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Tag Content
UUCD2 ID IUUC-Ppa-095999
UUCD1 version UUC-PhP-00333
Ensembl Protein ID PP1S25_325V6.1
UniProt Accession A9RZ23; A9RZ23_PHYPA
Genbank Protein ID EDQ75759.1
Protein Name Predicted protein
Genbank Nucleotide ID DS544926
Gene Name PHYPADRAFT_121847
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
PP1S25_325V6 PP1S25_325V6.1 PP1S25_325V6.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 7.90e-26 89.8 549 586
E3 activity/RING/U-box 3.00e-08 34.3 31 90
UBD/Beta-Prp 3.50e-41 142.1 368 673
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.sdtllvsGsdDgtikvWDlrtgvllk 37
    gH v+ ++f s++ l+s+s D t+++WD+ t+ + +
   Q: 549 GHRKAVSYVKFiSSNELASASTDSTLRLWDVQTDSCAR 586
    79999*******889*******************9976 PP
   


   E3 activity/RING/U-box

   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwlasggktcPvtrqplteedlvPnltlrrli 65
    +flCpI l+ M+d + +G+++ s+I +l++ + cP + + lt + l+Pn l +l
   Q: 31 DFLCPICLQTMEDAFLTRCGHSFCYSCIMTHLNNRSN-CPCCAEYLTIDLLMPNFLLTKLM 90
    8*********************************999.****************9987765 PP
   


   UBD/Beta-Prp

   S: 5    lkghhksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae.........vtavkfspdgk.ilvtgseDrtikvwdlstgkcvht 89
    l+++ ++ +++++f d++l+at++ +++ikv+d+ t ++ l + + +++++++ k +++++ +++ vwd++ ++ v+
   Q: 368 LFQTSSNIVSSIDFDGDDELFATAGVSRRIKVFDFAT--VMNDLTDVHCPvaefptrskLSCLSWNKFNKpLIASSDYEGIVTVWDINRSQSVME 460
    567788999***************************9..5445533333335555555599***999876455555555**************** PP
   S: 90 lkghedsvlslsfspsg.dklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdg.nllvsGslDrtvrlWdlktg.kllrtltgghtd 181
    +++he++++s++fs+++ + lvsGs+d +++w ++++ + +++ + + ++cv+++p + n ++ Gs+D + +dl++ + l ++g h +
   Q: 461 YEEHEKRAWSVDFSRTDpSMLVSGSDDGKVKLWCTNQEASVFSIDMK--ANICCVKYNPGSsNHIAIGSADHHIYYYDLRNPsNPLVVFKG-HRK 552
    ***************888***************66666666444444..449********9******************775168999999.*** PP
   S: 182 svyslsfdsngkelvsgsldgtvklwdlqtgecvrtlnghtdnvksvrfspnderlvsgssDgsiriWdlrsgdllktlqlhn............ 264
    +v ++f s ++el+s+s+d+t++lwd+qt +c rt++ght+ + v ++ n++++++gs+ + + ++ + + k + h+
   Q: 553 AVSYVKFIS-SNELASASTDSTLRLWDVQTDSCARTFRGHTNEKNFVGLTVNNDYIACGSETNEVVVYH---KAMSKPCSSHKfgspnsediedd 643
    ******999.68*******************************************************93...4444444444444455******* PP
   S: 265 .ssvisvavlsfgdnvlvlgsedskvniwk 293
    s++is +++ + + ++++ + ++++++
   Q: 644 gSHFISAVCWKSESPTMLAANSQGIIKVLV 673
    **************************9975 PP
   

Organism Physcomitrella patens
Protein Sequence
(Fasta)
MGFEDEEPFG ASSGEQKYES AIRARAELDR DFLCPICLQT MEDAFLTRCG HSFCYSCIMT 60
HLNNRSNCPC CAEYLTIDLL MPNFLLTKLM KKASAFKMLK NASPADPLLL ALQQGADLPA 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ppa-095999|E3,WD_repeat;E3,U-box;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGGGGTTTG AAGACGAGGA GCCGTTCGGA GCGTCCTCTG GAGAGCAAAA GTATGAGTCT 60
GCTATTCGCG CTAGGGCAGA ATTGGACCGA GACTTTTTAT GTCCAATTTG CCTACAGACA 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ppa-095999|E3,WD_repeat;E3,U-box;UBD,Beta-Prp|Physcomitrella patens
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00184--RING
SM00320--WD40

Gene Ontology

GO:0008270--F:zinc ion binding

KEGG ppp:PHYPADRAFT_121847
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ame-011176 Astyanax mexicanus 61.98 4.00e-44 171.00
IUUC-Cme-027350 Cyanidioschyzon merolae 46.09 5.00e-96 345.00
IUUC-Dor-031110 Dipodomys ordii 54.75 2.00e-97 349.00
IUUC-Ete-033016 Echinops telfairi 54.75 5.00e-97 348.00
Created Date 25-Jun-2017

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