iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062535

Ensembl Protein ID

ENSMODP00000001085.2

UniProt Accession

F6ZHF4; F6ZHF4_MONDO

Protein Name

Uncharacterized protein

Gene Name

LDB2

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000000910.3	ENSMODT00000001106.3	ENSMODP00000001085.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
E3 activity/RING/U-box	63.34	2.00e-122	436.00	IUUC-Dme-031667

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

LQAGKMSSTP HDPFYSSPFG PFYRRHTPYM VQPEYRIYEM NKRLQSRTED SDNLWWDAFA 60
TEFFEDDATL TLSFCLEDGP KRYTIGRTLI PRYFSTVFEG GVTDLYYILK HSKESYHNSS 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGTGTGTGC GCGTGTGTGT GCGCGCAGCT ACTTTGTACT GGGAAGAACA CACAGCCCAT 60
GTGCTCTGTA TGGATGTTGG TGATACTCTC TATAGCTTGA TTTCCTCCAA GCAGGCAAGA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030174--LDB2
IPR029005--LIM-bd/SEUSS

Gene Ontology

GO:0031252--C:cell leading edge
GO:0005730--C:nucleolus
GO:0005886--C:plasma membrane
GO:0005667--C:transcription factor complex
GO:0000989--F:transcription factor activity, transcription factor binding
GO:0010669--P:epithelial structure maintenance
GO:0001942--P:hair follicle development
GO:0044089--P:positive regulation of cellular component biogenesis
GO:0045944--P:positive regulation of transcription from RNA polymerase II promoter
GO:0030334--P:regulation of cell migration
GO:0043549--P:regulation of kinase activity
GO:0035019--P:somatic stem cell population maintenance

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000177	Aegilops tauschii	24.06	6.00e-04	40.00
IUUC-Aml-002031	Ailuropoda melanoleuca	76.67	3.00e-152	531.00
IUUC-Atr-003083	Amborella trichopoda	20.36	2.00e-04	42.00
IUUC-Apl-004210	Anas platyrhynchos	76.53	9.00e-121	426.00
IUUC-Aca-005241	Anolis carolinensis	78.77	9.00e-159	553.00
IUUC-Aly-006204	Arabidopsis lyrata	24.56	2.00e-06	47.80
IUUC-Ath-007339	Arabidopsis thaliana	24.56	2.00e-06	47.80
IUUC-Ame-010910	Astyanax mexicanus	73.74	8.00e-152	529.00
IUUC-Bgr-012180	Blumeria graminis	22.61	7.00e-07	49.30
IUUC-Bta-012596	Bos taurus	95.98	0.00e+00	666.00
IUUC-Bci-013927	Botrytis cinerea	28.57	2.00e-08	55.10
IUUC-Bol-015721	Brassica oleracea	23.95	9.00e-07	49.30
IUUC-Bra-017183	Brassica rapa	24.40	9.00e-07	49.30
IUUC-Cel-018189	Caenorhabditis elegans	34.22	3.00e-29	123.00
IUUC-Cja-019586	Callithrix jacchus	98.12	0.00e+00	692.00
IUUC-Cfa-021188	Canis familiaris	76.67	6.00e-152	530.00
IUUC-Cpo-022350	Cavia porcellus	77.65	7.00e-155	540.00
IUUC-Csa-023816	Chlorocebus sabaeus	77.93	1.00e-156	546.00
IUUC-Cho-024958	Choloepus hoffmanni	80.10	2.00e-93	335.00
IUUC-Cin-025721	Ciona intestinalis	53.11	3.00e-94	338.00
IUUC-Csv-026065	Ciona savignyi	56.35	9.00e-98	350.00
IUUC-Dre-027356	Danio rerio	82.56	0.00e+00	633.00
IUUC-Dno-029918	Dasypus novemcinctus	77.04	1.00e-147	516.00
IUUC-Dor-030634	Dipodomys ordii	77.65	2.00e-156	545.00
IUUC-Dse-031245	Dothistroma septosporum	25.00	4.00e-04	40.00
IUUC-Dme-031667	Drosophila melanogaster	63.56	1.00e-123	436.00
IUUC-Ete-032246	Echinops telfairi	95.44	0.00e+00	666.00
IUUC-Eca-034015	Equus caballus	98.12	0.00e+00	694.00
IUUC-Eeu-034902	Erinaceus europaeus	77.65	2.00e-156	545.00
IUUC-Fca-035903	Felis catus	77.22	8.00e-155	540.00
IUUC-Fal-037407	Ficedula albicollis	98.39	0.00e+00	669.00
IUUC-Gmo-039466	Gadus morhua	75.21	5.00e-160	556.00
IUUC-Ggr-040030	Gaeumannomyces graminis	23.98	3.00e-05	44.30
IUUC-Gga-040214	Gallus gallus	78.21	6.00e-156	543.00
IUUC-Gac-042214	Gasterosteus aculeatus	75.07	4.00e-161	560.00
IUUC-Gma-042794	Glycine max	24.34	1.00e-08	55.50
IUUC-Ggo-044988	Gorilla gorilla	98.12	0.00e+00	698.00
IUUC-Hsa-046092	Homo sapiens	97.86	0.00e+00	686.00
IUUC-Itr-047934	Ictidomys tridecemlineatus	77.65	2.00e-156	545.00
IUUC-Lch-049895	Latimeria chalumnae	89.56	3.00e-111	394.00
IUUC-Lpe-050806	Leersia perrieri	26.76	5.00e-05	43.50
IUUC-Loc-052845	Lepisosteus oculatus	77.65	1.00e-157	549.00
IUUC-Lma-053090	Leptosphaeria maculans	25.20	3.00e-06	47.40
IUUC-Laf-054538	Loxodonta africana	76.69	3.00e-159	554.00
IUUC-Mcc-055116	Macaca mulatta	96.41	6.00e-157	546.00
IUUC-Meu-056777	Macropus eugenii	72.07	3.00e-140	491.00
IUUC-Mpo-057376	Magnaporthe poae	24.28	2.00e-05	45.10
IUUC-Mtr-058142	Medicago truncatula	25.38	4.00e-08	53.90
IUUC-Mga-059716	Meleagris gallopavo	97.32	0.00e+00	664.00
IUUC-Mmr-060649	Microcebus murinus	97.59	0.00e+00	692.00
IUUC-Mmu-064036	Mus musculus	95.98	0.00e+00	684.00
IUUC-Mac-065338	Musa acuminata	24.02	7.00e-06	46.60
IUUC-Mpu-065719	Mustela putorius furo	77.65	2.00e-156	545.00
IUUC-Mlu-067219	Myotis lucifugus	76.67	2.00e-153	535.00
IUUC-Ncr-068691	Neurospora crassa	20.61	4.00e-04	40.40
IUUC-Nle-068983	Nomascus leucogenys	98.31	0.00e+00	657.00
IUUC-Opr-070467	Ochotona princeps	77.65	2.00e-156	545.00
IUUC-Ont-071566	Oreochromis niloticus	76.26	6.00e-162	563.00
IUUC-Oan-073368	Ornithorhynchus anatinus	77.93	6.00e-156	543.00
IUUC-Ocu-074854	Oryctolagus cuniculus	97.49	0.00e+00	663.00
IUUC-Ola-086364	Oryzias latipes	76.54	2.00e-161	561.00
IUUC-Oga-088235	Otolemur garnettii	96.78	0.00e+00	680.00
IUUC-Oar-089547	Ovis aries	76.67	5.00e-152	530.00
IUUC-Ptr-091423	Pan troglodytes	98.12	0.00e+00	692.00
IUUC-Pan-092378	Papio anubis	77.93	6.00e-157	546.00
IUUC-Psi-093638	Pelodiscus sinensis	98.39	0.00e+00	674.00
IUUC-Pma-094384	Petromyzon marinus	65.17	2.00e-53	201.00
IUUC-Pno-095027	Phaeosphaeria nodorum	22.18	7.00e-07	49.30
IUUC-Pfo-096031	Poecilia formosa	75.70	5.00e-163	566.00
IUUC-Pab-097886	Pongo abelii	98.31	0.00e+00	657.00
IUUC-Pop-099430	Populus trichocarpa	25.82	1.00e-06	48.50
IUUC-Pca-101138	Procavia capensis	77.65	2.00e-156	545.00
IUUC-Ppe-101293	Prunus persica	24.11	2.00e-07	51.20
IUUC-Pva-103215	Pteropus vampyrus	97.86	0.00e+00	697.00
IUUC-Pte-104238	Pyrenophora teres	29.49	1.00e-05	44.70
IUUC-Rno-105968	Rattus norvegicus	96.25	0.00e+00	684.00
IUUC-Sha-107595	Sarcophilus harrisii	77.09	2.00e-153	535.00
IUUC-Sja-107950	Schizosaccharomyces japonicus	16.97	3.00e-05	43.10
IUUC-Ssl-108527	Sclerotinia sclerotiorum	24.68	3.00e-06	47.00
IUUC-Smo-109552	Selaginella moellendorffii	20.08	5.00e-06	47.00
IUUC-Sly-110873	Solanum lycopersicum	26.09	4.00e-07	50.40
IUUC-Stu-112586	Solanum tuberosum	20.96	5.00e-06	46.60
IUUC-Sar-113076	Sorex araneus	91.13	2.00e-135	475.00
IUUC-Sre-115143	Sporisorium reilianum	23.81	1.20e-01	32.00
IUUC-Ssc-115755	Sus scrofa	77.09	1.00e-153	535.00
IUUC-Tgu-117326	Taeniopygia guttata	98.12	0.00e+00	667.00
IUUC-Tru-117858	Takifugu rubripes	85.94	0.00e+00	656.00
IUUC-Tsy-119296	Tarsius syrichta	90.88	7.00e-180	622.00
IUUC-Tni-119822	Tetraodon nigroviridis	75.77	7.00e-160	556.00
IUUC-Tca-120935	Theobroma cacao	25.38	3.00e-08	54.30
IUUC-Tbe-127366	Tupaia belangeri	76.82	3.00e-151	527.00
IUUC-Ttr-128484	Tursiops truncatus	86.86	1.00e-172	598.00
IUUC-Vpa-130304	Vicugna pacos	98.65	1.00e-156	545.00
IUUC-Vvi-131560	Vitis vinifera	23.01	7.00e-06	46.20
IUUC-Xtr-132062	Xenopus tropicalis	78.21	4.00e-156	543.00
IUUC-Xma-134288	Xiphophorus maculatus	76.54	8.00e-163	566.00
IUUC-Yli-134374	Yarrowia lipolytica	20.47	2.00e-03	37.70
IUUC-Zma-135310	Zea mays	24.61	5.00e-04	40.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence