iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Gma-043919

UUCD1 version

UUC-GlM-03778

Ensembl Protein ID

GLYMA11G36401.1

UniProt Accession

K7LRW5; K7LRW5_SOYBN

Genbank Protein ID

KRH31596.1; KRH31597.1

Protein Name

Ubiquitinyl hydrolase 1

Genbank Nucleotide ID

CM000844; CM000844

Gene Name

LOC100776156; GLYMA_11G256600

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
GLYMA11G36401	GLYMA11G36401.1	GLYMA11G36401.1
GLYMA11G36401	GLYMA11G36401.3	GLYMA11G36401.3

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	2.40e-79	268.6	230	979

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaeefsgyeqqDaq 93
           G+ NlgNtC++NS++Q L++++ lr+++l+     l+      p g+l++sl+klf+e    ++ k++++pr+++ ++++++++f+gy+q+D++
   Q: 230  GMINLGNTCFFNSIMQNLLAMNRLRDDFLK-----LD-----APVGPLISSLKKLFTETNpeSGLKNVINPRSFFGCVCSKSPQFRGYQQHDSH 313
           9*****************************.....43.....4789*************99999****************************** PP
   S: 94   EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvpgkeetkke.. 185
           E+l++lld+l++e           + +     +++ +++ + +++++l++ lF+gq++s++ c ec++ s+ +epfldls+pvp k+    +  
   Q: 314  ELLRCLLDGLSTEE----------LAGR----KQSGSPKGDGTSSNTLVDALFGGQISSTVCCIECGHFSTVYEPFLDLSVPVPTKKPP--Pck 391
           ***********999..........3333....3445678899******************************************99955..245 PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 392  aqqvprtkkaklppkkggktrvrvnrdtyplpvqtqsnqlsssesscpdqsvisvagemgtcsadstllgseeiksvadkedlsspnlvtpges 485
           999******************************************************************************************* PP
   S: 186  .............................................................................................. 185
                                                                                                         
   Q: 486  qhmqvldngaiktsdgfswldyveagtnecdfisqkedapevqgteskdeclnelhgqaicessglvcflkedenlspkfssangwedkvplqv 579
           ********************************************************************************************** PP
   S: 186  ...........................................................................................slq 188
                                                                                                      s++
   Q: 580  qgsevlllpykeesssaaeiiggdgeasssvlgggqeevefdgfgdlfnepevvagpaprpsscrevmeagfiisnsesdpdevddtdspvSVE 673
           ********************************************************************************************** PP
   S: 189  dcLesftkeeelegenkyycekck...................................................................... 212
           +cL++f k+e l +en+++ce+c                                                                       
   Q: 674  SCLAHFIKPELLLDENAWHCENCSkflqhqkmeekkharavsdgnetgiydepwhavnscsvkvrtngngdikndtnvenlvacdkhntkleng 767
           ********************************************************************************************** PP
   S: 213  ...............................................................................kkqeaekklklkklP 227
                                                                                           k++a+k++ + k P
   Q: 768  qrdelslivnerdsgssemedthidelqsssfrntcneescshlaadscvienvqrrdspmigndnndseeeagsksvkVKRDATKRVLIYKAP 861
           ******************************************************99999999999999999999999988888*********** PP
   S: 228  evLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvHsGslssGHYvayvkn............ekgk...W 306
           +vL++hLkRfs + + ++ +k+n +v+f +++d++p+   ++ ++ ek++Y L++ v HsG++++GHYvayv+             +  +   W
   Q: 862  PVLTIHLKRFSQDAR-GRLSKLNGHVNFRETMDIRPYIDPRCINE-EKYEYHLVGLVEHSGTMRGGHYVAYVRGgqrnsgkggdkeN--EgstW 951
           **********77665.8899********************99997.5***************************8888888776542..1568* PP
   S: 307  llfdDskVtevkeeevleetgstaYvlfYkr 337
           ++ +D +V+ev+ +evl+   ++aY+lfY++
   Q: 952  YQASDAYVREVSLDEVLR---CEAYILFYEK 979
           ******************...********97 PP

Organism

Glycine max

Protein Sequence
(Fasta)

MGKKVRKKTR GSAKEKGVAT HLPIKVIESS NPTVESVDEV AKETNSCPHL VKGVNFDRLS 60
TKIGSSGSVR CEDCREGAND RRSGKGKGKH EKKKGGASLD SKSESKSIWV CLECGRYTCG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATTTTTATGT AGCGAGTGCT GCTAGGATTT GTAAAGGGAG GGGAACCAAT TTTGTCAAAA 60
GACTTCATGT TTCCATACAT TTCAATACCT TATTGATGTT TTAATAAAAA TCTTTCTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0479--Metal-binding
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR018200--USP_CS
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS00972--USP_1
PS00973--USP_2
PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

KEGG

gmx:100776156

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-004145	Anas platyrhynchos	29.92	3.00e-36	147.00
IUUC-Ame-011659	Astyanax mexicanus	26.93	2.00e-28	121.00
IUUC-Bdi-014624	Brachypodium distachyon	33.96	3.00e-75	276.00
IUUC-Bol-015191	Brassica oleracea	44.54	3.00e-119	422.00
IUUC-Cja-019177	Callithrix jacchus	27.79	1.00e-29	125.00
IUUC-Cho-024315	Choloepus hoffmanni	40.35	3.00e-17	84.00
IUUC-Cin-025775	Ciona intestinalis	36.88	2.00e-18	84.70
IUUC-Dor-030443	Dipodomys ordii	42.28	6.00e-26	112.00
IUUC-Eeu-034835	Erinaceus europaeus	42.28	4.00e-26	113.00
IUUC-Gac-042343	Gasterosteus aculeatus	28.74	1.00e-33	138.00
IUUC-Hsa-046598	Homo sapiens	27.16	7.00e-29	122.00
IUUC-Lpe-050703	Leersia perrieri	31.24	1.00e-69	258.00
IUUC-Mdo-062220	Monodelphis domestica	30.89	3.00e-33	137.00
IUUC-Nle-069252	Nomascus leucogenys	27.53	3.00e-29	124.00
IUUC-Opr-070969	Ochotona princeps	28.31	3.00e-28	120.00
IUUC-Oba-075094	Oryza barthii	32.70	1.00e-72	268.00
IUUC-Obr-076743	Oryza brachyantha	31.56	4.00e-70	259.00
IUUC-Ogl-077739	Oryza glaberrima	32.70	1.00e-72	268.00
IUUC-Ogu-078851	Oryza glumaepatula	32.54	1.00e-72	268.00
IUUC-Oin-079402	Oryza indica	32.54	3.00e-72	267.00
IUUC-Olo-080431	Oryza longistaminata	32.38	3.00e-72	266.00
IUUC-Ome-081580	Oryza meridionalis	31.90	1.00e-72	268.00
IUUC-Oni-082644	Oryza nivara	32.54	3.00e-72	267.00
IUUC-Opu-083452	Oryza punctata	33.07	1.00e-74	275.00
IUUC-Oru-084546	Oryza rufipogon	32.54	3.00e-72	266.00
IUUC-Osa-085858	Oryza sativa	32.54	5.00e-72	266.00
IUUC-Pca-101069	Procavia capensis	40.94	2.00e-26	114.00
IUUC-Pva-103092	Pteropus vampyrus	33.09	4.00e-26	113.00
IUUC-Sha-106889	Sarcophilus harrisii	30.79	1.00e-30	128.00
IUUC-Sja-107712	Schizosaccharomyces japonicus	30.46	6.00e-15	76.30
IUUC-Spo-108149	Schizosaccharomyces pombe	35.50	1.00e-21	99.00
IUUC-Tgu-117478	Taeniopygia guttata	29.17	2.00e-34	140.00
IUUC-Ttr-128271	Tursiops truncatus	29.09	9.00e-32	132.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence