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Tag Content
iUUCD ID IUUC-Fal-036600
Ensembl Protein ID ENSFALP00000005698.1
UniProt Accession U3JSE4; U3JSE4_FICAL
Genbank Protein ID ENSFALP00000005698
Protein Name Presenilin
Genbank Nucleotide ID AGTO01021191
Gene Name PSEN1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSFALG00000005466.1 ENSFALT00000005725.1 ENSFALP00000005698.1
Status Unreviewed
Classification
Family E-Value Score Start End
UBD/Alpha-Helix/CUE 5.70e-08 32.3 273 308
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   UBD/Alpha-Helix/CUE

   S: 2    letaleqLkeiFPnldysviqvvLeantgsleaavn 37
    +eta+e+++++FP+l+ys+++ +L++++ +++a+
   Q: 273 VETAQERNETLFPALIYSSTMIWLVNMAEEDPEAQR 308
    89*************************998888875 PP
   

Organism Ficedula albicollis
Functional Description
(View)

Functional Description



     Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.
Protein Sequence
(Fasta)
MTELSAHLPQ FQHGQLTENF PDTHLSNTND NSERRRHDNN ERRRNDHAES ETNGQPQNNI 60
QQVVEQDEEE DEELTLKYGA KHVIMLFVPV TLCMVVVVAT IKSVSFYTRK DGQLIYTPFT 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Fal-036600|UBD,CUE|Ficedula albicollis
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGACAGAGC TGTCTGCACA TTTACCCCAG TTTCAGCATG GGCAGCTGAC AGAAAACTTC 60
CCTGATACTC ACCTCAGCAA CACCGTATGT AACAAACAAT TTTAGTACCT GGTAGTAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Fal-036600|UBD,CUE|Ficedula albicollis
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR002031--Pept_A22A_PS1
IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN
PR01073--PRESENILIN1

SMART

SM00730--PSN

Gene Ontology

GO:0016235--C:aggresome
GO:0030424--C:axon
GO:0005938--C:cell cortex
GO:0030054--C:cell junction
GO:0005813--C:centrosome
GO:0035253--C:ciliary rootlet
GO:0031410--C:cytoplasmic vesicle
GO:0043198--C:dendritic shaft
GO:0005789--C:endoplasmic reticulum membrane
GO:0070765--C:gamma-secretase complex
GO:0000139--C:Golgi membrane
GO:0030426--C:growth cone
GO:0005887--C:integral component of plasma membrane
GO:0000776--C:kinetochore
GO:0045121--C:membrane raft
GO:0005739--C:mitochondrion
GO:0043025--C:neuronal cell body
GO:0005640--C:nuclear outer membrane
GO:0098793--C:presynapse
GO:0005791--C:rough endoplasmic reticulum
GO:0005790--C:smooth endoplasmic reticulum
GO:0042500--F:aspartic endopeptidase activity, intramembrane cleaving
GO:0005262--F:calcium channel activity
GO:0000186--P:activation of MAPKK activity
GO:0000045--P:autophagosome assembly
GO:0034205--P:beta-amyloid formation
GO:0001568--P:blood vessel development
GO:0048854--P:brain morphogenesis
GO:0021870--P:Cajal-Retzius cell differentiation
GO:0001708--P:cell fate specification
GO:0006974--P:cellular response to DNA damage stimulus
GO:0021795--P:cerebral cortex cell migration
GO:0015871--P:choline transport
GO:0021904--P:dorsal/ventral neural tube patterning
GO:0030326--P:embryonic limb morphogenesis
GO:0050673--P:epithelial cell proliferation
GO:0001947--P:heart looping
GO:0002244--P:hematopoietic progenitor cell differentiation
GO:0035556--P:intracellular signal transduction
GO:0015813--P:L-glutamate transport
GO:0006509--P:membrane protein ectodomain proteolysis
GO:0007613--P:memory
GO:0006839--P:mitochondrial transport
GO:0043011--P:myeloid dendritic cell differentiation
GO:2001234--P:negative regulation of apoptotic signaling pathway
GO:0050771--P:negative regulation of axonogenesis
GO:0007175--P:negative regulation of epidermal growth factor-activated receptor activity
GO:2000059--P:negative regulation of protein ubiquitination involved in ubiquitin-dependent protein catabolic process
GO:0000122--P:negative regulation of transcription from RNA polymerase II promoter
GO:0051444--P:negative regulation of ubiquitin-protein transferase activity
GO:0051402--P:neuron apoptotic process
GO:0048666--P:neuron development
GO:0001764--P:neuron migration
GO:0007220--P:Notch receptor processing
GO:0007219--P:Notch signaling pathway
GO:0043065--P:positive regulation of apoptotic process
GO:0050820--P:positive regulation of coagulation
GO:0060999--P:positive regulation of dendritic spine development
GO:0043406--P:positive regulation of MAP kinase activity
GO:0032436--P:positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0001921--P:positive regulation of receptor recycling
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0009791--P:post-embryonic development
GO:0006486--P:protein glycosylation
GO:0016485--P:protein processing
GO:0015031--P:protein transport
GO:0060828--P:regulation of canonical Wnt signaling pathway
GO:0043393--P:regulation of protein binding
GO:0060075--P:regulation of resting membrane potential
GO:0048167--P:regulation of synaptic plasticity
GO:0051966--P:regulation of synaptic transmission, glutamatergic
GO:0006979--P:response to oxidative stress
GO:0016337--P:single organismal cell-cell adhesion
GO:0048705--P:skeletal system morphogenesis
GO:0043589--P:skin morphogenesis
GO:0051563--P:smooth endoplasmic reticulum calcium ion homeostasis
GO:0001756--P:somitogenesis
GO:0016080--P:synaptic vesicle targeting
GO:0002286--P:T cell activation involved in immune response
GO:0050852--P:T cell receptor signaling pathway
GO:0048538--P:thymus development

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000686 Aegilops tauschii 33.77 9.00e-26 112.00
IUUC-Aml-001648 Ailuropoda melanoleuca 86.58 4.00e-150 523.00
IUUC-Atr-003039 Amborella trichopoda 32.21 5.00e-39 154.00
IUUC-Apl-003727 Anas platyrhynchos 95.10 0.00e+00 733.00
IUUC-Aca-004582 Anolis carolinensis 87.61 0.00e+00 699.00
IUUC-Aly-005455 Arabidopsis lyrata 56.67 1.00e-17 83.60
IUUC-Ame-011500 Astyanax mexicanus 75.72 1.00e-151 529.00
IUUC-Bta-013026 Bos taurus 80.67 2.00e-178 618.00
IUUC-Bdi-014196 Brachypodium distachyon 31.96 6.00e-29 122.00
IUUC-Bol-015841 Brassica oleracea 34.20 1.00e-30 127.00
IUUC-Cel-018553 Caenorhabditis elegans 53.38 1.00e-94 339.00
IUUC-Cja-019994 Callithrix jacchus 87.68 2.00e-175 608.00
IUUC-Cfa-020074 Canis familiaris 83.80 0.00e+00 634.00
IUUC-Cpo-022237 Cavia porcellus 85.39 1.00e-180 625.00
IUUC-Cre-022747 Chlamydomonas reinhardtii 33.64 2.00e-28 120.00
IUUC-Csa-023537 Chlorocebus sabaeus 83.47 0.00e+00 646.00
IUUC-Cho-024735 Choloepus hoffmanni 74.15 8.00e-166 576.00
IUUC-Cin-025780 Ciona intestinalis 62.50 5.00e-125 440.00
IUUC-Csv-025967 Ciona savignyi 63.70 9.00e-122 429.00
IUUC-Dre-028689 Danio rerio 73.72 1.00e-146 512.00
IUUC-Dno-029758 Dasypus novemcinctus 83.90 0.00e+00 631.00
IUUC-Dor-030609 Dipodomys ordii 63.62 5.00e-140 490.00
IUUC-Dme-031929 Drosophila melanogaster 56.04 3.00e-113 401.00
IUUC-Ete-032487 Echinops telfairi 74.76 2.00e-71 262.00
IUUC-Eeu-035134 Erinaceus europaeus 85.67 3.00e-131 460.00
IUUC-Fca-036243 Felis catus 83.40 0.00e+00 627.00
IUUC-Gga-040993 Gallus gallus 96.15 0.00e+00 746.00
IUUC-Gac-042342 Gasterosteus aculeatus 69.65 8.00e-134 469.00
IUUC-Ggo-044859 Gorilla gorilla 83.09 4.00e-142 497.00
IUUC-Hsa-046822 Homo sapiens 83.69 0.00e+00 647.00
IUUC-Hvu-047141 Hordeum vulgare 34.87 6.00e-27 114.00
IUUC-Itr-048420 Ictidomys tridecemlineatus 87.27 1.00e-141 494.00
IUUC-Lch-049946 Latimeria chalumnae 73.77 9.00e-156 543.00
IUUC-Lpe-051132 Leersia perrieri 32.43 2.00e-29 122.00
IUUC-Loc-052469 Lepisosteus oculatus 66.48 9.00e-151 526.00
IUUC-Laf-053979 Loxodonta africana 85.04 1.00e-162 565.00
IUUC-Mcc-055682 Macaca mulatta 83.69 0.00e+00 647.00
IUUC-Meu-056004 Macropus eugenii 72.86 3.00e-144 504.00
IUUC-Mtr-058392 Medicago truncatula 33.79 2.00e-29 123.00
IUUC-Mga-059466 Meleagris gallopavo 95.73 0.00e+00 742.00
IUUC-Mdo-062122 Monodelphis domestica 82.07 0.00e+00 638.00
IUUC-Mmu-063176 Mus musculus 81.49 1.00e-177 615.00
IUUC-Mac-064858 Musa acuminata 38.14 2.00e-21 95.90
IUUC-Mpu-065927 Mustela putorius furo 84.19 0.00e+00 634.00
IUUC-Mlu-067079 Myotis lucifugus 82.80 0.00e+00 654.00
IUUC-Nle-070180 Nomascus leucogenys 83.69 0.00e+00 647.00
IUUC-Opr-070847 Ochotona princeps 77.80 2.00e-166 578.00
IUUC-Ont-071846 Oreochromis niloticus 79.00 4.00e-151 527.00
IUUC-Oan-072783 Ornithorhynchus anatinus 84.36 6.00e-137 479.00
IUUC-Ocu-074527 Oryctolagus cuniculus 83.16 0.00e+00 644.00
IUUC-Oba-075256 Oryza barthii 33.94 2.00e-27 116.00
IUUC-Obr-076302 Oryza brachyantha 31.28 1.00e-29 124.00
IUUC-Ogl-077097 Oryza glaberrima 32.12 3.00e-28 119.00
IUUC-Ogu-078570 Oryza glumaepatula 32.12 3.00e-28 119.00
IUUC-Oin-079244 Oryza indica 32.96 3.00e-28 119.00
IUUC-Olo-080484 Oryza longistaminata 37.14 1.00e-23 103.00
IUUC-Ome-081814 Oryza meridionalis 32.68 9.00e-29 120.00
IUUC-Oni-082057 Oryza nivara 32.12 2.00e-28 119.00
IUUC-Opu-084176 Oryza punctata 33.05 8.00e-29 121.00
IUUC-Oru-084618 Oryza rufipogon 32.12 4.00e-28 119.00
IUUC-Osa-085602 Oryza sativa 32.12 4.00e-28 119.00
IUUC-Olu-087811 Ostreococcus lucimarinus 35.85 5.00e-44 171.00
IUUC-Oar-090348 Ovis aries 81.95 0.00e+00 650.00
IUUC-Ptr-091060 Pan troglodytes 83.69 0.00e+00 647.00
IUUC-Pan-091855 Papio anubis 77.33 1.00e-163 568.00
IUUC-Psi-093505 Pelodiscus sinensis 93.16 0.00e+00 728.00
IUUC-Pfo-097396 Poecilia formosa 75.93 3.00e-156 544.00
IUUC-Pab-098591 Pongo abelii 84.19 0.00e+00 652.00
IUUC-Pop-099661 Populus trichocarpa 31.68 8.00e-32 130.00
IUUC-Pca-101029 Procavia capensis 80.72 6.00e-171 593.00
IUUC-Ppe-101495 Prunus persica 30.27 6.00e-32 131.00
IUUC-Pva-102244 Pteropus vampyrus 78.34 3.00e-170 590.00
IUUC-Rno-105861 Rattus norvegicus 81.49 2.00e-175 607.00
IUUC-Sha-107045 Sarcophilus harrisii 83.30 0.00e+00 637.00
IUUC-Ssl-108517 Sclerotinia sclerotiorum 21.43 2.30e+00 27.70
IUUC-Smo-109325 Selaginella moellendorffii 34.83 6.00e-37 147.00
IUUC-Sit-110624 Setaria italica 32.72 5.00e-26 112.00
IUUC-Stu-112433 Solanum tuberosum 33.25 1.00e-29 123.00
IUUC-Sar-113169 Sorex araneus 83.33 2.00e-132 465.00
IUUC-Sbi-114305 Sorghum bicolor 33.12 1.00e-26 114.00
IUUC-Ssc-115766 Sus scrofa 82.38 5.00e-179 620.00
IUUC-Tgu-116469 Taeniopygia guttata 99.41 5.00e-165 573.00
IUUC-Tru-117732 Takifugu rubripes 77.50 4.00e-149 520.00
IUUC-Tsy-119624 Tarsius syrichta 75.00 5.00e-166 577.00
IUUC-Tni-119852 Tetraodon nigroviridis 72.91 1.00e-139 489.00
IUUC-Tca-121865 Theobroma cacao 31.31 3.00e-35 142.00
IUUC-Tae-125925 Triticum aestivum 35.95 2.00e-27 116.00
IUUC-Tur-126237 Triticum urartu 35.35 3.00e-26 112.00
IUUC-Tbe-128148 Tupaia belangeri 72.82 2.00e-137 481.00
IUUC-Ttr-128793 Tursiops truncatus 81.95 6.00e-175 606.00
IUUC-Vpa-130625 Vicugna pacos 68.72 7.00e-137 480.00
IUUC-Vvi-131312 Vitis vinifera 35.88 2.00e-18 86.70
IUUC-Xtr-131790 Xenopus tropicalis 82.73 2.00e-171 595.00
IUUC-Xma-133377 Xiphophorus maculatus 77.62 3.00e-155 541.00
Created Date 25-Jun-2017

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