iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Cpo-021871

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAKN02049208

Gene Name

SEC13

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCPOG00000015707.3	ENSCPOT00000015862.2	ENSCPOP00000014162.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	7.20e-29	98.6	209	243

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf......sdtllvsGsdDgtikvWD 29
           gH+d+v+++a+      ++ +++s+s Dg + +W 
   Q: 209  GHSDWVRDVAWapsiglPTSTIASCSQDGRVFIWT 243
           8***********999987777*************5 PP

Organism

Cavia porcellus

Protein Sequence
(Fasta)

VSVINTVDTS HEDMIHDAQM DYYGTRLATC SSDRSVKIFD VRNGGQILIA DLRGHEGPVW 60
QVAWAHPMYG SILASCSYDR KVIIWKEENG TWEKTHEHSG HDSSVNSVCW APHDYGLILA 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTCTGTAA TTAACACCGT GGACACCTCC CATGAGGACA TGATTGTAAG TATTCACTTA 60
AGCTTTCTAA GGCTTTAGAC ATAGGCGTTT CCATGGGAGT TAAGCAGTTT GGGCTTCTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0070062--C:extracellular exosome
GO:0061700--C:GATOR2 complex
GO:0000776--C:kinetochore
GO:0031080--C:nuclear pore outer ring
GO:0005654--C:nucleoplasm
GO:0032008--P:positive regulation of TOR signaling

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000671	Aegilops tauschii	54.82	7.00e-92	330.00
IUUC-Aml-001832	Ailuropoda melanoleuca	95.95	0.00e+00	637.00
IUUC-Atr-002914	Amborella trichopoda	55.85	1.00e-91	329.00
IUUC-Apl-003992	Anas platyrhynchos	92.16	1.00e-167	581.00
IUUC-Aca-005283	Anolis carolinensis	91.90	1.00e-175	608.00
IUUC-Aly-005654	Arabidopsis lyrata	55.33	1.00e-90	326.00
IUUC-Ath-006816	Arabidopsis thaliana	56.00	5.00e-91	327.00
IUUC-Ago-007827	Ashbya gossypii	50.00	3.00e-83	301.00
IUUC-Acl-008205	Aspergillus clavatus	51.50	1.00e-80	292.00
IUUC-Afl-008748	Aspergillus flavus	51.14	3.00e-83	301.00
IUUC-Afu-008791	Aspergillus fumigatus	51.50	1.00e-80	293.00
IUUC-Ani-009152	Aspergillus nidulans	50.16	3.00e-83	301.00
IUUC-Ang-009765	Aspergillus niger	51.14	2.00e-83	302.00
IUUC-Aor-009927	Aspergillus oryzae	51.00	3.00e-80	291.00
IUUC-Ate-010248	Aspergillus terreus	50.81	4.00e-83	301.00
IUUC-Ame-011478	Astyanax mexicanus	85.98	6.00e-166	576.00
IUUC-Bgr-012276	Blumeria graminis	50.00	2.00e-79	289.00
IUUC-Bta-012700	Bos taurus	94.70	0.00e+00	630.00
IUUC-Bci-013722	Botrytis cinerea	49.50	7.00e-82	296.00
IUUC-Bdi-014818	Brachypodium distachyon	55.15	3.00e-92	331.00
IUUC-Bol-015779	Brassica oleracea	56.80	1.00e-90	326.00
IUUC-Bra-016973	Brassica rapa	55.97	2.00e-90	327.00
IUUC-Cel-018479	Caenorhabditis elegans	41.85	1.00e-69	256.00
IUUC-Cja-019956	Callithrix jacchus	95.82	6.00e-165	573.00
IUUC-Cfa-020752	Canis familiaris	96.88	0.00e+00	641.00
IUUC-Cre-022797	Chlamydomonas reinhardtii	55.30	1.00e-96	345.00
IUUC-Csa-023393	Chlorocebus sabaeus	95.64	0.00e+00	637.00
IUUC-Cho-024786	Choloepus hoffmanni	74.77	3.00e-132	464.00
IUUC-Cin-025332	Ciona intestinalis	70.03	3.00e-131	461.00
IUUC-Csv-025926	Ciona savignyi	69.38	1.00e-128	452.00
IUUC-Cgl-026413	Colletotrichum gloeosporioides	52.22	6.00e-80	290.00
IUUC-Cne-027054	Cryptococcus neoformans	50.00	9.00e-79	286.00
IUUC-Cme-027165	Cyanidioschyzon merolae	34.66	5.00e-51	196.00
IUUC-Dre-027782	Danio rerio	87.23	7.00e-168	582.00
IUUC-Dno-029628	Dasypus novemcinctus	95.95	0.00e+00	637.00
IUUC-Dor-030650	Dipodomys ordii	79.13	3.00e-143	500.00
IUUC-Dse-031206	Dothistroma septosporum	47.19	3.00e-78	284.00
IUUC-Dme-031854	Drosophila melanogaster	58.28	7.00e-101	360.00
IUUC-Ete-032618	Echinops telfairi	66.98	1.00e-117	416.00
IUUC-Eca-033268	Equus caballus	95.95	0.00e+00	637.00
IUUC-Fca-035918	Felis catus	95.95	0.00e+00	636.00
IUUC-Fal-037551	Ficedula albicollis	90.91	7.00e-157	546.00
IUUC-Fox-037763	Fusarium oxysporum	49.34	1.00e-81	296.00
IUUC-Fso-038341	Fusarium solani	48.52	3.00e-80	291.00
IUUC-Gmo-038638	Gadus morhua	87.23	2.00e-169	587.00
IUUC-Ggr-039865	Gaeumannomyces graminis	49.33	2.00e-78	285.00
IUUC-Gga-040193	Gallus gallus	91.90	1.00e-174	605.00
IUUC-Gma-044311	Glycine max	55.18	1.00e-91	330.00
IUUC-Ggo-045252	Gorilla gorilla	95.33	0.00e+00	635.00
IUUC-Hsa-046565	Homo sapiens	95.02	0.00e+00	632.00
IUUC-Hvu-047835	Hordeum vulgare	56.15	1.00e-93	335.00
IUUC-Itr-048587	Ictidomys tridecemlineatus	96.57	0.00e+00	639.00
IUUC-Kpa-049148	Komagataella pastoris	52.98	1.00e-87	316.00
IUUC-Lch-050421	Latimeria chalumnae	88.47	8.00e-171	592.00
IUUC-Lpe-051187	Leersia perrieri	53.49	2.00e-92	334.00
IUUC-Loc-052167	Lepisosteus oculatus	86.96	1.00e-167	581.00
IUUC-Lma-053250	Leptosphaeria maculans	51.34	2.00e-80	291.00
IUUC-Laf-054304	Loxodonta africana	95.64	0.00e+00	634.00
IUUC-Mcc-055519	Macaca mulatta	95.33	0.00e+00	635.00
IUUC-Meu-056439	Macropus eugenii	93.46	4.00e-180	623.00
IUUC-Mor-057241	Magnaporthe oryzae	49.32	1.00e-77	282.00
IUUC-Mpo-057373	Magnaporthe poae	43.73	4.00e-63	234.00
IUUC-Mtr-058412	Medicago truncatula	55.18	1.00e-89	322.00
IUUC-Mla-058966	Melampsora laricipopulina	49.24	3.00e-87	315.00
IUUC-Mga-060066	Meleagris gallopavo	92.16	1.00e-167	581.00
IUUC-Mvi-060290	Microbotryum violaceum	47.09	1.00e-81	298.00
IUUC-Mmr-060717	Microcebus murinus	96.88	0.00e+00	640.00
IUUC-Mdo-062496	Monodelphis domestica	93.46	2.00e-180	624.00
IUUC-Mmu-063490	Mus musculus	96.57	0.00e+00	641.00
IUUC-Mac-065307	Musa acuminata	55.63	8.00e-89	320.00
IUUC-Mpu-066601	Mustela putorius furo	96.88	0.00e+00	641.00
IUUC-Mlu-067501	Myotis lucifugus	95.95	0.00e+00	637.00
IUUC-Nfi-068360	Neosartorya fischeri	50.38	3.00e-66	244.00
IUUC-Ncr-068928	Neurospora crassa	49.16	5.00e-82	297.00
IUUC-Nle-069028	Nomascus leucogenys	95.02	0.00e+00	634.00
IUUC-Opr-070446	Ochotona princeps	94.77	1.00e-173	602.00
IUUC-Ont-071587	Oreochromis niloticus	85.67	8.00e-169	585.00
IUUC-Oan-073211	Ornithorhynchus anatinus	90.97	3.00e-176	610.00
IUUC-Ocu-074306	Oryctolagus cuniculus	94.08	1.00e-180	625.00
IUUC-Oba-075069	Oryza barthii	54.82	1.00e-91	329.00
IUUC-Obr-076667	Oryza brachyantha	55.15	3.00e-92	331.00
IUUC-Ogl-077208	Oryza glaberrima	54.82	1.00e-91	329.00
IUUC-Ogu-078513	Oryza glumaepatula	54.82	1.00e-91	329.00
IUUC-Oin-079094	Oryza indica	54.82	1.00e-91	329.00
IUUC-Olo-080473	Oryza longistaminata	54.82	1.00e-91	329.00
IUUC-Ome-081643	Oryza meridionalis	54.82	1.00e-91	329.00
IUUC-Oni-082589	Oryza nivara	54.82	1.00e-91	329.00
IUUC-Opu-083677	Oryza punctata	54.82	1.00e-91	329.00
IUUC-Oru-084537	Oryza rufipogon	54.82	1.00e-91	329.00
IUUC-Osa-085449	Oryza sativa	54.82	1.00e-91	329.00
IUUC-Ola-087226	Oryzias latipes	85.98	3.00e-167	580.00
IUUC-Olu-087893	Ostreococcus lucimarinus	50.68	5.00e-79	287.00
IUUC-Oga-088837	Otolemur garnettii	96.88	0.00e+00	642.00
IUUC-Oar-089594	Ovis aries	94.70	0.00e+00	630.00
IUUC-Ptr-091132	Pan troglodytes	95.02	0.00e+00	633.00
IUUC-Psi-093568	Pelodiscus sinensis	92.21	5.00e-169	586.00
IUUC-Pma-094172	Petromyzon marinus	71.97	1.00e-62	231.00
IUUC-Pno-094955	Phaeosphaeria nodorum	49.67	6.00e-79	287.00
IUUC-Ppa-095835	Physcomitrella patens	56.11	2.00e-92	332.00
IUUC-Pfo-096063	Poecilia formosa	86.60	6.00e-168	582.00
IUUC-Pab-098674	Pongo abelii	95.02	0.00e+00	632.00
IUUC-Pop-099402	Populus trichocarpa	55.33	2.00e-91	328.00
IUUC-Pca-100824	Procavia capensis	77.57	1.00e-141	495.00
IUUC-Ppe-101707	Prunus persica	55.18	3.00e-89	322.00
IUUC-Pva-103161	Pteropus vampyrus	92.21	2.00e-176	611.00
IUUC-Pgr-103573	Puccinia graminis	53.56	2.00e-90	325.00
IUUC-Ptt-103700	Puccinia triticina	52.87	3.00e-84	304.00
IUUC-Pte-104267	Pyrenophora teres	50.00	7.00e-78	283.00
IUUC-Pyt-104535	Pyrenophora triticirepentis	48.64	3.00e-70	258.00
IUUC-Rno-104833	Rattus norvegicus	96.88	0.00e+00	642.00
IUUC-Sce-106437	Saccharomyces cerevisiae	51.50	2.00e-77	281.00
IUUC-Sha-106611	Sarcophilus harrisii	93.46	4.00e-180	623.00
IUUC-Sja-107654	Schizosaccharomyces japonicus	50.00	2.00e-83	302.00
IUUC-Spo-108362	Schizosaccharomyces pombe	52.94	5.00e-87	313.00
IUUC-Smo-109674	Selaginella moellendorffii	55.26	2.00e-93	335.00
IUUC-Sit-110132	Setaria italica	54.49	6.00e-92	330.00
IUUC-Sly-111254	Solanum lycopersicum	53.67	4.00e-87	314.00
IUUC-Stu-112195	Solanum tuberosum	53.97	2.00e-87	315.00
IUUC-Sbi-114229	Sorghum bicolor	54.33	3.00e-92	331.00
IUUC-Sre-114898	Sporisorium reilianum	49.86	3.00e-92	331.00
IUUC-Ssc-115995	Sus scrofa	97.33	3.00e-85	306.00
IUUC-Tgu-116793	Taeniopygia guttata	90.97	4.00e-164	570.00
IUUC-Tru-117797	Takifugu rubripes	86.29	5.00e-168	583.00
IUUC-Tsy-118967	Tarsius syrichta	92.06	2.00e-28	119.00
IUUC-Tni-120366	Tetraodon nigroviridis	85.36	3.00e-167	580.00
IUUC-Tca-121068	Theobroma cacao	55.29	2.00e-89	322.00
IUUC-Tre-121899	Trichoderma reesei	49.50	3.00e-81	295.00
IUUC-Tvi-122380	Trichoderma virens	50.00	6.00e-82	297.00
IUUC-Tae-123998	Triticum aestivum	56.48	2.00e-94	338.00
IUUC-Tur-126202	Triticum urartu	55.81	3.00e-93	334.00
IUUC-Tme-127181	Tuber melanosporum	53.57	8.00e-90	323.00
IUUC-Ttr-128448	Tursiops truncatus	83.49	4.00e-155	540.00
IUUC-Uma-129661	Ustilago maydis	50.14	2.00e-92	332.00
IUUC-Vda-129666	Verticillium dahliae	51.88	1.00e-79	289.00
IUUC-Vpa-130318	Vicugna pacos	95.64	0.00e+00	635.00
IUUC-Vvi-130868	Vitis vinifera	54.67	4.00e-90	324.00
IUUC-Xtr-131859	Xenopus tropicalis	88.16	2.00e-169	587.00
IUUC-Xma-133898	Xiphophorus maculatus	86.92	1.00e-168	585.00
IUUC-Yli-134559	Yarrowia lipolytica	54.24	2.00e-85	308.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence