+00	809.00
IUUC-Pfo-096816	Poecilia formosa	35.92	3.00e-128	451.00
IUUC-Pab-097548	Pongo abelii	34.66	6.00e-124	437.00
IUUC-Pop-099643	Populus trichocarpa	75.79	0.00e+00	1277.00
IUUC-Pca-100983	Procavia capensis	34.00	4.00e-57	215.00
IUUC-Ppe-101301	Prunus persica	75.24	0.00e+00	1266.00
IUUC-Pva-102460	Pteropus vampyrus	35.05	3.00e-122	432.00
IUUC-Pgr-103507	Puccinia graminis	29.87	1.00e-80	294.00
IUUC-Ptt-103892	Puccinia triticina	29.74	1.00e-69	256.00
IUUC-Pte-104283	Pyrenophora teres	30.22	1.00e-90	327.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	30.57	1.00e-86	313.00
IUUC-Rno-105842	Rattus norvegicus	34.86	2.00e-125	442.00
IUUC-Sce-106459	Saccharomyces cerevisiae	29.52	1.00e-81	296.00
IUUC-Sha-106586	Sarcophilus harrisii	32.21	3.00e-80	292.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	30.84	8.00e-89	320.00
IUUC-Spo-108302	Schizosaccharomyces pombe	29.30	3.00e-84	305.00
IUUC-Smo-108861	Selaginella moellendorffii	51.35	0.00e+00	802.00
IUUC-Sit-109915	Setaria italica	62.83	0.00e+00	1082.00
IUUC-Stu-112631	Solanum tuberosum	96.85	0.00e+00	1634.00
IUUC-Sar-113200	Sorex araneus	33.91	1.00e-74	273.00
IUUC-Sbi-114582	Sorghum bicolor	63.13	0.00e+00	1077.00
IUUC-Sre-115001	Sporisorium reilianum	26.36	1.00e-36	148.00
IUUC-Ssc-115519	Sus scrofa	35.51	2.00e-128	452.00
IUUC-Tgu-116987	Taeniopygia guttata	37.32	2.00e-132	466.00
IUUC-Tru-118476	Takifugu rubripes	36.09	1.00e-127	449.00
IUUC-Tsy-119230	Tarsius syrichta	37.42	7.00e-53	201.00
IUUC-Tni-120448	Tetraodon nigroviridis	34.67	2.00e-44	173.00
IUUC-Tca-121650	Theobroma cacao	72.92	0.00e+00	1248.00
IUUC-Tre-122086	Trichoderma reesei	31.44	2.00e-93	336.00
IUUC-Tvi-122397	Trichoderma virens	30.11	6.00e-86	311.00
IUUC-Tae-123972	Triticum aestivum	62.45	0.00e+00	1060.00
IUUC-Tur-126578	Triticum urartu	62.48	0.00e+00	1059.00
IUUC-Tme-126927	Tuber melanosporum	31.39	8.00e-96	344.00
IUUC-Tbe-127922	Tupaia belangeri	43.32	3.00e-43	169.00
IUUC-Ttr-128918	Tursiops truncatus	35.62	5.00e-129	454.00
IUUC-Uma-129474	Ustilago maydis	23.92	2.00e-36	147.00
IUUC-Vda-129944	Verticillium dahliae	31.96	3.00e-94	339.00
IUUC-Vpa-130693	Vicugna pacos	34.94	8.00e-120	424.00
IUUC-Vvi-130949	Vitis vinifera	75.00	0.00e+00	1281.00
IUUC-Xtr-132639	Xenopus tropicalis	33.07	3.00e-123	435.00
IUUC-Xma-134223	Xiphophorus maculatus	39.27	4.00e-86	311.00
IUUC-Yli-134601	Yarrowia lipolytica	31.88	1.00e-86	313.00
IUUC-Zma-135952	Zea mays	62.61	0.00e+00	1064.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence