iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Xma-133846

Ensembl Protein ID

ENSXMAP00000006484.1

UniProt Accession

M3ZW90; M3ZW90_XIPMA

Genbank Protein ID

ENSXMAP00000006484

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AGAJ01000764

Gene Name

STRN (1 of many)

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSXMAG00000006457.1	ENSXMAT00000006492.1	ENSXMAP00000006484.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.60e-28	97.6	573	603
UBD/Beta-Prp	3.30e-48	164.4	464	655

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sd.tllvsGsdDgtikvWD 29
           gHtdsv++l + s   +l+s+s Dgt+++WD
   Q: 573  GHTDSVWGLVYsSAhQRLLSCSADGTVRLWD 603
           8********99743689************** PP

UBD/Beta-Prp

   S: 47   slsgheaevtavkfspdgkilvtgseDrtikvwdls...........tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdle 124
           +l +h ++++a++f+p +++l+t+seD+t+k w+l+           + ++++t+++h   vls+ +s +g+   sG+ d ti++w+++
   Q: 464  TLRSHFDGIRALTFHPVEPVLITASEDHTLKMWNLQktapakkstslDVEPIYTFRAHRGAVLSVVMSSTGEQCFSGGVDGTIQCWNTP 552
           7999**********************************************************************************998 PP
   S: 125  tgqclee..........tlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgk.llrtltgghtdsvysls..fdsngkelvsgsl 200
           +                 lsgh+++v+++v+++  + l s+s+D+tvrlWd +t +  l  + ++++  v s    + s+  +lv+  +
   Q: 553  NPNIDPYdsydpsvlrgELSGHTDSVWGLVYSSAHQRLLSCSADGTVRLWDANTTSpSLAVFNENKKLGVSSSVdlVCSEPAHLVTSFT 641
           876554466889**999****************99*****************65542789999878877877778988888******** PP
   S: 201  dgtvklwdlqtgec 214
           +g++ l++++t + 
   Q: 642  NGQIGLFNMETRQL 655
           *********98865 PP

Organism

Xiphophorus maculatus

Protein Sequence
(Fasta)

MDEQAGPGVF FNNNNNSVLA GGGKGPLPDG DAGEAARAQY SIPGILHFLQ HEWARFEVER 60
AQWEVERAEL QLFVGFLARI RKSKLSLDAD IIQNFQMYQC TSAHHRAVHR KKKYHALPCN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGACGAAC AGGCAGGGCC CGGCGTGTTC TTCAACAACA ATAACAACTC TGTTTTAGCC 60
GGCGGTGGGA AAGGACCGCT GCCCGATGGC GACGCTGGGG AGGCGGCCAG GGCGCAGTAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR013258--Striatin_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF08232--Striatin
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Acl-008170	Aspergillus clavatus	26.51	6.00e-30	126.00
IUUC-Ame-011605	Astyanax mexicanus	68.18	0.00e+00	962.00
IUUC-Cel-018443	Caenorhabditis elegans	49.55	7.00e-102	364.00
IUUC-Csv-026143	Ciona savignyi	58.02	2.00e-128	452.00
IUUC-Dor-030721	Dipodomys ordii	61.48	0.00e+00	848.00
IUUC-Eeu-034953	Erinaceus europaeus	79.95	0.00e+00	637.00
IUUC-Fal-037353	Ficedula albicollis	66.40	0.00e+00	711.00
IUUC-Gmo-039094	Gadus morhua	72.39	0.00e+00	649.00
IUUC-Gac-041713	Gasterosteus aculeatus	79.97	0.00e+00	1092.00
IUUC-Itr-048177	Ictidomys tridecemlineatus	64.77	0.00e+00	629.00
IUUC-Meu-055946	Macropus eugenii	59.86	2.00e-160	559.00
IUUC-Mor-057148	Magnaporthe oryzae	45.07	3.00e-17	84.00
IUUC-Mla-058988	Melampsora laricipopulina	34.78	1.00e-62	234.00
IUUC-Ncr-068831	Neurospora crassa	40.59	1.00e-21	98.60
IUUC-Ont-072025	Oreochromis niloticus	82.82	0.00e+00	1144.00
IUUC-Oan-072950	Ornithorhynchus anatinus	70.04	0.00e+00	841.00
IUUC-Ola-087279	Oryzias latipes	75.29	0.00e+00	1016.00
IUUC-Pma-094286	Petromyzon marinus	64.84	4.00e-177	614.00
IUUC-Pfo-097042	Poecilia formosa	89.92	0.00e+00	1348.00
IUUC-Pgr-103483	Puccinia graminis	36.42	3.00e-55	211.00
IUUC-Ptt-103828	Puccinia triticina	34.77	1.00e-43	172.00
IUUC-Tru-117944	Takifugu rubripes	80.58	0.00e+00	1108.00
IUUC-Tni-120571	Tetraodon nigroviridis	79.29	0.00e+00	1115.00
IUUC-Tbe-127691	Tupaia belangeri	53.89	1.00e-143	503.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence