iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017030

Ensembl Protein ID

Bra016385.1-P

UniProt Accession

M4DIQ8; M4DIQ8_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra016385	Bra016385.1	Bra016385.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	1.40e-06	29.7	173	231

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf........kdg.plvlpCgHvfhadClqkw.....pglknssskefrCPlCr 46
           C++Cle+         +    +++ C H+f+  C+ +w        +++ s+   CP+Cr
   Q: 173  CCVCLERVlskptpaeR-KfGILTECDHAFCIGCIRNWrssspSTGMDVNSTLRACPICR 231
           9*****99866555531.1234699*************99998888888899999****8 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MSKRILCKFF AHGACLKGDN CEFSHDWKDP SNNICTFYQR GNCSYGSRCR YEHVKPSRPP 60
HPSPASSSTY LSSPFVSERD LSSSPAWTLA SLDNEVNNTD ATKPEDQPIC SYAAAGDCPR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGAAAA GGTGCTTCCT TAACCTATTT AAACGTGTTT CTTCTCTTGC TTCTTAACGT 60
TTATGCTCAA ACTCCACGAT TCTTAATTGC AATTTGATAA AAAAAAAGTA ATGATTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR018957--Znf_C3HC4_RING-type
IPR000571--Znf_CCCH
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50103--ZF_C3H1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF00097--zf-C3HC4
PF00642--zf-CCCH

SMART

SM00184--RING
SM00356--ZnF_C3H1

Gene Ontology

GO:0008270--F:zinc ion binding

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001937	Ailuropoda melanoleuca	33.43	2.00e-46	179.00
IUUC-Aca-005385	Anolis carolinensis	34.99	2.00e-49	189.00
IUUC-Ame-011246	Astyanax mexicanus	35.17	2.00e-50	192.00
IUUC-Bol-016086	Brassica oleracea	96.44	1.00e-173	601.00
IUUC-Cel-018642	Caenorhabditis elegans	31.50	2.00e-40	159.00
IUUC-Cfa-020166	Canis familiaris	33.33	2.00e-45	176.00
IUUC-Cpo-021887	Cavia porcellus	31.96	5.00e-43	168.00
IUUC-Csa-023930	Chlorocebus sabaeus	33.83	4.00e-47	181.00
IUUC-Cho-024307	Choloepus hoffmanni	33.43	6.00e-48	184.00
IUUC-Cin-025619	Ciona intestinalis	35.45	3.00e-59	221.00
IUUC-Dme-031705	Drosophila melanogaster	42.01	3.00e-36	145.00
IUUC-Ete-032356	Echinops telfairi	40.43	2.00e-22	98.60
IUUC-Eca-033340	Equus caballus	33.63	1.00e-48	186.00
IUUC-Fal-036881	Ficedula albicollis	34.62	3.00e-47	182.00
IUUC-Ggr-039835	Gaeumannomyces graminis	44.00	1.00e-09	57.80
IUUC-Gac-041790	Gasterosteus aculeatus	34.55	5.00e-54	204.00
IUUC-Laf-054551	Loxodonta africana	33.43	7.00e-48	184.00
IUUC-Mga-059767	Meleagris gallopavo	32.94	3.00e-44	172.00
IUUC-Mmr-061574	Microcebus murinus	31.98	9.00e-45	174.00
IUUC-Mdo-061974	Monodelphis domestica	32.56	5.00e-46	178.00
IUUC-Mlu-067691	Myotis lucifugus	33.53	1.00e-47	183.00
IUUC-Nle-069845	Nomascus leucogenys	32.85	3.00e-46	179.00
IUUC-Ont-071561	Oreochromis niloticus	35.37	2.00e-55	209.00
IUUC-Oan-073517	Ornithorhynchus anatinus	51.92	1.00e-12	66.20
IUUC-Oga-088871	Otolemur garnettii	34.30	9.00e-51	194.00
IUUC-Pan-092582	Papio anubis	33.33	1.00e-48	187.00
IUUC-Psi-093168	Pelodiscus sinensis	33.33	2.00e-46	179.00
IUUC-Pfo-096075	Poecilia formosa	34.62	5.00e-54	204.00
IUUC-Pab-098764	Pongo abelii	33.83	4.00e-46	178.00
IUUC-Pca-100903	Procavia capensis	34.42	5.00e-52	198.00
IUUC-Pva-103124	Pteropus vampyrus	38.24	5.00e-30	125.00
IUUC-Sbi-114884	Sorghum bicolor	51.66	4.00e-91	327.00
IUUC-Tgu-116537	Taeniopygia guttata	34.12	1.00e-46	180.00
IUUC-Tru-118205	Takifugu rubripes	34.40	1.00e-54	206.00
IUUC-Tni-120744	Tetraodon nigroviridis	33.74	5.00e-53	201.00
IUUC-Tbe-128131	Tupaia belangeri	33.22	2.00e-38	152.00
IUUC-Ttr-129099	Tursiops truncatus	32.27	2.00e-46	179.00
IUUC-Vpa-130663	Vicugna pacos	36.84	1.00e-29	123.00
IUUC-Xma-134162	Xiphophorus maculatus	34.62	1.00e-53	203.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence