iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptt-103978

Ensembl Protein ID

PTTG_08336P0

UniProt Accession

A0A180GNV8; A0A180GNV8_PUCT1

Genbank Protein ID

OAV93992.1

Protein Name

Coatomer subunit alpha

Genbank Nucleotide ID

ADAS02000044

Gene Name

PTTG_08336

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
PTTG_08336	PTTG_08336T0	PTTG_08336P0

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.30e-22	78.2	95	117
UBD/Beta-Prp	3.00e-41	140.8	87	279

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 11   f..sdtllvsGsdDgtikvWDlr 31
           f   d+++vs+s D t++vWD++
   Q: 95   FhpKDDYIVSCSMDQTVRVWDIT 117
           674459***************75 PP

UBD/Beta-Prp

   S: 137  dgvvncvvvhpdgnllvsGslDrtvrlWdl...............................ktgkllrtltgghtdsvyslsfdsngkelvsgsldg 202
            + ++++++hp+++++vs+s D+tvr+Wd+                               +t+ +++   +gh++ v++ +f+++ + +vs+++d+
   Q: 87   PHYIMYAEFHPKDDYIVSCSMDQTVRVWDItglrkktttaqpmsfedqvqransgqadlfgNTDAVVKYVLEGHDRGVNWATFHPTLPLIVSCGDDR 183
           577999******************************************************9888888888777************************ PP
   S: 203  tvklwdlqtgec..vrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhnssvisvavlsfgdnvlvlgsedskvniwklkkn 297
           +vklw +++++   v+t++gh +n++ v f+p++e+++s s+D++ir+Wd+ +++ ++t+ ++n++++  ++ +++ n +++g  d  + ++kl+++
   Q: 184  QVKLWRMSETKAweVDTCRGHFNNISAVLFHPKHELIISDSEDKTIRVWDMSKRTAVQTFRRENDRFWVLTA-HPELNLFAAG-HDTGLIVFKLDRE 278
           ********888778*********************************************************9.6666666655.4678888898877 PP
   S: 298  e 298
           +
   Q: 279  R 279
           6 PP

Organism

Puccinia triticina

Functional Description
(View)

The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network.

Protein Sequence
(Fasta)

MQMLTKVGAP GHPPARFESK SNRVKGIAFH PKLTLLAASL HSGSIQMWNF QMGTLVERFD 60
EHDGTTLPLS NILLTTNTND WPFFQGPHYI MYAEFHPKDD YIVSCSMDQT VRVWDITGLR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCAGATGC TCACCAAGGT TGGTGCACCT GGCCATCCTC CAGCGCGGGT GATATTAGAG 60
AACTAACAAC ATGCCCCCTC CTCGCCTTCC CAAATCAGTT CGAGTCCAAG TCCAACCGGG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0963--Cytoplasm
KW-0931--ER-Golgi transport
KW-0333--Golgi apparatus
KW-0472--Membrane
KW-0653--Protein transport
KW-1185--Reference proteome
KW-0813--Transport
KW-0853--WD repeat

Interpro

IPR016391--Coatomer_asu
IPR010714--Coatomer_asu_C
IPR006692--Coatomer_WD-assoc_reg
IPR020472--G-protein_beta_WD-40_rep
IPR011990--TPR-like_helical_dom
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04053--Coatomer_WDAD
PF06957--COPI_C
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0030126--C:COPI vesicle coat
GO:0000139--C:Golgi membrane
GO:0005198--F:structural molecule activity
GO:0006886--P:intracellular protein transport
GO:0016192--P:vesicle-mediated transport

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000064	Aegilops tauschii	45.03	0.00e+00	969.00
IUUC-Aml-001758	Ailuropoda melanoleuca	48.09	0.00e+00	1086.00
IUUC-Atr-002493	Amborella trichopoda	50.94	0.00e+00	807.00
IUUC-Apl-003385	Anas platyrhynchos	50.33	0.00e+00	1033.00
IUUC-Aly-006020	Arabidopsis lyrata	51.50	0.00e+00	798.00
IUUC-Ath-007360	Arabidopsis thaliana	50.76	0.00e+00	801.00
IUUC-Ago-007992	Ashbya gossypii	42.55	0.00e+00	868.00
IUUC-Acl-008027	Aspergillus clavatus	56.57	0.00e+00	915.00
IUUC-Afl-008644	Aspergillus flavus	51.81	0.00e+00	1170.00
IUUC-Afu-008964	Aspergillus fumigatus	51.67	0.00e+00	1191.00
IUUC-Ani-009379	Aspergillus nidulans	58.40	0.00e+00	932.00
IUUC-Ang-009756	Aspergillus niger	51.76	0.00e+00	1197.00
IUUC-Aor-010174	Aspergillus oryzae	51.72	0.00e+00	1167.00
IUUC-Ate-010302	Aspergillus terreus	51.37	0.00e+00	1206.00
IUUC-Ame-011229	Astyanax mexicanus	46.57	0.00e+00	1045.00
IUUC-Bgr-012300	Blumeria graminis	52.19	0.00e+00	1166.00
IUUC-Bta-012524	Bos taurus	48.37	0.00e+00	1075.00
IUUC-Bci-013781	Botrytis cinerea	52.70	0.00e+00	1187.00
IUUC-Bdi-014549	Brachypodium distachyon	44.14	0.00e+00	981.00
IUUC-Bol-015925	Brassica oleracea	51.14	0.00e+00	798.00
IUUC-Bra-016978	Brassica rapa	50.38	0.00e+00	793.00
IUUC-Cel-018115	Caenorhabditis elegans	48.17	0.00e+00	702.00
IUUC-Cja-019107	Callithrix jacchus	47.46	0.00e+00	1072.00
IUUC-Cfa-020675	Canis familiaris	48.37	0.00e+00	1091.00
IUUC-Cpo-021813	Cavia porcellus	48.42	0.00e+00	1098.00
IUUC-Cre-022969	Chlamydomonas reinhardtii	51.94	0.00e+00	818.00
IUUC-Csa-023523	Chlorocebus sabaeus	48.54	0.00e+00	1101.00
IUUC-Cho-024704	Choloepus hoffmanni	47.57	0.00e+00	670.00
IUUC-Cin-025572	Ciona intestinalis	45.76	0.00e+00	1017.00
IUUC-Csv-025864	Ciona savignyi	48.69	0.00e+00	733.00
IUUC-Cgl-026510	Colletotrichum gloeosporioides	59.48	0.00e+00	944.00
IUUC-Cne-027053	Cryptococcus neoformans	59.72	0.00e+00	1355.00
IUUC-Cme-027222	Cyanidioschyzon merolae	41.73	4.00e-147	514.00
IUUC-Dre-027421	Danio rerio	47.03	0.00e+00	1052.00
IUUC-Dno-029303	Dasypus novemcinctus	48.12	0.00e+00	1097.00
IUUC-Dor-030290	Dipodomys ordii	42.91	3.00e-120	424.00
IUUC-Dse-031543	Dothistroma septosporum	50.00	0.00e+00	1071.00
IUUC-Dme-031945	Drosophila melanogaster	48.95	0.00e+00	763.00
IUUC-Ete-032873	Echinops telfairi	48.75	0.00e+00	996.00
IUUC-Eca-033773	Equus caballus	47.09	0.00e+00	1053.00
IUUC-Eeu-034874	Erinaceus europaeus	42.97	0.00e+00	658.00
IUUC-Fca-035739	Felis catus	47.69	0.00e+00	1072.00
IUUC-Fal-037263	Ficedula albicollis	46.32	0.00e+00	1005.00
IUUC-Fox-037738	Fusarium oxysporum	51.46	0.00e+00	1186.00
IUUC-Fso-038153	Fusarium solani	52.00	0.00e+00	1190.00
IUUC-Gmo-039602	Gadus morhua	43.58	0.00e+00	939.00
IUUC-Ggr-039931	Gaeumannomyces graminis	59.06	0.00e+00	936.00
IUUC-Gga-040590	Gallus gallus	48.28	0.00e+00	1089.00
IUUC-Gac-041318	Gasterosteus aculeatus	46.73	0.00e+00	1054.00
IUUC-Gma-043894	Glycine max	45.64	0.00e+00	1003.00
IUUC-Ggo-045029	Gorilla gorilla	48.09	0.00e+00	1091.00
IUUC-Hsa-046078	Homo sapiens	48.09	0.00e+00	1090.00
IUUC-Hvu-047556	Hordeum vulgare	44.41	0.00e+00	982.00
IUUC-Itr-048881	Ictidomys tridecemlineatus	46.58	0.00e+00	752.00
IUUC-Kpa-049256	Komagataella pastoris	48.91	0.00e+00	775.00
IUUC-Lch-049706	Latimeria chalumnae	47.49	0.00e+00	1069.00
IUUC-Lpe-051316	Leersia perrieri	51.31	0.00e+00	800.00
IUUC-Loc-051867	Lepisosteus oculatus	43.43	3.00e-168	583.00
IUUC-Lma-053138	Leptosphaeria maculans	58.92	0.00e+00	927.00
IUUC-Laf-053510	Loxodonta africana	48.62	0.00e+00	1095.00
IUUC-Mcc-055836	Macaca mulatta	48.22	0.00e+00	1092.00
IUUC-Meu-056238	Macropus eugenii	49.28	1.00e-170	592.00
IUUC-Mor-057172	Magnaporthe oryzae	51.24	0.00e+00	1177.00
IUUC-Mpo-057300	Magnaporthe poae	52.14	0.00e+00	1165.00
IUUC-Mtr-058248	Medicago truncatula	45.43	0.00e+00	1001.00
IUUC-Mla-059019	Melampsora laricipopulina	80.24	0.00e+00	1879.00
IUUC-Mga-059499	Meleagris gallopavo	48.37	0.00e+00	1086.00
IUUC-Mvi-060336	Microbotryum violaceum	66.94	0.00e+00	1560.00
IUUC-Mmr-061102	Microcebus murinus	47.86	0.00e+00	1083.00
IUUC-Mdo-062594	Monodelphis domestica	48.37	0.00e+00	1100.00
IUUC-Mmu-063736	Mus musculus	47.69	0.00e+00	1088.00
IUUC-Mac-064481	Musa acuminata	40.36	6.00e-169	587.00
IUUC-Mpu-066701	Mustela putorius furo	48.33	0.00e+00	1092.00
IUUC-Mlu-067392	Myotis lucifugus	48.20	0.00e+00	1087.00
IUUC-Nfi-068270	Neosartorya fischeri	56.94	0.00e+00	921.00
IUUC-Ncr-068892	Neurospora crassa	51.60	0.00e+00	1180.00
IUUC-Nle-069634	Nomascus leucogenys	53.60	0.00e+00	676.00
IUUC-Opr-070952	Ochotona princeps	41.78	0.00e+00	634.00
IUUC-Ont-072488	Oreochromis niloticus	47.07	0.00e+00	1053.00
IUUC-Ocu-074211	Oryctolagus cuniculus	48.37	0.00e+00	1092.00
IUUC-Oba-074992	Oryza barthii	51.18	0.00e+00	799.00
IUUC-Obr-076153	Oryza brachyantha	50.66	0.00e+00	782.00
IUUC-Ogl-077364	Oryza glaberrima	51.31	0.00e+00	798.00
IUUC-Ogu-078257	Oryza glumaepatula	51.31	0.00e+00	799.00
IUUC-Oin-080029	Oryza indica	50.92	0.00e+00	798.00
IUUC-Olo-080895	Oryza longistaminata	51.54	0.00e+00	795.00
IUUC-Ome-081668	Oryza meridionalis	51.49	0.00e+00	781.00
IUUC-Oni-082874	Oryza nivara	51.31	0.00e+00	798.00
IUUC-Opu-083885	Oryza punctata	51.44	0.00e+00	799.00
IUUC-Oru-084274	Oryza rufipogon	51.18	0.00e+00	796.00
IUUC-Osa-085565	Oryza sativa	51.18	0.00e+00	796.00
IUUC-Ola-086921	Oryzias latipes	46.12	0.00e+00	1045.00
IUUC-Olu-087639	Ostreococcus lucimarinus	46.95	0.00e+00	1041.00
IUUC-Oga-087991	Otolemur garnettii	46.77	0.00e+00	1044.00
IUUC-Oar-089590	Ovis aries	48.54	0.00e+00	1095.00
IUUC-Ptr-090808	Pan troglodytes	48.09	0.00e+00	1091.00
IUUC-Pan-092475	Papio anubis	48.37	0.00e+00	1095.00
IUUC-Psi-093044	Pelodiscus sinensis	43.61	0.00e+00	776.00
IUUC-Pno-094839	Phaeosphaeria nodorum	51.54	0.00e+00	1151.00
IUUC-Ppa-095254	Physcomitrella patens	47.48	0.00e+00	1054.00
IUUC-Pfo-097493	Poecilia formosa	46.86	0.00e+00	1055.00
IUUC-Pab-098497	Pongo abelii	48.45	0.00e+00	1100.00
IUUC-Pop-100086	Populus trichocarpa	51.63	0.00e+00	809.00
IUUC-Pca-100413	Procavia capensis	44.97	2.00e-126	445.00
IUUC-Ppe-101899	Prunus persica	51.96	0.00e+00	818.00
IUUC-Pva-102126	Pteropus vampyrus	46.43	0.00e+00	1024.00
IUUC-Pgr-103376	Puccinia graminis	92.00	0.00e+00	2157.00
IUUC-Pte-104126	Pyrenophora teres	58.66	0.00e+00	920.00
IUUC-Pyt-104778	Pyrenophora triticirepentis	54.96	0.00e+00	746.00
IUUC-Rno-105428	Rattus norvegicus	47.88	0.00e+00	1094.00
IUUC-Sce-106464	Saccharomyces cerevisiae	40.95	0.00e+00	851.00
IUUC-Sha-107301	Sarcophilus harrisii	48.54	0.00e+00	1097.00
IUUC-Sja-107961	Schizosaccharomyces japonicus	46.31	0.00e+00	1046.00
IUUC-Spo-108217	Schizosaccharomyces pombe	47.73	0.00e+00	1070.00
IUUC-Ssl-108643	Sclerotinia sclerotiorum	52.74	0.00e+00	1195.00
IUUC-Smo-109582	Selaginella moellendorffii	52.60	0.00e+00	835.00
IUUC-Sit-109697	Setaria italica	51.31	0.00e+00	798.00
IUUC-Sly-111447	Solanum lycopersicum	45.35	0.00e+00	1006.00
IUUC-Stu-112564	Solanum tuberosum	44.89	0.00e+00	1008.00
IUUC-Sar-113313	Sorex araneus	42.18	0.00e+00	645.00
IUUC-Sbi-114388	Sorghum bicolor	51.18	0.00e+00	797.00
IUUC-Sre-115209	Sporisorium reilianum	63.73	0.00e+00	1070.00
IUUC-Ssc-115933	Sus scrofa	48.45	0.00e+00	1095.00
IUUC-Tgu-117109	Taeniopygia guttata	46.39	3.00e-97	346.00
IUUC-Tru-117772	Takifugu rubripes	46.76	0.00e+00	1038.00
IUUC-Tsy-119105	Tarsius syrichta	43.86	0.00e+00	984.00
IUUC-Tni-120556	Tetraodon nigroviridis	39.87	0.00e+00	801.00
IUUC-Tca-121545	Theobroma cacao	51.94	0.00e+00	820.00
IUUC-Tre-121951	Trichoderma reesei	58.71	0.00e+00	934.00
IUUC-Tvi-122359	Trichoderma virens	51.45	0.00e+00	1173.00
IUUC-Tae-125732	Triticum aestivum	44.31	0.00e+00	982.00
IUUC-Tur-126754	Triticum urartu	44.55	0.00e+00	956.00
IUUC-Tme-127170	Tuber melanosporum	54.51	0.00e+00	1241.00
IUUC-Tbe-127882	Tupaia belangeri	40.42	1.00e-76	279.00
IUUC-Ttr-128217	Tursiops truncatus	47.79	0.00e+00	1082.00
IUUC-Uma-129337	Ustilago maydis	65.08	0.00e+00	1060.00
IUUC-Vda-129828	Verticillium dahliae	50.34	0.00e+00	1134.00
IUUC-Vpa-130537	Vicugna pacos	47.36	0.00e+00	1067.00
IUUC-Vvi-130958	Vitis vinifera	51.77	0.00e+00	818.00
IUUC-Xtr-132857	Xenopus tropicalis	45.82	0.00e+00	1006.00
IUUC-Xma-133138	Xiphophorus maculatus	46.86	0.00e+00	1058.00
IUUC-Yli-134399	Yarrowia lipolytica	48.83	0.00e+00	737.00
IUUC-Zma-134855	Zea mays	54.53	0.00e+00	787.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence