iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Vvi-131312

Ensembl Protein ID

VIT_08s0056g00830.t01

UniProt Accession

F6HMV3; F6HMV3_VITVI

Genbank Protein ID

CCB55978.1

Protein Name

Presenilin

Genbank Nucleotide ID

FN595995

Gene Name

PS1; VIT_08s0056g00830

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
VIT_08s0056g00830	VIT_08s0056g00830.t01	VIT_08s0056g00830.t01

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/CUE	31.92	2.00e-39	159.00	IUUC-Cel-018553
UBD/Alpha-Helix/CUE	33.67	5.00e-29	126.00	IUUC-Dre-028689

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Vitis vinifera

Functional Description
(View)

Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors.

Protein Sequence
(Fasta)

MDSSILDSLG VEIIGVMSPV SVCMLLVVLL VYTLSSATSS AASDTIRTAA NLVYLESPSD 60
STTQKLEGAL LNALVFIVLI AIVTFVLVLL YYYNFTNFLK NYMRFSAFFV LGTMGGSIFL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

CCATGGATTC GAGCATTCTC GATTCTCTCG GAGTCGAAAT CATTGGCGTG ATGTCGCCGG 60
TCTCAGTCTG CATGCTCCTG GTGGTTCTCC TCGTTTACAC CCTCTCCTCC GCCACCTCCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0256--Endoplasmic reticulum
KW-0333--Golgi apparatus
KW-0378--Hydrolase
KW-0472--Membrane
KW-0914--Notch signaling pathway
KW-0645--Protease
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix

Interpro

IPR001108--Peptidase_A22A
IPR006639--Preselin/SPP

Pfam

PF01080--Presenilin

PRINTS

PR01072--PRESENILIN

SMART

SM00730--PSN

Gene Ontology

GO:0005789--C:endoplasmic reticulum membrane
GO:0000139--C:Golgi membrane
GO:0005887--C:integral component of plasma membrane
GO:0005634--C:nucleus
GO:0004190--F:aspartic-type endopeptidase activity
GO:0004175--F:endopeptidase activity
GO:0007219--P:Notch signaling pathway
GO:0016485--P:protein processing

KEGG

vvi:100263915

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000686	Aegilops tauschii	53.16	2.00e-83	303.00
IUUC-Aml-001648	Ailuropoda melanoleuca	38.79	9.00e-36	143.00
IUUC-Atr-003039	Amborella trichopoda	61.80	9.00e-134	469.00
IUUC-Apl-003959	Anas platyrhynchos	30.43	1.00e-22	99.80
IUUC-Aca-004582	Anolis carolinensis	33.91	4.00e-34	138.00
IUUC-Aly-005455	Arabidopsis lyrata	64.83	2.00e-136	477.00
IUUC-Ath-006730	Arabidopsis thaliana	64.69	2.00e-137	481.00
IUUC-Ame-010686	Astyanax mexicanus	33.25	1.00e-34	139.00
IUUC-Bta-013026	Bos taurus	35.15	8.00e-36	143.00
IUUC-Bdi-014196	Brachypodium distachyon	53.76	4.00e-96	344.00
IUUC-Bol-015841	Brassica oleracea	67.03	3.00e-128	450.00
IUUC-Bra-017580	Brassica rapa	82.51	2.00e-66	244.00
IUUC-Cel-018553	Caenorhabditis elegans	32.07	1.00e-42	166.00
IUUC-Cja-019994	Callithrix jacchus	35.16	4.00e-37	148.00
IUUC-Cfa-020074	Canis familiaris	34.66	1.00e-35	143.00
IUUC-Cpo-022237	Cavia porcellus	35.16	3.00e-36	145.00
IUUC-Cre-022747	Chlamydomonas reinhardtii	46.28	8.00e-48	184.00
IUUC-Csa-023537	Chlorocebus sabaeus	35.66	1.00e-36	146.00
IUUC-Cho-024735	Choloepus hoffmanni	36.42	4.00e-37	148.00
IUUC-Cin-025780	Ciona intestinalis	33.50	1.00e-40	159.00
IUUC-Csv-025967	Ciona savignyi	33.42	1.00e-40	159.00
IUUC-Dre-028689	Danio rerio	33.42	6.00e-31	127.00
IUUC-Dno-029758	Dasypus novemcinctus	34.16	7.00e-35	140.00
IUUC-Dor-030609	Dipodomys ordii	41.32	2.00e-19	89.40
IUUC-Dme-031929	Drosophila melanogaster	31.63	3.00e-39	155.00
IUUC-Ete-032487	Echinops telfairi	35.08	2.00e-17	82.80
IUUC-Eca-034387	Equus caballus	35.35	9.00e-27	113.00
IUUC-Eeu-035134	Erinaceus europaeus	37.04	2.00e-35	142.00
IUUC-Fca-036243	Felis catus	35.91	3.00e-36	145.00
IUUC-Fal-036600	Ficedula albicollis	35.80	3.00e-33	135.00
IUUC-Gmo-038550	Gadus morhua	33.17	2.00e-23	102.00
IUUC-Gga-040993	Gallus gallus	34.32	1.00e-34	140.00
IUUC-Gac-042511	Gasterosteus aculeatus	32.75	2.00e-35	142.00
IUUC-Gma-043822	Glycine max	67.35	2.00e-52	198.00
IUUC-Ggo-044859	Gorilla gorilla	37.50	3.00e-23	101.00
IUUC-Hsa-046822	Homo sapiens	35.66	9.00e-37	147.00
IUUC-Hvu-047141	Hordeum vulgare	54.33	1.00e-90	326.00
IUUC-Itr-048420	Ictidomys tridecemlineatus	36.64	2.00e-37	148.00
IUUC-Lch-049638	Latimeria chalumnae	36.67	5.00e-27	114.00
IUUC-Lpe-051132	Leersia perrieri	52.64	3.00e-92	331.00
IUUC-Loc-052427	Lepisosteus oculatus	32.41	6.00e-39	154.00
IUUC-Laf-053979	Loxodonta africana	36.45	9.00e-31	127.00
IUUC-Mcc-055682	Macaca mulatta	35.66	9.00e-37	147.00
IUUC-Meu-056004	Macropus eugenii	36.46	1.00e-22	99.80
IUUC-Mtr-058392	Medicago truncatula	63.62	4.00e-120	423.00
IUUC-Mga-059466	Meleagris gallopavo	33.66	5.00e-34	137.00
IUUC-Mmr-060890	Microcebus murinus	35.48	5.00e-26	111.00
IUUC-Mdo-062122	Monodelphis domestica	35.07	3.00e-36	145.00
IUUC-Mmu-063823	Mus musculus	35.35	8.00e-27	114.00
IUUC-Mac-064858	Musa acuminata	88.89	6.00e-42	163.00
IUUC-Mpu-065927	Mustela putorius furo	35.41	2.00e-35	142.00
IUUC-Mlu-067079	Myotis lucifugus	35.16	1.00e-40	160.00
IUUC-Nle-070180	Nomascus leucogenys	35.66	9.00e-37	147.00
IUUC-Opr-070847	Ochotona princeps	37.91	7.00e-22	97.40
IUUC-Ont-071846	Oreochromis niloticus	34.95	3.00e-21	95.50
IUUC-Oan-072783	Ornithorhynchus anatinus	37.77	1.00e-33	135.00
IUUC-Ocu-074527	Oryctolagus cuniculus	35.91	2.00e-34	139.00
IUUC-Oba-075256	Oryza barthii	51.21	8.00e-83	299.00
IUUC-Obr-076302	Oryza brachyantha	51.52	2.00e-90	325.00
IUUC-Ogl-077097	Oryza glaberrima	51.16	3.00e-90	324.00
IUUC-Ogu-078570	Oryza glumaepatula	53.10	5.00e-90	323.00
IUUC-Oin-079244	Oryza indica	51.92	5.00e-90	323.00
IUUC-Olo-080484	Oryza longistaminata	49.68	2.00e-61	228.00
IUUC-Ome-081814	Oryza meridionalis	51.63	1.00e-91	329.00
IUUC-Oni-082057	Oryza nivara	51.89	7.00e-86	310.00
IUUC-Opu-084176	Oryza punctata	54.37	7.00e-92	330.00
IUUC-Oru-084618	Oryza rufipogon	53.33	4.00e-90	324.00
IUUC-Osa-085602	Oryza sativa	53.43	4.00e-91	327.00
IUUC-Ola-086707	Oryzias latipes	33.16	4.00e-24	104.00
IUUC-Olu-087811	Ostreococcus lucimarinus	36.18	9.00e-56	209.00
IUUC-Oga-088560	Otolemur garnettii	34.85	7.00e-26	110.00
IUUC-Oar-090348	Ovis aries	34.90	1.00e-36	146.00
IUUC-Ptr-091060	Pan troglodytes	35.66	9.00e-37	147.00
IUUC-Pan-091855	Papio anubis	37.50	1.00e-22	99.80
IUUC-Psi-093505	Pelodiscus sinensis	33.83	1.00e-35	143.00
IUUC-Pma-094612	Petromyzon marinus	42.06	2.00e-20	92.80
IUUC-Ppa-095431	Physcomitrella patens	45.35	2.00e-88	318.00
IUUC-Pfo-097396	Poecilia formosa	31.92	3.00e-35	142.00
IUUC-Pab-098591	Pongo abelii	35.66	9.00e-37	147.00
IUUC-Pop-099661	Populus trichocarpa	49.89	1.00e-85	309.00
IUUC-Pca-101120	Procavia capensis	35.36	8.00e-22	97.40
IUUC-Ppe-101495	Prunus persica	74.41	2.00e-163	567.00
IUUC-Pva-102244	Pteropus vampyrus	34.09	1.00e-35	143.00
IUUC-Rno-105861	Rattus norvegicus	34.58	5.00e-22	98.20
IUUC-Sha-107045	Sarcophilus harrisii	35.57	1.00e-36	146.00
IUUC-Smo-109325	Selaginella moellendorffii	45.96	5.00e-64	237.00
IUUC-Sit-110624	Setaria italica	50.62	4.00e-87	314.00
IUUC-Sly-110865	Solanum lycopersicum	88.57	1.00e-32	130.00
IUUC-Stu-112433	Solanum tuberosum	65.08	2.00e-121	427.00
IUUC-Sar-113169	Sorex araneus	37.15	9.00e-34	137.00
IUUC-Sbi-114305	Sorghum bicolor	54.24	9.00e-90	323.00
IUUC-Ssc-115766	Sus scrofa	34.66	3.00e-36	145.00
IUUC-Tgu-116469	Taeniopygia guttata	36.65	5.00e-34	137.00
IUUC-Tru-117732	Takifugu rubripes	31.92	4.00e-31	128.00
IUUC-Tsy-119624	Tarsius syrichta	45.79	5.00e-22	98.20
IUUC-Tni-119852	Tetraodon nigroviridis	33.01	3.00e-30	125.00
IUUC-Tca-121865	Theobroma cacao	75.27	2.00e-150	525.00
IUUC-Tae-123984	Triticum aestivum	53.65	4.00e-89	320.00
IUUC-Tur-126237	Triticum urartu	53.08	2.00e-83	301.00
IUUC-Tbe-128148	Tupaia belangeri	45.79	2.00e-22	99.00
IUUC-Ttr-128793	Tursiops truncatus	38.23	2.00e-33	135.00
IUUC-Vpa-130625	Vicugna pacos	36.02	7.00e-31	127.00
IUUC-Xtr-132756	Xenopus tropicalis	32.35	9.00e-28	117.00
IUUC-Xma-133377	Xiphophorus maculatus	31.76	7.00e-33	134.00

Created Date

25-Jun-2017

Functional Description

Protein Fasta Sequence

Nucleotide Fasta Sequence