iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pma-094598

Ensembl Protein ID

ENSPMAP00000006606.1

UniProt Accession

S4RN20; S4RN20_PETMA

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSPMAG00000005975.1	ENSPMAT00000006636.1	ENSPMAP00000006606.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	9.00e-06	25.2	321	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 5    svtclaf..sd.tllvsGsdD...gtikvWDlrtgvll 36
           ++ claf  ++ +ll++  dD   +++ vWD+ +g++l
   Q: 321  GILCLAFskTNcGLLCA-VDDgneHVLSVWDWQQGNKL 357
           699****9855466555.4444559999****999875 PP

Organism

Petromyzon marinus

Protein Sequence
(Fasta)

CPDDVGPSEG LAGGDGGGAE LVERLSALEQ RVAMQEDEIH ILKAALADVI RRLHAAPDGM 60
ASPPGLLARR GPTKAVGRQG LVSLPSRPSI GNGANTPRKA TPPSSYSPTP GLAEKNCSIW 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TGCCCAGATG ACGTGGGCCC CTCGGAGGGC TTGGCCGGCG GGGACGGCGG TGGCGCCGAG 60
CTGGTGGAGC GGCTCTCCGC CCTGGAGCAG CGCGTCGCCA TGCAGGAGGA CGAGATCCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil

Interpro

IPR005108--HELP
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF03451--HELP
PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cho-024398	Choloepus hoffmanni	58.96	2.00e-103	369.00
IUUC-Eeu-034661	Erinaceus europaeus	45.71	4.00e-60	224.00
IUUC-Ppa-095656	Physcomitrella patens	24.47	6.00e-09	55.80
IUUC-Pca-100247	Procavia capensis	67.37	4.00e-95	340.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence