iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099962

Ensembl Protein ID

POPTR_0010s07510.1

UniProt Accession

B9HSV2; B9HSV2_POPTR

Genbank Protein ID

EEF01763.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000346

Gene Name

POPTRDRAFT_880825; POPTR_0010s07510g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0010s07510	POPTR_0010s07510.1	POPTR_0010s07510.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.90e-26	90.1	325	362
UBD/Beta-Prp	1.60e-43	150.1	271	488

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWDlrtgvll 36
           gH+  v++++f +d   ++++++D++ik WD+ tg ++
   Q: 325  GHSKAVRDISFcNDgSKFLTAGYDKNIKYWDTETGQVI 362
           8***********99999***************999765 PP

UBD/Beta-Prp

   S: 40   ttgkllrslsgheaevtavkfspdgk.ilvtgseDrtikvwdl.stgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqc 128
            ++ l+++ sgh+++v+a++f p+   ++++++ D  +k+wd+ ++gkc++t+ gh++ v+++sf+ +g+k+++++ d+ i+ wd+etgq+
   Q: 271  IPKRLVHTWSGHTKGVSAIRFFPKHGhLILSAGMDTKVKIWDVfNSGKCMRTYMGHSKAVRDISFCNDGSKFLTAGYDKNIKYWDTETGQV 361
           5678999*************98876669*************862699******************************************** PP
   S: 129  leetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktgkllrtltgghtdsvyslsfdsngkelvsgsldgtvklwdlqtgecvrtl 218
           ++++ +g+   v  ++ ++d+ n+l +G+ D+++  Wd++tg++ ++  + h ++v+ ++f +n +++v+ s+d+++++w++    +++  
   Q: 362  ISSFSTGKIPYVVKLNPDDDKqNILLAGMSDKKIVQWDMNTGQITQEYDQ-HLGAVNTITFVDNNRRFVTSSDDKSLRVWEFGIPVVIKYI 451
           **99999999999999999999**************************98.*******************************988777665 PP
   S: 219  ng.htdnvksvrfspnderlvsgssDgsiriWdlrsg 254
            + h   + s+ ++pn ++l+  s D++i i+ +r +
   Q: 452  SEpHMHSMPSISLHPNMNWLAAQSLDNQILIYSTRER 488
           55699**************************977665 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MDLLQNYQND GELDQNPNSS PDSSPPRLLP SKSAAPKVDD TMLALTVANQ MLSKPIDPVQ 60
HVVAFNPTYD QLWAPVLGPA HPYAKDGIAQ GMRNHKLGFV EDAAIDSFVF DEQYNTFHKY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CAAAAACACG AGACAGCAAC AGCACCACCA GCAGCAGCAA TTTCCTTTCC TTTCACTATT 60
TTAATTTTCC CTTCGCGTTT CCAGAAAAGT AAAAGCTCCT CCCTCCAGTC TTGGATCCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR032847--PRPF17
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0071013--C:catalytic step 2 spliceosome
GO:0000398--P:mRNA splicing, via spliceosome

KEGG

pop:POPTR_0010s07510g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000473	Aegilops tauschii	72.81	0.00e+00	805.00
IUUC-Atr-002502	Amborella trichopoda	82.60	0.00e+00	923.00
IUUC-Aca-004854	Anolis carolinensis	36.45	5.00e-92	331.00
IUUC-Aly-006158	Arabidopsis lyrata	81.35	0.00e+00	917.00
IUUC-Ath-007474	Arabidopsis thaliana	81.00	0.00e+00	907.00
IUUC-Ani-009323	Aspergillus nidulans	41.51	1.00e-105	376.00
IUUC-Ame-011660	Astyanax mexicanus	50.66	8.00e-156	543.00
IUUC-Bgr-012230	Blumeria graminis	39.89	1.00e-110	392.00
IUUC-Bdi-014199	Brachypodium distachyon	73.16	0.00e+00	806.00
IUUC-Bol-015695	Brassica oleracea	80.97	0.00e+00	929.00
IUUC-Bra-017923	Brassica rapa	80.76	0.00e+00	942.00
IUUC-Cel-018535	Caenorhabditis elegans	39.66	2.00e-128	452.00
IUUC-Cre-022594	Chlamydomonas reinhardtii	50.74	7.00e-95	339.00
IUUC-Cho-024676	Choloepus hoffmanni	48.02	2.00e-143	501.00
IUUC-Cin-025229	Ciona intestinalis	50.00	1.00e-150	526.00
IUUC-Csv-025868	Ciona savignyi	66.30	2.00e-36	142.00
IUUC-Cne-026885	Cryptococcus neoformans	47.56	2.00e-135	475.00
IUUC-Dno-029815	Dasypus novemcinctus	49.16	5.00e-148	517.00
IUUC-Dor-030978	Dipodomys ordii	51.19	1.00e-133	469.00
IUUC-Eeu-034471	Erinaceus europaeus	41.78	1.00e-105	376.00
IUUC-Fal-036774	Ficedula albicollis	51.60	1.00e-159	555.00
IUUC-Ggr-039764	Gaeumannomyces graminis	37.03	3.00e-104	371.00
IUUC-Gma-044299	Glycine max	83.36	0.00e+00	881.00
IUUC-Lpe-051153	Leersia perrieri	74.13	0.00e+00	826.00
IUUC-Loc-052467	Lepisosteus oculatus	50.38	2.00e-157	548.00
IUUC-Mpo-057533	Magnaporthe poae	48.64	3.00e-105	375.00
IUUC-Mtr-057950	Medicago truncatula	82.45	0.00e+00	934.00
IUUC-Mla-058910	Melampsora laricipopulina	44.79	7.00e-140	490.00
IUUC-Mvi-060349	Microbotryum violaceum	43.27	3.00e-136	478.00
IUUC-Mdo-062118	Monodelphis domestica	51.23	2.00e-158	551.00
IUUC-Mac-065109	Musa acuminata	78.26	0.00e+00	845.00
IUUC-Opr-070685	Ochotona princeps	49.05	2.00e-148	518.00
IUUC-Ont-071680	Oreochromis niloticus	51.51	3.00e-158	551.00
IUUC-Oba-075625	Oryza barthii	74.01	0.00e+00	830.00
IUUC-Obr-076510	Oryza brachyantha	72.46	0.00e+00	834.00
IUUC-Ogl-077275	Oryza glaberrima	74.01	0.00e+00	830.00
IUUC-Ogu-078563	Oryza glumaepatula	74.01	0.00e+00	830.00
IUUC-Olo-081080	Oryza longistaminata	73.61	0.00e+00	748.00
IUUC-Oni-083121	Oryza nivara	74.01	0.00e+00	830.00
IUUC-Opu-083329	Oryza punctata	74.32	0.00e+00	827.00
IUUC-Oru-084807	Oryza rufipogon	73.12	0.00e+00	734.00
IUUC-Osa-086039	Oryza sativa	74.05	0.00e+00	832.00
IUUC-Ola-087149	Oryzias latipes	51.89	3.00e-160	558.00
IUUC-Ppa-095386	Physcomitrella patens	75.81	0.00e+00	884.00
IUUC-Pfo-096139	Poecilia formosa	50.94	1.00e-156	546.00
IUUC-Pca-100876	Procavia capensis	43.75	5.00e-124	437.00
IUUC-Ppe-101777	Prunus persica	85.53	0.00e+00	945.00
IUUC-Pgr-103456	Puccinia graminis	49.17	7.00e-148	516.00
IUUC-Ptt-103731	Puccinia triticina	47.55	7.00e-137	480.00
IUUC-Spo-108331	Schizosaccharomyces pombe	37.62	7.00e-105	374.00
IUUC-Ssl-108530	Sclerotinia sclerotiorum	41.10	1.00e-99	356.00
IUUC-Smo-109326	Selaginella moellendorffii	63.14	0.00e+00	694.00
IUUC-Sit-110446	Setaria italica	74.36	0.00e+00	811.00
IUUC-Sly-111330	Solanum lycopersicum	83.78	0.00e+00	917.00
IUUC-Stu-112610	Solanum tuberosum	82.50	0.00e+00	926.00
IUUC-Sbi-114005	Sorghum bicolor	74.31	0.00e+00	793.00
IUUC-Sre-114988	Sporisorium reilianum	46.15	2.00e-139	488.00
IUUC-Tgu-116493	Taeniopygia guttata	51.98	2.00e-161	561.00
IUUC-Tru-118489	Takifugu rubripes	50.84	5.00e-157	547.00
IUUC-Tni-120202	Tetraodon nigroviridis	49.25	4.00e-151	527.00
IUUC-Tca-121429	Theobroma cacao	86.54	0.00e+00	973.00
IUUC-Tae-125557	Triticum aestivum	73.95	0.00e+00	818.00
IUUC-Tur-126554	Triticum urartu	74.04	0.00e+00	814.00
IUUC-Tme-126919	Tuber melanosporum	44.19	5.00e-131	460.00
IUUC-Uma-129622	Ustilago maydis	45.77	2.00e-141	495.00
IUUC-Vvi-131238	Vitis vinifera	89.95	0.00e+00	969.00
IUUC-Xtr-131865	Xenopus tropicalis	49.64	1.00e-156	545.00
IUUC-Xma-133627	Xiphophorus maculatus	50.75	7.00e-156	543.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence