iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099492

Ensembl Protein ID

POPTR_0001s41390.1

UniProt Accession

U5GTI1; U5GTI1_POPTR

Genbank Protein ID

ERP66865.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000337

Gene Name

POPTR_0001s41390g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0001s41390	POPTR_0001s41390.1	POPTR_0001s41390.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.40e-21	76.8	615	646

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf...sdtllvsGsdDgtikvWDl 30
           H+d vtc++f   +d++++sGs D ++++W++
   Q: 615  HSDYVTCIQFnpvDDRYFISGSLDAKVRIWSI 646
           9***********766***************96 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSRNDTITDK NDNSNGEEQL VEEKEEDEHF YESLDRIASS SCSCSTSNSD SDPDPTRSNS 60
PRLLASNYHV WISQPESISE RRQRLLLQMG LSSDPSLSRS KPETAHNGDF YFNRSLSSDR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCTTTCCCTT AACGCTATCT CAATTCTCAA CAATGACCCC TCCACAACCC CTCAAAAAAT 60
GAGCAGAAAC GACACCATTA CTGACAAAAA CGACAACAGT AACGGTGAAG AACAACTAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

KEGG

pop:POPTR_0001s41390g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000228	Aegilops tauschii	55.73	1.00e-129	456.00
IUUC-Aly-005741	Arabidopsis lyrata	75.61	0.00e+00	659.00
IUUC-Ath-007063	Arabidopsis thaliana	75.39	0.00e+00	657.00
IUUC-Bdi-014809	Brachypodium distachyon	59.65	4.00e-137	481.00
IUUC-Bol-015849	Brassica oleracea	73.45	0.00e+00	631.00
IUUC-Bra-017269	Brassica rapa	74.12	0.00e+00	629.00
IUUC-Cme-027130	Cyanidioschyzon merolae	32.83	1.00e-43	171.00
IUUC-Eeu-035325	Erinaceus europaeus	48.10	2.00e-40	160.00
IUUC-Gma-043178	Glycine max	75.71	5.00e-180	624.00
IUUC-Hvu-047755	Hordeum vulgare	58.06	3.00e-133	468.00
IUUC-Lpe-050824	Leersia perrieri	63.95	3.00e-155	541.00
IUUC-Mtr-058330	Medicago truncatula	72.45	4.00e-178	617.00
IUUC-Mac-064884	Musa acuminata	65.12	2.00e-162	566.00
IUUC-Oan-072824	Ornithorhynchus anatinus	30.72	3.00e-46	179.00
IUUC-Oba-075809	Oryza barthii	59.65	6.00e-138	484.00
IUUC-Obr-076635	Oryza brachyantha	64.35	5.00e-148	517.00
IUUC-Ogl-077783	Oryza glaberrima	64.78	5.00e-161	560.00
IUUC-Ogu-078005	Oryza glumaepatula	64.92	3.00e-162	565.00
IUUC-Oin-079138	Oryza indica	60.78	6.00e-150	524.00
IUUC-Olo-080307	Oryza longistaminata	54.23	2.00e-115	409.00
IUUC-Ome-081629	Oryza meridionalis	59.44	3.00e-137	482.00
IUUC-Oni-082452	Oryza nivara	64.71	1.00e-161	562.00
IUUC-Opu-084083	Oryza punctata	58.57	3.00e-146	511.00
IUUC-Oru-085211	Oryza rufipogon	64.92	3.00e-162	565.00
IUUC-Osa-086029	Oryza sativa	56.13	4.00e-124	438.00
IUUC-Ola-086963	Oryzias latipes	39.51	3.00e-50	192.00
IUUC-Pma-094528	Petromyzon marinus	29.23	1.00e-45	176.00
IUUC-Ppe-101184	Prunus persica	83.25	0.00e+00	633.00
IUUC-Sit-110585	Setaria italica	59.67	1.00e-140	493.00
IUUC-Sly-111804	Solanum lycopersicum	60.49	0.00e+00	635.00
IUUC-Stu-111949	Solanum tuberosum	73.26	0.00e+00	646.00
IUUC-Sar-112958	Sorex araneus	60.00	2.00e-18	87.40
IUUC-Sbi-114330	Sorghum bicolor	62.34	3.00e-136	478.00
IUUC-Tsy-118845	Tarsius syrichta	40.00	9.00e-29	122.00
IUUC-Tca-121052	Theobroma cacao	84.44	0.00e+00	666.00
IUUC-Tae-125210	Triticum aestivum	62.99	2.00e-145	509.00
IUUC-Tur-126660	Triticum urartu	58.28	1.00e-142	499.00
IUUC-Vvi-130908	Vitis vinifera	80.53	0.00e+00	649.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence