iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ptr-091036

Ensembl Protein ID

ENSPTRP00000009051.4

UniProt Accession

H2Q6N7; H2Q6N7_PANTR

Genbank Protein ID

ENSPTRP00000009051

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AACZ03085244

Gene Name

NEDD1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPTRG00000005329.4	ENSPTRT00000009788.4	ENSPTRP00000009051.4

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.10e-20	72.9	83	113

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 7    tclaf.sd.tllvsGsdDgtikvWDlrtgvl 35
           tc+++ s+  +lvsG+ ++t+ +WDl++ ++
   Q: 83   TCVNLnSTsMYLVSGGLNNTVNIWDLKSKRV 113
           79999866699**************998765 PP

Organism

Pan troglodytes

Protein Sequence
(Fasta)

AVMQENLRFA SSGDDIKIWD ASSMTLVDKF NPHTSPHGIS SICWSSNNNF LVTASSSGDK 60
IVISSCKCKP VPLLELAEGQ KQTCVNLNST SMYLVSGGLN NTVNIWDLKS KRVHRSLKDH 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGGCGCAGTC ATGCAGGAAA ACCTCAGATT TGCTTCATCA GGAGATGATA TTAAAATATG 60
GGATGCTTCA TCTATGACAT TGGTGGATAA ATTCAACCCA CACACATCAC CACATGGAAT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0045177--C:apical part of cell
GO:0005814--C:centriole
GO:0036064--C:ciliary basal body
GO:0000242--C:pericentriolar material
GO:0000922--C:spindle pole
GO:0071539--P:protein localization to centrosome

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000871	Aegilops tauschii	37.50	3.00e-17	84.30
IUUC-Aml-002397	Ailuropoda melanoleuca	90.33	0.00e+00	1209.00
IUUC-Atr-002464	Amborella trichopoda	30.51	5.00e-39	156.00
IUUC-Apl-003870	Anas platyrhynchos	65.53	0.00e+00	868.00
IUUC-Aca-004925	Anolis carolinensis	60.42	0.00e+00	787.00
IUUC-Aly-005931	Arabidopsis lyrata	29.63	6.00e-40	159.00
IUUC-Ath-006681	Arabidopsis thaliana	28.47	1.00e-39	158.00
IUUC-Ame-010906	Astyanax mexicanus	45.02	3.00e-152	531.00
IUUC-Bta-013389	Bos taurus	90.45	0.00e+00	1204.00
IUUC-Bdi-014340	Brachypodium distachyon	28.96	1.00e-39	157.00
IUUC-Bol-015773	Brassica oleracea	32.49	4.00e-40	159.00
IUUC-Bra-016623	Brassica rapa	30.08	5.00e-40	160.00
IUUC-Cja-019541	Callithrix jacchus	95.61	0.00e+00	1283.00
IUUC-Cfa-021218	Canis familiaris	89.58	0.00e+00	1194.00
IUUC-Cpo-021697	Cavia porcellus	83.81	0.00e+00	1127.00
IUUC-Csa-023620	Chlorocebus sabaeus	97.58	0.00e+00	1313.00
IUUC-Cho-025105	Choloepus hoffmanni	84.56	0.00e+00	931.00
IUUC-Cin-025293	Ciona intestinalis	30.21	4.00e-70	258.00
IUUC-Csv-026234	Ciona savignyi	35.88	4.00e-51	194.00
IUUC-Dre-028251	Danio rerio	62.54	3.00e-104	372.00
IUUC-Dno-029281	Dasypus novemcinctus	87.82	0.00e+00	976.00
IUUC-Dor-031020	Dipodomys ordii	74.76	3.00e-174	605.00
IUUC-Ete-033113	Echinops telfairi	85.90	0.00e+00	688.00
IUUC-Eca-034230	Equus caballus	91.23	0.00e+00	1197.00
IUUC-Eeu-034671	Erinaceus europaeus	74.91	0.00e+00	799.00
IUUC-Fca-035775	Felis catus	91.06	0.00e+00	1223.00
IUUC-Fal-037557	Ficedula albicollis	63.07	0.00e+00	783.00
IUUC-Gmo-038586	Gadus morhua	58.75	2.00e-101	362.00
IUUC-Gga-040153	Gallus gallus	64.60	0.00e+00	863.00
IUUC-Gac-041385	Gasterosteus aculeatus	42.97	3.00e-136	479.00
IUUC-Gma-043049	Glycine max	31.32	4.00e-42	166.00
IUUC-Ggo-044576	Gorilla gorilla	99.09	0.00e+00	1355.00
IUUC-Hsa-046198	Homo sapiens	99.24	0.00e+00	1357.00
IUUC-Hvu-047794	Hordeum vulgare	37.50	1.00e-17	82.40
IUUC-Lch-050561	Latimeria chalumnae	50.98	7.00e-165	573.00
IUUC-Lpe-051469	Leersia perrieri	30.82	6.00e-37	149.00
IUUC-Loc-052816	Lepisosteus oculatus	48.66	9.00e-156	543.00
IUUC-Laf-053880	Loxodonta africana	88.05	0.00e+00	1130.00
IUUC-Mcc-054977	Macaca mulatta	97.27	0.00e+00	1310.00
IUUC-Meu-056141	Macropus eugenii	62.66	4.00e-177	614.00
IUUC-Mtr-058441	Medicago truncatula	31.25	5.00e-41	162.00
IUUC-Mga-060141	Meleagris gallopavo	62.61	0.00e+00	825.00
IUUC-Mmr-061201	Microcebus murinus	91.97	0.00e+00	1250.00
IUUC-Mdo-061855	Monodelphis domestica	73.47	0.00e+00	963.00
IUUC-Mmu-064342	Mus musculus	85.15	0.00e+00	1142.00
IUUC-Mac-065368	Musa acuminata	29.43	1.00e-39	158.00
IUUC-Mpu-066191	Mustela putorius furo	90.30	0.00e+00	1204.00
IUUC-Mlu-067310	Myotis lucifugus	88.18	0.00e+00	1166.00
IUUC-Nle-069990	Nomascus leucogenys	98.79	0.00e+00	1349.00
IUUC-Opr-070336	Ochotona princeps	82.27	0.00e+00	1057.00
IUUC-Ont-071675	Oreochromis niloticus	45.05	1.00e-142	500.00
IUUC-Oan-072772	Ornithorhynchus anatinus	71.15	0.00e+00	793.00
IUUC-Ocu-074095	Oryctolagus cuniculus	91.24	0.00e+00	1228.00
IUUC-Oba-075327	Oryza barthii	29.04	6.00e-38	152.00
IUUC-Obr-076119	Oryza brachyantha	28.65	1.00e-38	154.00
IUUC-Ogl-077820	Oryza glaberrima	28.09	3.00e-37	150.00
IUUC-Ogu-078679	Oryza glumaepatula	28.57	8.00e-38	152.00
IUUC-Oin-079891	Oryza indica	29.13	4.00e-38	153.00
IUUC-Olo-080414	Oryza longistaminata	31.11	6.00e-37	149.00
IUUC-Ome-081888	Oryza meridionalis	28.65	3.00e-38	153.00
IUUC-Oni-082417	Oryza nivara	28.37	5.00e-38	152.00
IUUC-Opu-083393	Oryza punctata	28.37	3.00e-38	153.00
IUUC-Oru-084698	Oryza rufipogon	29.13	3.00e-38	154.00
IUUC-Osa-086121	Oryza sativa	28.37	5.00e-38	152.00
IUUC-Ola-086806	Oryzias latipes	40.39	1.00e-140	493.00
IUUC-Olu-087591	Ostreococcus lucimarinus	23.91	5.00e-16	79.00
IUUC-Oga-088622	Otolemur garnettii	89.73	0.00e+00	1216.00
IUUC-Oar-090391	Ovis aries	87.34	0.00e+00	1038.00
IUUC-Pan-092576	Papio anubis	97.58	0.00e+00	1315.00
IUUC-Psi-093450	Pelodiscus sinensis	68.51	0.00e+00	889.00
IUUC-Pma-094101	Petromyzon marinus	55.45	2.00e-104	371.00
IUUC-Ppa-095636	Physcomitrella patens	31.72	1.00e-41	165.00
IUUC-Pfo-097142	Poecilia formosa	58.67	8.00e-108	384.00
IUUC-Pab-097829	Pongo abelii	98.48	0.00e+00	1342.00
IUUC-Pop-098972	Populus trichocarpa	32.59	1.00e-39	157.00
IUUC-Pca-100217	Procavia capensis	85.30	0.00e+00	714.00
IUUC-Ppe-101502	Prunus persica	30.79	6.00e-40	159.00
IUUC-Pva-102736	Pteropus vampyrus	88.79	0.00e+00	1183.00
IUUC-Rno-104977	Rattus norvegicus	85.61	0.00e+00	1101.00
IUUC-Sha-107003	Sarcophilus harrisii	73.92	0.00e+00	969.00
IUUC-Smo-109328	Selaginella moellendorffii	30.03	4.00e-42	166.00
IUUC-Sit-109796	Setaria italica	28.30	5.00e-39	155.00
IUUC-Sly-110941	Solanum lycopersicum	30.94	9.00e-37	148.00
IUUC-Stu-112314	Solanum tuberosum	30.94	2.00e-37	150.00
IUUC-Sar-112926	Sorex araneus	82.42	0.00e+00	1102.00
IUUC-Sbi-113822	Sorghum bicolor	28.80	5.00e-27	115.00
IUUC-Ssc-116242	Sus scrofa	91.69	0.00e+00	663.00
IUUC-Tgu-116765	Taeniopygia guttata	64.56	0.00e+00	808.00
IUUC-Tru-117738	Takifugu rubripes	42.46	1.00e-151	530.00
IUUC-Tsy-118856	Tarsius syrichta	86.83	0.00e+00	1105.00
IUUC-Tni-120871	Tetraodon nigroviridis	43.61	4.00e-149	521.00
IUUC-Tca-120965	Theobroma cacao	30.59	2.00e-39	157.00
IUUC-Tae-124830	Triticum aestivum	27.96	3.00e-39	157.00
IUUC-Tur-126840	Triticum urartu	27.69	8.00e-39	155.00
IUUC-Ttr-128551	Tursiops truncatus	88.64	0.00e+00	1172.00
IUUC-Vpa-130324	Vicugna pacos	90.61	0.00e+00	1187.00
IUUC-Vvi-131699	Vitis vinifera	31.75	1.00e-39	158.00
IUUC-Xtr-131956	Xenopus tropicalis	60.67	0.00e+00	818.00
IUUC-Xma-132982	Xiphophorus maculatus	41.58	1.00e-135	476.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence