iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062836

Ensembl Protein ID

ENSMODP00000001590.2

UniProt Accession

F7BE06; F7BE06_MONDO

Protein Name

Uncharacterized protein

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000001316.3	ENSMODT00000001623.3	ENSMODP00000001590.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	1.90e-11	43.9	321	357

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf......sdtllvsGsdDgtikvWDlrt 32
           H++sv+ ++        +  +++ + Dg + +WD+++
   Q: 321  HKNSVSQISVltggkaKCSQFCTTGMDGGMSIWDVKS 357
           778888888557666522569*************976 PP

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MAYHSFLIEP ISCHAWNKDR TQIAICPNNH EVHIYKKEGT KWAKAHELKE HNGQVTGEDL 60
FGPKKPILPW GEKPNAYVWT LKGNIWKPTL VILRINRAAR CVRWSPKENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

NNNNNNNNNN NNNNNNNNNN NNNNNNNNNC TCAGAGCAGG ACGGGAAGTG AGCAGGGCGC 60
GGGCAGCCTG GCGGAGCCCT TCACAGCAGG AGGGAGTGAA GGAAAGAAGG AAGGAGGGAG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001709	Ailuropoda melanoleuca	85.37	0.00e+00	656.00
IUUC-Ame-011512	Astyanax mexicanus	77.72	1.00e-179	622.00
IUUC-Bta-012442	Bos taurus	84.64	0.00e+00	648.00
IUUC-Cja-019899	Callithrix jacchus	86.06	0.00e+00	666.00
IUUC-Cfa-020067	Canis familiaris	85.22	0.00e+00	654.00
IUUC-Cpo-022461	Cavia porcellus	86.29	0.00e+00	663.00
IUUC-Csa-023277	Chlorocebus sabaeus	81.72	0.00e+00	634.00
IUUC-Dre-028141	Danio rerio	77.17	8.00e-176	609.00
IUUC-Dor-030559	Dipodomys ordii	86.83	0.00e+00	665.00
IUUC-Ete-032299	Echinops telfairi	84.68	0.00e+00	661.00
IUUC-Eca-033593	Equus caballus	85.25	0.00e+00	657.00
IUUC-Fca-036254	Felis catus	86.02	0.00e+00	663.00
IUUC-Fal-037453	Ficedula albicollis	85.44	0.00e+00	662.00
IUUC-Gmo-038471	Gadus morhua	69.35	9.00e-156	542.00
IUUC-Gga-040898	Gallus gallus	85.37	0.00e+00	668.00
IUUC-Gac-042236	Gasterosteus aculeatus	73.09	3.00e-169	587.00
IUUC-Ggo-045355	Gorilla gorilla	72.65	4.00e-156	543.00
IUUC-Hsa-046623	Homo sapiens	85.75	0.00e+00	660.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	86.56	0.00e+00	668.00
IUUC-Lch-049679	Latimeria chalumnae	78.53	1.00e-178	618.00
IUUC-Loc-052140	Lepisosteus oculatus	79.08	1.00e-174	605.00
IUUC-Laf-054287	Loxodonta africana	83.24	0.00e+00	634.00
IUUC-Meu-056302	Macropus eugenii	93.48	0.00e+00	712.00
IUUC-Mga-059279	Meleagris gallopavo	85.37	0.00e+00	668.00
IUUC-Mmr-060752	Microcebus murinus	87.53	0.00e+00	656.00
IUUC-Mmu-064099	Mus musculus	84.57	0.00e+00	650.00
IUUC-Mpu-066247	Mustela putorius furo	85.75	0.00e+00	647.00
IUUC-Mlu-067571	Myotis lucifugus	87.33	0.00e+00	676.00
IUUC-Nle-069492	Nomascus leucogenys	73.12	5.00e-151	526.00
IUUC-Ont-071316	Oreochromis niloticus	75.20	3.00e-168	584.00
IUUC-Oan-072692	Ornithorhynchus anatinus	88.04	0.00e+00	684.00
IUUC-Ocu-074187	Oryctolagus cuniculus	82.53	0.00e+00	637.00
IUUC-Oga-088610	Otolemur garnettii	86.56	0.00e+00	664.00
IUUC-Oar-089639	Ovis aries	84.37	0.00e+00	639.00
IUUC-Ptr-091023	Pan troglodytes	85.75	0.00e+00	660.00
IUUC-Pan-091727	Papio anubis	86.29	0.00e+00	666.00
IUUC-Pfo-097058	Poecilia formosa	74.41	2.00e-169	588.00
IUUC-Pab-098238	Pongo abelii	85.48	0.00e+00	664.00
IUUC-Pca-100580	Procavia capensis	84.41	0.00e+00	644.00
IUUC-Pva-102928	Pteropus vampyrus	83.11	0.00e+00	638.00
IUUC-Rno-104846	Rattus norvegicus	85.75	0.00e+00	659.00
IUUC-Sar-113404	Sorex araneus	87.03	1.00e-123	435.00
IUUC-Tru-118106	Takifugu rubripes	74.34	2.00e-171	595.00
IUUC-Tni-120079	Tetraodon nigroviridis	74.87	3.00e-172	597.00
IUUC-Ttr-128698	Tursiops truncatus	86.02	0.00e+00	662.00
IUUC-Xtr-131893	Xenopus tropicalis	80.49	0.00e+00	629.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence