iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cin-025524

Ensembl Protein ID

ENSCINP00000010883.3

UniProt Accession

F6UHI7; F6UHI7_CIOIN

Genbank Protein ID

ENSCINP00000010883

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

EAAA01001428

Gene Name

LOC100183873

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCING00000005282.3	ENSCINT00000010883.3	ENSCINP00000010883.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.00e-25	87.0	65	104
UBD/Beta-Prp	4.10e-40	137.6	60	270

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.....sdtllvsGsdDgtikvWDlrtgvllk 37
           gH d+v+cl+      s  +l sGs Dg i+ W+l+   +++
   Q: 65   GHRDGVCCLCKhrkrlS--YLFSGSCDGEIRQWNLTNRQCIR 104
           8*******963575433..9***************9988876 PP

UBD/Beta-Prp

   S: 87   vhtlkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllrt 174
           + +l gh d v++l  ++++ ++l sGs d  ir w+l ++qc++ tl+gh+g+v++++ +pdg+ ++s ++D+tv+ W++   +  r+
   Q: 60   LASLDGHRDGVCCLCKHRKRlSYLFSGSCDGEIRQWNLTNRQCIR-TLQGHTGFVRGLACSPDGKRFISVGDDKTVKHWNSDPLSEERD 147
           56899********99999777************************.*********************************8833333333 PP
   S: 175  ltgghtdsvysls.......fdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfs.pnderlvsgssDgsiriWdlrsgd 255
                  +++ +        +d+  ++ +++ + ++v +w+++++e vr ++   d ++sv+f   ++++ +s+ sD+sir++d+r   
   Q: 148  I------PINTVVakslytgVDHHWTDSIYATCGQSVDIWNMERSEPVRVYKWGMDSIQSVKFNpVETNLCISTVSDRSIRLYDIRAAV 230
           3......33333333344668888899*************************************55778899999************** PP
   S: 256  llktlqlhnssvisvavlsfgdnvlvlgse.dskvniwklkk 296
           +l++++l+    + vav+++ + + +++++ d ++ +++++k
   Q: 231  PLNKVTLKL--RSNVAVWNPMEAYNFTAANeDHNLYTFDMRK 270
           *******55..6777777777665555555599999998876 PP

Organism

Ciona intestinalis

Protein Sequence
(Fasta)

TMKVKVLSRN PDDYLRETKR DIHKVFRNYN PVLHPFEAPR EYMRALNATK LDRVFAKPFL 60
ASLDGHRDGV CCLCKHRKRL SYLFSGSCDG EIRQWNLTNR QCIRTLQGHT GFVRGLACSP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGCCGCATGT GTGCCGTGTG GTGTACTGTA GTTTGTATAA TGTACATCTC AAATTAAAGT 60
GGTAAGTTTG CACGTGTAAT CGTTTTATTT ACTTTTGTGA TTTTTAAGGT ACTAAACGTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR007287--Sof1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04158--Sof1
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0080008--C:Cul4-RING E3 ubiquitin ligase complex
GO:0005730--C:nucleolus
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-002178	Ailuropoda melanoleuca	61.99	7.00e-169	585.00
IUUC-Atr-002799	Amborella trichopoda	49.22	4.00e-133	466.00
IUUC-Apl-003675	Anas platyrhynchos	62.97	2.00e-162	563.00
IUUC-Aca-004792	Anolis carolinensis	62.90	5.00e-173	598.00
IUUC-Aly-005998	Arabidopsis lyrata	49.67	9.00e-135	471.00
IUUC-Ath-007526	Arabidopsis thaliana	49.89	2.00e-134	471.00
IUUC-Ago-007774	Ashbya gossypii	43.51	4.00e-110	390.00
IUUC-Acl-008024	Aspergillus clavatus	43.90	2.00e-108	384.00
IUUC-Afu-008930	Aspergillus fumigatus	42.38	5.00e-103	366.00
IUUC-Ani-009370	Aspergillus nidulans	43.75	2.00e-105	374.00
IUUC-Ang-009827	Aspergillus niger	43.39	1.00e-106	378.00
IUUC-Aor-010060	Aspergillus oryzae	43.49	1.00e-101	362.00
IUUC-Ate-010434	Aspergillus terreus	45.18	1.00e-90	325.00
IUUC-Ame-011967	Astyanax mexicanus	60.50	7.00e-166	575.00
IUUC-Bgr-011989	Blumeria graminis	43.53	2.00e-105	374.00
IUUC-Bta-013291	Bos taurus	46.97	2.00e-116	410.00
IUUC-Bci-013868	Botrytis cinerea	41.93	5.00e-103	366.00
IUUC-Bdi-014343	Brachypodium distachyon	48.44	3.00e-125	440.00
IUUC-Bol-015740	Brassica oleracea	46.33	8.00e-121	425.00
IUUC-Bra-016689	Brassica rapa	46.33	3.00e-120	424.00
IUUC-Cel-018536	Caenorhabditis elegans	50.36	9.00e-121	425.00
IUUC-Cja-018779	Callithrix jacchus	62.90	8.00e-174	601.00
IUUC-Cfa-020105	Canis familiaris	63.35	5.00e-174	602.00
IUUC-Cpo-021538	Cavia porcellus	62.44	6.00e-169	585.00
IUUC-Cre-022798	Chlamydomonas reinhardtii	54.72	4.00e-48	182.00
IUUC-Csa-023492	Chlorocebus sabaeus	63.35	3.00e-173	600.00
IUUC-Cho-024497	Choloepus hoffmanni	53.16	6.00e-98	349.00
IUUC-Csv-026197	Ciona savignyi	87.07	0.00e+00	823.00
IUUC-Cgl-026745	Colletotrichum gloeosporioides	42.32	4.00e-96	343.00
IUUC-Cne-026840	Cryptococcus neoformans	32.69	2.00e-64	240.00
IUUC-Cme-027111	Cyanidioschyzon merolae	33.02	1.00e-66	245.00
IUUC-Dre-027471	Danio rerio	62.27	9.00e-169	585.00
IUUC-Dno-029790	Dasypus novemcinctus	61.94	2.00e-135	473.00
IUUC-Dor-030971	Dipodomys ordii	57.09	2.00e-89	321.00
IUUC-Dse-031563	Dothistroma septosporum	42.06	3.00e-100	357.00
IUUC-Dme-032161	Drosophila melanogaster	55.53	2.00e-147	513.00
IUUC-Ete-033127	Echinops telfairi	60.59	1.00e-164	572.00
IUUC-Eca-033531	Equus caballus	62.95	6.00e-163	565.00
IUUC-Eeu-034663	Erinaceus europaeus	55.63	1.00e-143	501.00
IUUC-Fca-036258	Felis catus	63.12	2.00e-173	600.00
IUUC-Fal-037456	Ficedula albicollis	63.35	5.00e-169	585.00
IUUC-Fox-038025	Fusarium oxysporum	42.83	1.00e-98	351.00
IUUC-Fso-038344	Fusarium solani	43.46	6.00e-95	339.00
IUUC-Gmo-039643	Gadus morhua	61.09	7.00e-169	585.00
IUUC-Ggr-039816	Gaeumannomyces graminis	43.16	3.00e-100	357.00
IUUC-Gga-040143	Gallus gallus	64.25	2.00e-172	596.00
IUUC-Gac-041665	Gasterosteus aculeatus	62.27	7.00e-171	591.00
IUUC-Gma-043073	Glycine max	49.00	2.00e-131	460.00
IUUC-Ggo-045058	Gorilla gorilla	62.67	1.00e-172	598.00
IUUC-Hsa-046843	Homo sapiens	62.44	4.00e-172	596.00
IUUC-Hvu-047654	Hordeum vulgare	48.64	5.00e-75	273.00
IUUC-Itr-048822	Ictidomys tridecemlineatus	63.80	6.00e-175	605.00
IUUC-Kpa-049232	Komagataella pastoris	46.37	2.00e-118	417.00
IUUC-Lch-050542	Latimeria chalumnae	61.19	9.00e-177	611.00
IUUC-Lpe-051622	Leersia perrieri	48.55	4.00e-127	446.00
IUUC-Loc-052674	Lepisosteus oculatus	59.96	4.00e-167	579.00
IUUC-Lma-053108	Leptosphaeria maculans	43.46	1.00e-104	372.00
IUUC-Laf-053385	Loxodonta africana	63.57	4.00e-172	596.00
IUUC-Mcc-055151	Macaca mulatta	63.12	7.00e-173	598.00
IUUC-Meu-056230	Macropus eugenii	62.68	5.00e-81	293.00
IUUC-Mor-057013	Magnaporthe oryzae	41.96	4.00e-98	350.00
IUUC-Mpo-057530	Magnaporthe poae	42.69	2.00e-100	358.00
IUUC-Mtr-058187	Medicago truncatula	50.11	2.00e-132	464.00
IUUC-Mla-058964	Melampsora laricipopulina	37.75	2.00e-87	315.00
IUUC-Mga-059712	Meleagris gallopavo	63.72	5.00e-162	562.00
IUUC-Mvi-060370	Microbotryum violaceum	42.71	2.00e-67	248.00
IUUC-Mmr-061340	Microcebus murinus	59.87	8.00e-160	555.00
IUUC-Mdo-062978	Monodelphis domestica	64.48	3.00e-176	609.00
IUUC-Mmu-063439	Mus musculus	64.71	1.00e-175	607.00
IUUC-Mac-065129	Musa acuminata	48.11	2.00e-132	464.00
IUUC-Mpu-066548	Mustela putorius furo	56.19	6.00e-133	465.00
IUUC-Mlu-067660	Myotis lucifugus	63.12	2.00e-173	600.00
IUUC-Nfi-068455	Neosartorya fischeri	42.76	8.00e-107	379.00
IUUC-Ncr-068848	Neurospora crassa	41.83	1.00e-93	335.00
IUUC-Nle-069923	Nomascus leucogenys	62.90	2.00e-172	597.00
IUUC-Opr-070279	Ochotona princeps	52.97	1.00e-53	202.00
IUUC-Ont-072234	Oreochromis niloticus	63.12	7.00e-175	605.00
IUUC-Oan-073713	Ornithorhynchus anatinus	57.07	6.00e-70	255.00
IUUC-Ocu-073782	Oryctolagus cuniculus	62.67	2.00e-172	597.00
IUUC-Oba-075161	Oryza barthii	48.44	8.00e-127	445.00
IUUC-Obr-076868	Oryza brachyantha	48.55	2.00e-127	447.00
IUUC-Ogl-077062	Oryza glaberrima	48.44	8.00e-127	445.00
IUUC-Ogu-078308	Oryza glumaepatula	48.44	1.00e-126	445.00
IUUC-Oin-079378	Oryza indica	48.44	1.00e-126	445.00
IUUC-Olo-080638	Oryza longistaminata	46.22	2.00e-117	414.00
IUUC-Oni-082368	Oryza nivara	48.44	1.00e-126	445.00
IUUC-Opu-083628	Oryza punctata	48.44	1.00e-126	445.00
IUUC-Oru-085226	Oryza rufipogon	48.22	4.00e-126	443.00
IUUC-Osa-085368	Oryza sativa	44.12	3.00e-67	246.00
IUUC-Ola-086836	Oryzias latipes	63.35	3.00e-175	606.00
IUUC-Olu-087755	Ostreococcus lucimarinus	46.26	1.00e-120	425.00
IUUC-Oga-088170	Otolemur garnettii	62.44	4.00e-172	595.00
IUUC-Oar-089388	Ovis aries	63.35	9.00e-174	601.00
IUUC-Ptr-090494	Pan troglodytes	62.44	1.00e-171	594.00
IUUC-Pan-091697	Papio anubis	63.35	3.00e-173	600.00
IUUC-Psi-093916	Pelodiscus sinensis	61.76	9.00e-166	575.00
IUUC-Pno-095004	Phaeosphaeria nodorum	40.80	5.00e-95	340.00
IUUC-Ppa-095514	Physcomitrella patens	52.12	4.00e-141	493.00
IUUC-Pfo-097432	Poecilia formosa	63.17	1.00e-169	587.00
IUUC-Pab-098423	Pongo abelii	62.90	1.00e-172	597.00
IUUC-Pop-099649	Populus trichocarpa	50.11	2.00e-136	477.00
IUUC-Pca-100365	Procavia capensis	59.95	1.00e-156	545.00
IUUC-Ppe-101350	Prunus persica	47.77	2.00e-132	464.00
IUUC-Pva-102845	Pteropus vampyrus	63.72	4.00e-173	600.00
IUUC-Pgr-103469	Puccinia graminis	37.27	2.00e-61	228.00
IUUC-Ptt-103980	Puccinia triticina	37.46	4.00e-61	227.00
IUUC-Pte-104111	Pyrenophora teres	43.49	8.00e-100	355.00
IUUC-Pyt-104610	Pyrenophora triticirepentis	43.24	2.00e-100	357.00
IUUC-Rno-105082	Rattus norvegicus	64.25	2.00e-175	606.00
IUUC-Sce-106340	Saccharomyces cerevisiae	44.85	5.00e-113	399.00
IUUC-Sha-106584	Sarcophilus harrisii	63.12	2.00e-175	606.00
IUUC-Sja-107703	Schizosaccharomyces japonicus	43.97	1.00e-99	355.00
IUUC-Spo-108046	Schizosaccharomyces pombe	45.82	3.00e-103	367.00
IUUC-Ssl-108574	Sclerotinia sclerotiorum	42.44	6.00e-104	369.00
IUUC-Smo-109548	Selaginella moellendorffii	49.00	3.00e-134	470.00
IUUC-Sit-110242	Setaria italica	47.33	1.00e-123	435.00
IUUC-Sly-111762	Solanum lycopersicum	48.55	4.00e-129	452.00
IUUC-Stu-112156	Solanum tuberosum	49.00	1.00e-130	457.00
IUUC-Sbi-114739	Sorghum bicolor	48.44	3.00e-127	446.00
IUUC-Sre-114951	Sporisorium reilianum	40.74	8.00e-105	372.00
IUUC-Ssc-115510	Sus scrofa	62.90	5.00e-172	595.00
IUUC-Tgu-117234	Taeniopygia guttata	63.31	5.00e-159	552.00
IUUC-Tru-117986	Takifugu rubripes	62.02	2.00e-170	590.00
IUUC-Tsy-119252	Tarsius syrichta	61.07	3.00e-158	550.00
IUUC-Tni-119785	Tetraodon nigroviridis	62.38	8.00e-163	565.00
IUUC-Tca-121222	Theobroma cacao	50.23	2.00e-129	454.00
IUUC-Tre-122243	Trichoderma reesei	40.81	1.00e-94	338.00
IUUC-Tvi-122293	Trichoderma virens	40.81	3.00e-93	333.00
IUUC-Tae-125191	Triticum aestivum	47.33	5.00e-121	426.00
IUUC-Tur-126098	Triticum urartu	45.67	2.00e-113	400.00
IUUC-Tme-127200	Tuber melanosporum	46.64	2.00e-119	421.00
IUUC-Tbe-127568	Tupaia belangeri	58.82	3.00e-79	287.00
IUUC-Ttr-129185	Tursiops truncatus	53.62	1.00e-141	494.00
IUUC-Uma-129353	Ustilago maydis	40.74	7.00e-105	372.00
IUUC-Vda-129768	Verticillium dahliae	41.43	3.00e-95	340.00
IUUC-Vpa-130572	Vicugna pacos	63.12	2.00e-172	597.00
IUUC-Vvi-131555	Vitis vinifera	48.44	3.00e-129	453.00
IUUC-Xtr-132263	Xenopus tropicalis	64.46	1.00e-143	500.00
IUUC-Xma-133925	Xiphophorus maculatus	62.94	3.00e-168	583.00
IUUC-Yli-134384	Yarrowia lipolytica	44.04	2.00e-106	378.00
IUUC-Zma-135616	Zea mays	47.88	4.00e-126	443.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence