iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Cgl-026613

Ensembl Protein ID

ELA36128

UniProt Accession

L2GDL6; L2GDL6_COLGN

Genbank Protein ID

ELA36128.1

Protein Name

Phd transcription factor

Genbank Nucleotide ID

KB020533

Gene Name

CGGC5_4303

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
CGGC5_4303	ELA36128	ELA36128

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	3.50e-16	58.8	1337	1383

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 2    kvClvCgeggedekslveCekCrewfHpaClklsveeelpnsekwiCpkCr 52
           ++C +C++ ++++  ++eCe C+ew+H +Clk++   ++++++k++Cp C+
   Q: 1337 VFC-ICRKIEAGM--MIECELCHEWYHGKCLKIA-RGKVKDEDKYTCPICD 1383
           79*.*******86..*******************.999999999******6 PP

Organism

Colletotrichum gloeosporioides

Protein Sequence
(Fasta)

MVSAAATSAA NGTGSANASS RASPAVGATT ASAKSKAAQV NSNGYHPTNP QIPLSSMRST 60
PLDLTSVERR GQATAIKEPT KKKSRPHGLE DAPTYCPTEE EWKDPMEYIK KISPEAQNYG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGTGTCTG CTGCAGCAAC CTCCGCTGCC AACGGCACCG GCAGTGCAAA TGCCAGCTCC 60
AGAGCCTCGC CAGCCGTCGG AGCCACCACC GCCTCTGCCA AATCCAAGGC CGCCCAGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001606--ARID_dom
IPR003347--JmjC_dom
IPR003349--JmjN
IPR013637--Lys_sp_deMease-like_dom
IPR019786--Zinc_finger_PHD-type_CS
IPR004198--Znf_C5HC2
IPR011011--Znf_FYVE_PHD
IPR001965--Znf_PHD
IPR019787--Znf_PHD-finger
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51011--ARID
PS51184--JMJC
PS51183--JMJN
PS01359--ZF_PHD_1
PS50016--ZF_PHD_2
PS50089--ZF_RING_2

Pfam

PF01388--ARID
PF02373--JmjC
PF02375--JmjN
PF00628--PHD
PF08429--PLU-1
PF02928--zf-C5HC2

SMART

SM00501--BRIGHT
SM00558--JmjC
SM00545--JmjN
SM00249--PHD

Gene Ontology

GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0016706--F:oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors
GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000552	Aegilops tauschii	36.32	1.00e-83	303.00
IUUC-Aml-001963	Ailuropoda melanoleuca	30.16	4.00e-110	391.00
IUUC-Atr-002595	Amborella trichopoda	37.47	1.00e-85	310.00
IUUC-Apl-004141	Anas platyrhynchos	32.23	4.00e-103	368.00
IUUC-Aca-004952	Anolis carolinensis	32.23	4.00e-101	361.00
IUUC-Aly-006097	Arabidopsis lyrata	45.71	4.00e-07	50.10
IUUC-Ath-007218	Arabidopsis thaliana	42.86	9.00e-07	48.90
IUUC-Ago-007848	Ashbya gossypii	28.57	8.00e-06	43.90
IUUC-Acl-008162	Aspergillus clavatus	57.88	0.00e+00	1739.00
IUUC-Afl-008625	Aspergillus flavus	58.73	0.00e+00	1719.00
IUUC-Afu-008796	Aspergillus fumigatus	57.95	0.00e+00	1737.00
IUUC-Ani-009139	Aspergillus nidulans	57.20	0.00e+00	1715.00
IUUC-Aor-010155	Aspergillus oryzae	58.67	0.00e+00	1717.00
IUUC-Ate-010453	Aspergillus terreus	57.89	0.00e+00	1720.00
IUUC-Ame-011323	Astyanax mexicanus	30.02	2.00e-118	419.00
IUUC-Bgr-012241	Blumeria graminis	64.64	0.00e+00	2001.00
IUUC-Bta-012902	Bos taurus	31.38	1.00e-102	367.00
IUUC-Bci-013992	Botrytis cinerea	66.20	0.00e+00	2053.00
IUUC-Bdi-014050	Brachypodium distachyon	36.15	2.00e-85	309.00
IUUC-Bol-015336	Brassica oleracea	24.80	1.00e-10	62.00
IUUC-Bra-017998	Brassica rapa	34.92	8.00e-10	58.90
IUUC-Cja-019050	Callithrix jacchus	30.06	9.00e-111	394.00
IUUC-Cfa-021015	Canis familiaris	30.06	1.00e-108	386.00
IUUC-Cpo-022340	Cavia porcellus	34.13	2.00e-105	375.00
IUUC-Cre-022637	Chlamydomonas reinhardtii	40.82	2.00e-07	44.70
IUUC-Csa-023441	Chlorocebus sabaeus	33.95	4.00e-107	381.00
IUUC-Cho-024280	Choloepus hoffmanni	37.86	4.00e-93	335.00
IUUC-Cin-025321	Ciona intestinalis	27.84	3.00e-106	378.00
IUUC-Csv-026185	Ciona savignyi	30.04	3.00e-97	348.00
IUUC-Cne-026851	Cryptococcus neoformans	33.89	2.00e-152	532.00
IUUC-Cme-027118	Cyanidioschyzon merolae	28.85	2.00e-03	36.20
IUUC-Dre-027909	Danio rerio	28.77	2.00e-108	385.00
IUUC-Dno-028978	Dasypus novemcinctus	29.95	6.00e-108	384.00
IUUC-Dor-030226	Dipodomys ordii	28.97	5.00e-76	278.00
IUUC-Dse-031479	Dothistroma septosporum	55.77	0.00e+00	1624.00
IUUC-Dme-032021	Drosophila melanogaster	30.40	2.00e-108	386.00
IUUC-Ete-032760	Echinops telfairi	26.24	7.00e-69	254.00
IUUC-Eca-034370	Equus caballus	33.73	5.00e-107	381.00
IUUC-Eeu-034692	Erinaceus europaeus	31.64	1.00e-93	336.00
IUUC-Fca-035494	Felis catus	33.87	9.00e-108	383.00
IUUC-Fal-037631	Ficedula albicollis	30.63	3.00e-112	398.00
IUUC-Fox-037694	Fusarium oxysporum	63.70	0.00e+00	1747.00
IUUC-Fso-038127	Fusarium solani	67.98	0.00e+00	2249.00
IUUC-Gmo-039522	Gadus morhua	34.57	1.00e-106	380.00
IUUC-Ggr-039929	Gaeumannomyces graminis	69.23	0.00e+00	2191.00
IUUC-Gga-040802	Gallus gallus	30.87	8.00e-111	394.00
IUUC-Gac-042566	Gasterosteus aculeatus	29.84	1.00e-113	403.00
IUUC-Gma-044327	Glycine max	37.28	7.00e-79	288.00
IUUC-Ggo-045492	Gorilla gorilla	31.64	3.00e-94	338.00
IUUC-Hsa-045888	Homo sapiens	33.51	5.00e-108	384.00
IUUC-Hvu-047583	Hordeum vulgare	32.26	8.00e-09	54.30
IUUC-Itr-048297	Ictidomys tridecemlineatus	31.94	1.00e-107	383.00
IUUC-Kpa-049245	Komagataella pastoris	24.48	5.00e-63	235.00
IUUC-Lch-050517	Latimeria chalumnae	30.06	9.00e-112	397.00
IUUC-Lpe-051537	Leersia perrieri	40.16	4.00e-85	308.00
IUUC-Loc-052550	Lepisosteus oculatus	30.23	6.00e-108	384.00
IUUC-Lma-053053	Leptosphaeria maculans	30.16	3.00e-04	39.30
IUUC-Laf-053761	Loxodonta africana	30.26	2.00e-109	389.00
IUUC-Mcc-055505	Macaca mulatta	33.95	3.00e-107	382.00
IUUC-Meu-056643	Macropus eugenii	31.96	1.00e-96	346.00
IUUC-Mor-057198	Magnaporthe oryzae	70.07	0.00e+00	2187.00
IUUC-Mpo-057317	Magnaporthe poae	70.37	0.00e+00	2226.00
IUUC-Mtr-058113	Medicago truncatula	42.01	2.00e-78	286.00
IUUC-Mga-059358	Meleagris gallopavo	31.05	3.00e-111	395.00
IUUC-Mvi-060436	Microbotryum violaceum	48.94	2.00e-10	59.30
IUUC-Mmr-061032	Microcebus murinus	31.64	1.00e-90	326.00
IUUC-Mdo-061957	Monodelphis domestica	30.21	4.00e-108	384.00
IUUC-Mmu-063944	Mus musculus	33.16	3.00e-104	372.00
IUUC-Mac-065069	Musa acuminata	37.70	1.00e-04	41.60
IUUC-Mpu-066719	Mustela putorius furo	29.66	2.00e-110	392.00
IUUC-Mlu-067363	Myotis lucifugus	29.31	2.00e-105	376.00
IUUC-Nfi-068430	Neosartorya fischeri	58.57	0.00e+00	1733.00
IUUC-Ncr-068763	Neurospora crassa	70.50	0.00e+00	2202.00
IUUC-Nle-069256	Nomascus leucogenys	33.60	3.00e-107	382.00
IUUC-Opr-071002	Ochotona princeps	45.82	9.00e-79	287.00
IUUC-Ont-072471	Oreochromis niloticus	30.11	3.00e-116	412.00
IUUC-Oan-073568	Ornithorhynchus anatinus	29.87	7.00e-111	394.00
IUUC-Ocu-073961	Oryctolagus cuniculus	29.79	4.00e-110	391.00
IUUC-Oba-075388	Oryza barthii	34.44	7.00e-70	258.00
IUUC-Obr-076296	Oryza brachyantha	32.11	2.00e-75	276.00
IUUC-Ogl-077886	Oryza glaberrima	28.87	3.00e-11	62.40
IUUC-Ogu-079040	Oryza glumaepatula	34.93	3.00e-70	259.00
IUUC-Oin-079273	Oryza indica	40.38	2.00e-08	50.10
IUUC-Olo-080668	Oryza longistaminata	28.87	8.00e-11	62.00
IUUC-Ome-081764	Oryza meridionalis	38.04	6.00e-84	304.00
IUUC-Oni-083012	Oryza nivara	34.44	1.00e-69	257.00
IUUC-Opu-083164	Oryza punctata	37.93	4.00e-82	298.00
IUUC-Oru-084630	Oryza rufipogon	34.44	5.00e-70	258.00
IUUC-Osa-085487	Oryza sativa	28.87	4.00e-11	62.00
IUUC-Ola-087076	Oryzias latipes	32.22	2.00e-101	362.00
IUUC-Oga-088191	Otolemur garnettii	31.87	7.00e-95	341.00
IUUC-Oar-090045	Ovis aries	31.13	2.00e-102	365.00
IUUC-Ptr-091199	Pan troglodytes	31.59	3.00e-102	365.00
IUUC-Pan-092094	Papio anubis	28.83	8.00e-114	404.00
IUUC-Psi-093550	Pelodiscus sinensis	32.55	3.00e-97	348.00
IUUC-Pma-094137	Petromyzon marinus	31.89	4.00e-101	361.00
IUUC-Pno-094879	Phaeosphaeria nodorum	55.41	0.00e+00	1635.00
IUUC-Ppa-095893	Physcomitrella patens	37.23	6.00e-10	59.70
IUUC-Pfo-097266	Poecilia formosa	29.16	1.00e-112	399.00
IUUC-Pab-098576	Pongo abelii	31.59	2.00e-102	366.00
IUUC-Pop-099061	Populus trichocarpa	41.38	2.00e-03	35.00
IUUC-Pca-100446	Procavia capensis	31.88	6.00e-94	338.00
IUUC-Ppe-101504	Prunus persica	37.28	7.00e-83	301.00
IUUC-Pva-103035	Pteropus vampyrus	33.07	2.00e-103	369.00
IUUC-Pgr-103434	Puccinia graminis	35.03	7.00e-36	142.00
IUUC-Pte-104195	Pyrenophora teres	57.93	0.00e+00	1669.00
IUUC-Pyt-104566	Pyrenophora triticirepentis	57.25	0.00e+00	1663.00
IUUC-Rno-105574	Rattus norvegicus	29.11	2.00e-104	372.00
IUUC-Sce-106207	Saccharomyces cerevisiae	40.71	1.00e-71	262.00
IUUC-Sha-107506	Sarcophilus harrisii	47.76	3.00e-92	332.00
IUUC-Sja-107970	Schizosaccharomyces japonicus	30.27	3.00e-141	494.00
IUUC-Spo-108283	Schizosaccharomyces pombe	31.27	1.00e-154	539.00
IUUC-Ssl-108489	Sclerotinia sclerotiorum	68.00	0.00e+00	2075.00
IUUC-Sit-110534	Setaria italica	29.50	3.00e-87	315.00
IUUC-Sly-111298	Solanum lycopersicum	36.98	1.00e-85	310.00
IUUC-Stu-111932	Solanum tuberosum	45.71	1.00e-06	44.70
IUUC-Sar-113052	Sorex araneus	31.67	1.00e-100	360.00
IUUC-Sbi-114173	Sorghum bicolor	39.53	2.00e-07	48.10
IUUC-Sre-115161	Sporisorium reilianum	34.17	0.00e+00	706.00
IUUC-Ssc-116132	Sus scrofa	34.27	2.00e-108	385.00
IUUC-Tgu-117452	Taeniopygia guttata	30.81	9.00e-108	383.00
IUUC-Tru-118604	Takifugu rubripes	30.33	6.00e-119	421.00
IUUC-Tsy-119271	Tarsius syrichta	29.67	1.00e-95	343.00
IUUC-Tni-120779	Tetraodon nigroviridis	29.34	7.00e-115	407.00
IUUC-Tca-121478	Theobroma cacao	36.98	2.00e-84	306.00
IUUC-Tre-122213	Trichoderma reesei	66.28	0.00e+00	1964.00
IUUC-Tvi-122263	Trichoderma virens	67.31	0.00e+00	1987.00
IUUC-Tae-125894	Triticum aestivum	37.39	4.00e-84	305.00
IUUC-Tur-126632	Triticum urartu	36.54	5.00e-84	305.00
IUUC-Tme-127087	Tuber melanosporum	57.18	0.00e+00	1644.00
IUUC-Tbe-128040	Tupaia belangeri	38.69	2.00e-89	322.00
IUUC-Ttr-128979	Tursiops truncatus	32.04	7.00e-94	337.00
IUUC-Uma-129590	Ustilago maydis	34.95	0.00e+00	720.00
IUUC-Vda-129733	Verticillium dahliae	75.48	0.00e+00	2592.00
IUUC-Vpa-130433	Vicugna pacos	34.22	1.00e-91	329.00
IUUC-Vvi-131071	Vitis vinifera	39.71	2.00e-67	249.00
IUUC-Xtr-131762	Xenopus tropicalis	32.40	5.00e-102	364.00
IUUC-Xma-133693	Xiphophorus maculatus	29.42	3.00e-111	395.00
IUUC-Yli-134436	Yarrowia lipolytica	26.92	6.00e-04	37.40
IUUC-Zma-135829	Zea mays	35.42	3.00e-83	302.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence