iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111365

Ensembl Protein ID

Solyc02g030080.2.1

UniProt Accession

K4B559; K4B559_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc02g030080.2	Solyc02g030080.2.1	Solyc02g030080.2.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-07	31.9	12	37

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 10   af.sd.tllvsGsdDgtikvWDlrtg 33
           +f ++ ++++ +s+Dg ik+WD+ +g
   Q: 12   CFsPSlDFFAISSGDGRIKIWDTVKG 37
           57778899999***********8766 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MGTANIRDIL TCFSPSLDFF AISSGDGRIK IWDTVKGQVQ TEFADIVSME KESSFNKPGG 60
HLSMDYTCMK WLSCDRKKKR KIGTSLLVLG TGSGDFLALD VSAGHLKWRF SDCHPGGVNA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AAGGTTTAGC CTTCTCTTTA AGCCGCCCTG CTCCTTTGCC ATTATTTCCC TTTTTTCAGC 60
GCCACCGTCT GTTCAGCAGC TCTACCTTCT CCCTCGCCGG AAGCTCCAGT TTTCCACCGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011047--Quinoprotein_ADH-like_supfam
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005730--C:nucleolus
GO:0006364--P:rRNA processing

KEGG

sly:101243653

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001865	Ailuropoda melanoleuca	24.22	1.00e-29	124.00
IUUC-Atr-002533	Amborella trichopoda	46.23	2.00e-137	482.00
IUUC-Apl-003242	Anas platyrhynchos	22.68	3.00e-16	79.30
IUUC-Aca-004607	Anolis carolinensis	24.92	2.00e-18	87.00
IUUC-Aly-006074	Arabidopsis lyrata	56.60	2.00e-156	545.00
IUUC-Ath-007222	Arabidopsis thaliana	57.42	5.00e-157	546.00
IUUC-Ame-011014	Astyanax mexicanus	24.06	7.00e-21	94.70
IUUC-Bta-012605	Bos taurus	24.55	2.00e-31	130.00
IUUC-Bdi-014072	Brachypodium distachyon	46.98	1.00e-140	493.00
IUUC-Bol-016255	Brassica oleracea	55.88	0.00e+00	631.00
IUUC-Bra-017484	Brassica rapa	56.08	5.00e-176	610.00
IUUC-Cja-019620	Callithrix jacchus	24.05	3.00e-30	125.00
IUUC-Cfa-020520	Canis familiaris	24.38	1.00e-29	124.00
IUUC-Cpo-022456	Cavia porcellus	23.06	9.00e-23	101.00
IUUC-Cho-024726	Choloepus hoffmanni	23.24	2.00e-24	106.00
IUUC-Cin-025761	Ciona intestinalis	23.40	1.00e-13	71.20
IUUC-Dre-028051	Danio rerio	28.18	4.00e-24	105.00
IUUC-Dno-030031	Dasypus novemcinctus	23.13	3.00e-28	119.00
IUUC-Dme-031653	Drosophila melanogaster	22.89	4.00e-17	82.40
IUUC-Eca-033243	Equus caballus	23.76	1.00e-22	100.00
IUUC-Eeu-034970	Erinaceus europaeus	23.38	4.00e-13	69.30
IUUC-Fca-036009	Felis catus	24.22	1.00e-30	127.00
IUUC-Fal-037264	Ficedula albicollis	21.80	2.00e-15	77.00
IUUC-Gmo-039124	Gadus morhua	26.52	3.00e-27	115.00
IUUC-Gga-040862	Gallus gallus	26.49	3.00e-23	102.00
IUUC-Gac-041468	Gasterosteus aculeatus	24.50	1.00e-29	124.00
IUUC-Gma-042795	Glycine max	54.82	9.00e-167	579.00
IUUC-Ggo-044432	Gorilla gorilla	24.17	5.00e-30	125.00
IUUC-Hsa-047036	Homo sapiens	23.71	1.00e-29	124.00
IUUC-Hvu-047736	Hordeum vulgare	28.02	1.00e-25	109.00
IUUC-Itr-048644	Ictidomys tridecemlineatus	22.86	1.00e-27	117.00
IUUC-Lch-049553	Latimeria chalumnae	24.86	6.00e-22	98.60
IUUC-Laf-053462	Loxodonta africana	24.06	4.00e-28	119.00
IUUC-Mcc-055239	Macaca mulatta	23.87	5.00e-30	125.00
IUUC-Mtr-057977	Medicago truncatula	54.00	1.00e-165	575.00
IUUC-Mmr-061472	Microcebus murinus	23.92	9.00e-30	124.00
IUUC-Mdo-061972	Monodelphis domestica	22.91	1.00e-27	117.00
IUUC-Mmu-063354	Mus musculus	22.98	5.00e-25	108.00
IUUC-Mac-065064	Musa acuminata	57.28	7.00e-136	476.00
IUUC-Mpu-066877	Mustela putorius furo	24.22	4.00e-30	125.00
IUUC-Mlu-067476	Myotis lucifugus	24.51	1.00e-26	114.00
IUUC-Nle-069119	Nomascus leucogenys	23.71	2.00e-29	123.00
IUUC-Ont-072093	Oreochromis niloticus	25.83	5.00e-32	132.00
IUUC-Oan-072944	Ornithorhynchus anatinus	21.89	4.00e-18	85.90
IUUC-Ocu-074472	Oryctolagus cuniculus	23.16	4.00e-26	112.00
IUUC-Oba-075009	Oryza barthii	46.45	6.00e-132	463.00
IUUC-Ogl-077189	Oryza glaberrima	44.15	3.00e-129	455.00
IUUC-Oin-079064	Oryza indica	46.45	6.00e-132	463.00
IUUC-Opu-083604	Oryza punctata	47.26	5.00e-132	464.00
IUUC-Oru-084620	Oryza rufipogon	46.45	3.00e-131	461.00
IUUC-Osa-085345	Oryza sativa	46.61	4.00e-132	464.00
IUUC-Ola-086626	Oryzias latipes	25.90	4.00e-34	139.00
IUUC-Oga-087911	Otolemur garnettii	23.52	1.00e-27	117.00
IUUC-Ptr-091603	Pan troglodytes	23.71	1.00e-29	123.00
IUUC-Pan-092569	Papio anubis	23.87	5.00e-30	125.00
IUUC-Pma-094287	Petromyzon marinus	25.76	2.00e-25	110.00
IUUC-Ppa-095327	Physcomitrella patens	36.88	2.00e-65	243.00
IUUC-Pfo-097292	Poecilia formosa	25.75	2.00e-26	113.00
IUUC-Pab-097878	Pongo abelii	23.71	2.00e-29	123.00
IUUC-Pop-099418	Populus trichocarpa	58.19	1.00e-175	608.00
IUUC-Pca-100941	Procavia capensis	28.92	2.00e-16	80.50
IUUC-Ppe-101779	Prunus persica	58.83	0.00e+00	667.00
IUUC-Pva-102493	Pteropus vampyrus	30.10	1.00e-16	80.90
IUUC-Rno-105084	Rattus norvegicus	28.95	4.00e-22	99.40
IUUC-Sha-107486	Sarcophilus harrisii	25.41	1.00e-23	104.00
IUUC-Smo-108825	Selaginella moellendorffii	31.67	5.00e-65	241.00
IUUC-Sit-110825	Setaria italica	47.55	3.00e-142	498.00
IUUC-Stu-112812	Solanum tuberosum	97.84	0.00e+00	1143.00
IUUC-Sar-113326	Sorex araneus	28.81	8.00e-20	91.30
IUUC-Sbi-114426	Sorghum bicolor	47.01	3.00e-147	514.00
IUUC-Tgu-116726	Taeniopygia guttata	22.80	2.00e-24	106.00
IUUC-Tru-117848	Takifugu rubripes	27.61	8.00e-28	118.00
IUUC-Tni-120591	Tetraodon nigroviridis	26.65	8.00e-27	114.00
IUUC-Tca-121576	Theobroma cacao	56.17	9.00e-178	615.00
IUUC-Tae-125648	Triticum aestivum	48.12	1.00e-144	505.00
IUUC-Tbe-127832	Tupaia belangeri	23.93	5.00e-21	95.10
IUUC-Ttr-128812	Tursiops truncatus	23.62	2.00e-23	103.00
IUUC-Xma-133557	Xiphophorus maculatus	26.58	8.00e-28	117.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence