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Basic Information Integrated Annotations
Tag Content
UUCD2 ID IUUC-Spo-108206
UUCD1 version UUC-ScP-00100
Ensembl Protein ID SPBC18H10.06c.1:pep
UniProt Accession O60137; SWD2_SCHPO
Genbank Protein ID CAA18403.1
Protein Name Set1 complex component swd2; COMPASS component swd2; Complex proteins associated with set1 protein swd2
Genbank Nucleotide ID CU329671
Gene Name swd2; swd2.1; SPBC18H10.06c
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
SPBC18H10.06c SPBC18H10.06c.1 SPBC18H10.06c.1:pep
Annotation
mRNA Expression
GEO
Protein-protein Interaction
iRefIndexMentha
Protein Expression/Proteomics
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.20e-12 43.7 110 146
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD
   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvl 35
           gH+  vt+++    d +++s+s D+ti++WDlr+ ++
   Q: 110  GHKQTVTSIDVspADETFLSASLDNTIRLWDLRSPNC 146
           8**********9755999**************99876 PP
   
Organism Schizosaccharomyces pombe
Functional Description
(View)

Functional Description


     The Set1 complex specifically methylates 'Lys-4' of histone H3.
 The Set1 complex specifically methylates 'Lys-4' of histone H3.
Protein Sequence
(Fasta)
MTTVSITFDL LSSMQPRKWL KNQNFVGEIT SLSFDDSGEL CLASCTDDTL QLYNCISGKF 60
VKSLASKKYG AHLGRFTHHS NSLIHASTKE DNTVRYLDVV TNRYLRYFPG HKQTVTSIDV 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Spo-108206|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATTCTGAATA TTAATAGGAG ATACGCACTA AATACATACT TAAAACTTAT TTACCCATAT 60
ATTTTTCTCA GGAAACCCAC CTTTTAGCAT ACCGTTATTT AGTAATGACA ACAGTTTCAA 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Spo-108206|E3,WD_repeat|Schizosaccharomyces pombe
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat
Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom
PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
Pfam

PF00400--WD40
SMART

SM00320--WD40
Gene Ontology

GO:0005829--C:cytosol
GO:0048188--C:Set1C/COMPASS complex
GO:0003682--F:chromatin binding
GO:0070869--P:heterochromatin assembly involved in chromatin silencing
GO:0051568--P:histone H3-K4 methylation
GO:0080182--P:histone H3-K4 trimethylation
KEGG spo:SPBC18H10.06c
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aml-001221 Ailuropoda melanoleuca 34.65 1.00e-48 184.00
IUUC-Atr-002592 Amborella trichopoda 39.45 7.00e-38 148.00
IUUC-Apl-003817 Anas platyrhynchos 39.29 6.00e-48 183.00
IUUC-Aca-005383 Anolis carolinensis 34.65 2.00e-48 184.00
IUUC-Ago-007804 Ashbya gossypii 33.06 3.00e-50 189.00
IUUC-Afl-008539 Aspergillus flavus 33.24 8.00e-55 205.00
IUUC-Afu-009105 Aspergillus fumigatus 33.24 5.00e-53 199.00
IUUC-Ang-009858 Aspergillus niger 32.14 2.00e-52 197.00
IUUC-Aor-009955 Aspergillus oryzae 33.24 8.00e-55 205.00
IUUC-Ate-010364 Aspergillus terreus 33.79 7.00e-55 205.00
IUUC-Ame-010661 Astyanax mexicanus 38.62 2.00e-46 177.00
IUUC-Bgr-012008 Blumeria graminis 32.58 8.00e-47 179.00
IUUC-Bta-013022 Bos taurus 38.89 1.00e-47 182.00
IUUC-Bdi-015066 Brachypodium distachyon 32.28 2.00e-39 153.00
IUUC-Bol-016019 Brassica oleracea 35.57 1.00e-38 151.00
IUUC-Cel-018276 Caenorhabditis elegans 39.06 2.00e-43 167.00
IUUC-Cja-019309 Callithrix jacchus 34.65 1.00e-48 184.00
IUUC-Cfa-020345 Canis familiaris 34.65 1.00e-48 184.00
IUUC-Cpo-022227 Cavia porcellus 32.02 7.00e-38 149.00
IUUC-Csa-023267 Chlorocebus sabaeus 33.74 2.00e-49 187.00
IUUC-Cho-024409 Choloepus hoffmanni 33.33 2.00e-36 144.00
IUUC-Cgl-026516 Colletotrichum gloeosporioides 32.97 5.00e-50 189.00
IUUC-Cne-026890 Cryptococcus neoformans 33.16 5.00e-40 156.00
IUUC-Cme-027288 Cyanidioschyzon merolae 26.34 2.00e-36 144.00
IUUC-Dre-028001 Danio rerio 34.04 1.00e-48 184.00
IUUC-Dno-029704 Dasypus novemcinctus 34.94 9.00e-51 191.00
IUUC-Dor-031078 Dipodomys ordii 31.40 9.00e-27 110.00
IUUC-Dse-031152 Dothistroma septosporum 40.28 1.00e-54 204.00
IUUC-Dme-032085 Drosophila melanogaster 34.65 1.00e-50 191.00
IUUC-Ete-033158 Echinops telfairi 34.76 2.00e-48 183.00
IUUC-Eca-033879 Equus caballus 40.57 2.00e-43 168.00
IUUC-Eeu-035229 Erinaceus europaeus 30.12 3.00e-28 116.00
IUUC-Fca-035896 Felis catus 34.65 1.00e-48 184.00
IUUC-Fal-036843 Ficedula albicollis 40.24 7.00e-48 182.00
IUUC-Gmo-038506 Gadus morhua 40.89 1.00e-46 179.00
IUUC-Ggr-040090 Gaeumannomyces graminis 31.17 4.00e-53 199.00
IUUC-Gga-040192 Gallus gallus 34.65 4.00e-49 186.00
IUUC-Gac-041551 Gasterosteus aculeatus 32.73 4.00e-47 179.00
IUUC-Gma-044074 Glycine max 31.86 1.00e-40 157.00
IUUC-Ggo-045204 Gorilla gorilla 39.84 8.00e-48 182.00
IUUC-Hsa-045866 Homo sapiens 34.65 1.00e-48 184.00
IUUC-Hvu-047731 Hordeum vulgare 39.17 2.00e-40 157.00
IUUC-Itr-048338 Ictidomys tridecemlineatus 34.65 1.00e-48 184.00
IUUC-Kpa-049249 Komagataella pastoris 39.16 2.00e-62 230.00
IUUC-Lch-050431 Latimeria chalumnae 39.84 1.00e-47 182.00
IUUC-Lpe-050830 Leersia perrieri 37.79 1.00e-39 154.00
IUUC-Lma-053026 Leptosphaeria maculans 35.68 2.00e-59 220.00
IUUC-Laf-054265 Loxodonta africana 41.40 3.00e-45 173.00
IUUC-Mcc-055583 Macaca mulatta 34.65 1.00e-48 184.00
IUUC-Mor-057267 Magnaporthe oryzae 32.96 2.00e-48 184.00
IUUC-Mtr-058200 Medicago truncatula 36.40 1.00e-40 157.00
IUUC-Mla-058815 Melampsora laricipopulina 36.93 1.00e-62 231.00
IUUC-Mga-059407 Meleagris gallopavo 34.58 7.00e-45 171.00
IUUC-Mmr-061470 Microcebus murinus 34.65 1.00e-48 184.00
IUUC-Mdo-062860 Monodelphis domestica 34.95 3.00e-49 186.00
IUUC-Mmu-063105 Mus musculus 34.65 1.00e-48 184.00
IUUC-Mac-065314 Musa acuminata 37.16 5.00e-40 156.00
IUUC-Mpu-066472 Mustela putorius furo 34.58 2.00e-44 170.00
IUUC-Mlu-067073 Myotis lucifugus 34.65 1.00e-48 184.00
IUUC-Nfi-068284 Neosartorya fischeri 32.97 2.00e-53 200.00
IUUC-Ncr-068702 Neurospora crassa 32.85 2.00e-47 180.00
IUUC-Nle-069451 Nomascus leucogenys 34.65 1.00e-48 184.00
IUUC-Opr-071112 Ochotona princeps 34.58 2.00e-44 170.00
IUUC-Ont-071988 Oreochromis niloticus 41.46 3.00e-48 184.00
IUUC-Oan-072947 Ornithorhynchus anatinus 34.58 8.00e-45 171.00
IUUC-Ocu-074969 Oryctolagus cuniculus 34.65 1.00e-48 184.00
IUUC-Oba-075229 Oryza barthii 32.24 6.00e-30 123.00
IUUC-Obr-076456 Oryza brachyantha 38.25 9.00e-40 155.00
IUUC-Ogl-076973 Oryza glaberrima 33.82 3.00e-40 156.00
IUUC-Ogu-078068 Oryza glumaepatula 31.84 6.00e-30 122.00
IUUC-Oin-079656 Oryza indica 38.71 6.00e-40 155.00
IUUC-Olo-080893 Oryza longistaminata 33.49 6.00e-29 119.00
IUUC-Ome-081559 Oryza meridionalis 39.29 4.00e-24 102.00
IUUC-Oni-082990 Oryza nivara 31.84 1.00e-29 122.00
IUUC-Opu-083374 Oryza punctata 31.84 4.00e-30 123.00
IUUC-Oru-084354 Oryza rufipogon 31.84 1.00e-29 122.00
IUUC-Osa-086296 Oryza sativa 38.71 6.00e-40 155.00
IUUC-Ola-087095 Oryzias latipes 35.56 9.00e-49 184.00
IUUC-Olu-087603 Ostreococcus lucimarinus 28.76 8.00e-28 115.00
IUUC-Oga-088766 Otolemur garnettii 34.65 1.00e-48 184.00
IUUC-Oar-089565 Ovis aries 34.35 1.00e-47 181.00
IUUC-Ptr-091219 Pan troglodytes 32.83 6.00e-48 182.00
IUUC-Pan-091733 Papio anubis 34.65 1.00e-48 184.00
IUUC-Psi-092972 Pelodiscus sinensis 39.13 4.00e-47 180.00
IUUC-Pma-094332 Petromyzon marinus 35.24 4.00e-51 192.00
IUUC-Pno-094960 Phaeosphaeria nodorum 35.92 3.00e-57 213.00
IUUC-Ppa-095292 Physcomitrella patens 38.65 5.00e-46 176.00
IUUC-Pfo-096775 Poecilia formosa 41.46 5.00e-48 183.00
IUUC-Pab-097721 Pongo abelii 34.65 1.00e-48 184.00
IUUC-Pop-099608 Populus trichocarpa 39.63 2.00e-40 157.00
IUUC-Pca-100635 Procavia capensis 34.58 2.00e-41 160.00
IUUC-Ppe-101452 Prunus persica 38.99 5.00e-41 159.00
IUUC-Pva-102798 Pteropus vampyrus 34.65 1.00e-48 184.00
IUUC-Pgr-103395 Puccinia graminis 37.80 3.00e-62 230.00
IUUC-Ptt-103747 Puccinia triticina 38.12 1.00e-60 225.00
IUUC-Pte-104129 Pyrenophora teres 39.39 2.00e-57 215.00
IUUC-Pyt-104773 Pyrenophora triticirepentis 34.41 2.00e-57 214.00
IUUC-Rno-106127 Rattus norvegicus 33.94 1.00e-43 168.00
IUUC-Sce-106257 Saccharomyces cerevisiae 33.51 7.00e-50 188.00
IUUC-Sha-106491 Sarcophilus harrisii 32.73 2.00e-47 180.00
IUUC-Sja-107724 Schizosaccharomyces japonicus 46.65 2.00e-83 300.00
IUUC-Smo-108979 Selaginella moellendorffii 39.06 6.00e-45 172.00
IUUC-Sit-109858 Setaria italica 38.71 5.00e-40 155.00
IUUC-Sly-111267 Solanum lycopersicum 32.58 5.00e-42 162.00
IUUC-Sar-113079 Sorex araneus 34.58 2.00e-44 170.00
IUUC-Sbi-114232 Sorghum bicolor 38.53 3.00e-40 156.00
IUUC-Sre-115157 Sporisorium reilianum 31.55 3.00e-50 190.00
IUUC-Ssc-116386 Sus scrofa 34.65 1.00e-48 184.00
IUUC-Tgu-116465 Taeniopygia guttata 39.73 1.00e-42 165.00
IUUC-Tru-117604 Takifugu rubripes 41.46 1.00e-47 182.00
IUUC-Tsy-119314 Tarsius syrichta 31.98 2.00e-23 100.00
IUUC-Tni-120237 Tetraodon nigroviridis 41.46 4.00e-46 177.00
IUUC-Tca-121853 Theobroma cacao 39.45 8.00e-41 158.00
IUUC-Tae-124944 Triticum aestivum 39.17 3.00e-40 156.00
IUUC-Tur-126512 Triticum urartu 32.64 8.00e-31 125.00
IUUC-Tme-126883 Tuber melanosporum 37.22 8.00e-65 238.00
IUUC-Ttr-128307 Tursiops truncatus 34.58 2.00e-44 170.00
IUUC-Uma-129579 Ustilago maydis 31.79 1.00e-54 204.00
IUUC-Vpa-130091 Vicugna pacos 34.58 2.00e-44 170.00
IUUC-Vvi-131587 Vitis vinifera 39.45 4.00e-41 159.00
IUUC-Xtr-132660 Xenopus tropicalis 38.62 2.00e-47 181.00
IUUC-Xma-133496 Xiphophorus maculatus 35.56 2.00e-49 187.00
IUUC-Yli-134509 Yarrowia lipolytica 36.67 3.00e-58 216.00
IUUC-Zma-134685 Zea mays 37.79 2.00e-39 154.00
Created Date 25-Jun-2017

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