iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sha-107387

Ensembl Protein ID

ENSSHAP00000018140.1

UniProt Accession

G3WRT5; G3WRT5_SARHA

Genbank Protein ID

ENSSHAP00000018140

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AEFK01215339

Gene Name

LRBA

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSSHAG00000015402.1	ENSSHAT00000018290.1	ENSSHAP00000018140.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	3.50e-07	30.5	2741	2772

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 3    tdsvtclaf.sd.tllvsGsdDgtikvWDlrt 32
            d ++++++  d  +l++G+d+g+++vW + +
   Q: 2741 DDNIRAMQLsRDgQYLLTGGDNGVVMVWQVCD 2772
           5789999999788***************9866 PP

Organism

Sarcophilus harrisii

Protein Sequence
(Fasta)

MASDDSRALS PPPTGDGGAR GAPRDAGALP LKPGIPIRGI RMKFAVLSGL VEVGEVTNRD 60
IVETVFNLLV GGQFDLEMNF IIQEGESIIC MVDLLDKCDI TCQAEVWSMF TAILKKSIRN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GGAGCGGGGC CCGTAAAAGA AAACCCGCCA TGGCCAGCGA CGACAGCCGG GCCCTGTCCC 60
CGCCGCCCAC AGGTGATGGA GGCGCGCGAG GAGCCCCTCG GGACGCCGGC GCGCTGCCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR011989--ARM-like
IPR016024--ARM-type_fold
IPR000409--BEACH_dom
IPR013320--ConA-like_dom
IPR010508--DUF1088
IPR031570--DUF4704
IPR023362--PH-BEACH_dom
IPR011993--PH_dom-like
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50197--BEACH
PS51783--PH_BEACH
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF02138--Beach
PF06469--DUF1088
PF15787--DUF4704
PF14844--PH_BEACH
PF00400--WD40

SMART

SM01026--Beach
SM00320--WD40

Gene Ontology

GO:0016020--C:membrane

KEGG

shr:100915799

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000339	Aegilops tauschii	40.19	7.00e-149	521.00
IUUC-Atr-002998	Amborella trichopoda	38.27	7.00e-143	503.00
IUUC-Apl-003632	Anas platyrhynchos	85.57	0.00e+00	886.00
IUUC-Aca-005124	Anolis carolinensis	80.47	0.00e+00	4588.00
IUUC-Aly-005407	Arabidopsis lyrata	38.93	2.00e-145	510.00
IUUC-Ath-007674	Arabidopsis thaliana	38.44	2.00e-143	504.00
IUUC-Ame-011487	Astyanax mexicanus	70.69	3.00e-179	620.00
IUUC-Bta-012509	Bos taurus	80.60	0.00e+00	4507.00
IUUC-Bdi-015051	Brachypodium distachyon	33.81	1.00e-147	517.00
IUUC-Bol-015261	Brassica oleracea	33.74	2.00e-140	494.00
IUUC-Bra-016877	Brassica rapa	37.90	4.00e-139	490.00
IUUC-Cja-018744	Callithrix jacchus	94.25	0.00e+00	1512.00
IUUC-Cfa-020786	Canis familiaris	83.97	0.00e+00	4787.00
IUUC-Cpo-021636	Cavia porcellus	82.32	0.00e+00	4611.00
IUUC-Ete-032481	Echinops telfairi	89.22	0.00e+00	1311.00
IUUC-Eca-033893	Equus caballus	83.27	0.00e+00	4741.00
IUUC-Fca-035726	Felis catus	95.14	0.00e+00	1012.00
IUUC-Fal-036871	Ficedula albicollis	79.84	0.00e+00	4526.00
IUUC-Gga-041206	Gallus gallus	79.62	0.00e+00	4593.00
IUUC-Gma-042772	Glycine max	40.05	4.00e-149	523.00
IUUC-Hsa-045763	Homo sapiens	70.61	0.00e+00	769.00
IUUC-Hvu-047134	Hordeum vulgare	40.05	1.00e-151	530.00
IUUC-Itr-048852	Ictidomys tridecemlineatus	84.64	0.00e+00	4779.00
IUUC-Lch-050027	Latimeria chalumnae	85.94	0.00e+00	1395.00
IUUC-Lpe-050958	Leersia perrieri	39.95	2.00e-146	514.00
IUUC-Loc-052771	Lepisosteus oculatus	77.70	0.00e+00	2488.00
IUUC-Laf-053724	Loxodonta africana	83.31	0.00e+00	4762.00
IUUC-Mcc-055200	Macaca mulatta	93.72	0.00e+00	1507.00
IUUC-Mtr-058372	Medicago truncatula	38.90	1.00e-142	502.00
IUUC-Mga-059851	Meleagris gallopavo	91.07	0.00e+00	1721.00
IUUC-Mmr-061112	Microcebus murinus	83.80	0.00e+00	4791.00
IUUC-Mdo-062727	Monodelphis domestica	92.29	0.00e+00	4630.00
IUUC-Mmu-064194	Mus musculus	94.08	0.00e+00	1507.00
IUUC-Mac-064991	Musa acuminata	36.93	3.00e-147	518.00
IUUC-Mpu-066074	Mustela putorius furo	84.97	0.00e+00	4806.00
IUUC-Mlu-067308	Myotis lucifugus	81.71	0.00e+00	4578.00
IUUC-Oan-073413	Ornithorhynchus anatinus	95.97	0.00e+00	1534.00
IUUC-Ocu-074483	Oryctolagus cuniculus	85.74	0.00e+00	2284.00
IUUC-Oba-075426	Oryza barthii	41.00	3.00e-147	517.00
IUUC-Obr-076907	Oryza brachyantha	40.62	3.00e-147	517.00
IUUC-Ogl-077620	Oryza glaberrima	36.58	8.00e-141	494.00
IUUC-Ogu-078751	Oryza glumaepatula	41.35	4.00e-149	523.00
IUUC-Oin-079673	Oryza indica	36.58	5.00e-141	496.00
IUUC-Olo-080417	Oryza longistaminata	36.58	1.00e-140	495.00
IUUC-Ome-081931	Oryza meridionalis	40.37	1.00e-147	518.00
IUUC-Oni-082349	Oryza nivara	41.08	1.00e-147	518.00
IUUC-Opu-083624	Oryza punctata	33.68	4.00e-124	440.00
IUUC-Oru-085197	Oryza rufipogon	40.87	4.00e-147	517.00
IUUC-Osa-085645	Oryza sativa	33.61	8.00e-30	123.00
IUUC-Ola-087242	Oryzias latipes	73.71	0.00e+00	2145.00
IUUC-Olu-087890	Ostreococcus lucimarinus	35.28	2.00e-122	432.00
IUUC-Oga-088409	Otolemur garnettii	88.96	0.00e+00	2705.00
IUUC-Oar-089217	Ovis aries	83.83	0.00e+00	4721.00
IUUC-Ppa-095295	Physcomitrella patens	37.28	1.00e-141	498.00
IUUC-Pop-099604	Populus trichocarpa	38.34	3.00e-142	501.00
IUUC-Pca-100240	Procavia capensis	87.20	0.00e+00	1568.00
IUUC-Ppe-101836	Prunus persica	37.97	5.00e-146	513.00
IUUC-Rno-104971	Rattus norvegicus	93.92	0.00e+00	1592.00
IUUC-Smo-109504	Selaginella moellendorffii	38.99	6.00e-139	488.00
IUUC-Sit-110075	Setaria italica	39.78	3.00e-144	508.00
IUUC-Sly-111033	Solanum lycopersicum	38.98	4.00e-143	503.00
IUUC-Sbi-113954	Sorghum bicolor	51.10	2.00e-110	393.00
IUUC-Tgu-117304	Taeniopygia guttata	79.27	0.00e+00	4210.00
IUUC-Tru-118226	Takifugu rubripes	72.70	0.00e+00	1191.00
IUUC-Tni-120595	Tetraodon nigroviridis	64.61	0.00e+00	1006.00
IUUC-Tca-121572	Theobroma cacao	39.46	1.00e-147	518.00
IUUC-Tae-123372	Triticum aestivum	40.22	1.00e-129	456.00
IUUC-Tur-126212	Triticum urartu	39.78	1.00e-145	511.00
IUUC-Ttr-128452	Tursiops truncatus	77.06	0.00e+00	2814.00
IUUC-Vvi-130860	Vitis vinifera	39.81	7.00e-145	509.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence