iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Oan-072692

Ensembl Protein ID

ENSOANP00000012307.1

UniProt Accession

F6QT91; F6QT91_ORNAN

Genbank Protein ID

ENSOANP00000012307

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

AAPN01301425

Gene Name

ARPC1B

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSOANG00000007725.3	ENSOANT00000012309.2	ENSOANP00000012307.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.30e-17	60.9	51	80

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf.sd.tllvsGsdDgtikvWD 29
           H++ vt++++ ++ +++v+++ D + +vW 
   Q: 51   HNGQVTGIDWaPEsNRIVTCGTDRNAYVWT 80
           9**********888***************6 PP

Organism

Ornithorhynchus anatinus

Protein Sequence
(Fasta)

MAYHSFLLEP ISCHAWNKDR TQIALCPNNH EVHIYKKDGA KWTKVHELKE HNGQVTGIDW 60
APESNRIVTC GTDRNAYVWT LKGNLWKPTL VILRINRAAR CVRWSPRENK FAVGSGSRVI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAGCTCCGGG ACACACAGAT GTGGACACGA TCGGGAGAAT TCTCCCTCGG CTCCGGGCGC 60
TCTCTACATT GTCCTGGTCC CGTGAGCAGG CCCGAGGAGC CGAGCCAGCT CCCGTGCAGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR030141--ARC1B
IPR017383--ARPC1
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005885--C:Arp2/3 protein complex
GO:0070062--C:extracellular exosome
GO:0005925--C:focal adhesion
GO:0051015--F:actin filament binding
GO:0005200--F:structural constituent of cytoskeleton
GO:0034314--P:Arp2/3 complex-mediated actin nucleation

KEGG

oaa:100078800

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000669	Aegilops tauschii	45.55	2.00e-64	238.00
IUUC-Aml-001709	Ailuropoda melanoleuca	87.23	0.00e+00	686.00
IUUC-Aly-006568	Arabidopsis lyrata	41.64	2.00e-80	292.00
IUUC-Ath-006683	Arabidopsis thaliana	43.84	2.00e-81	295.00
IUUC-Ame-011512	Astyanax mexicanus	82.07	0.00e+00	661.00
IUUC-Bta-012442	Bos taurus	85.98	0.00e+00	677.00
IUUC-Bdi-014632	Brachypodium distachyon	42.66	4.00e-78	284.00
IUUC-Bol-016274	Brassica oleracea	42.23	6.00e-83	300.00
IUUC-Cja-019899	Callithrix jacchus	88.47	0.00e+00	692.00
IUUC-Cfa-020067	Canis familiaris	87.37	0.00e+00	687.00
IUUC-Cpo-022461	Cavia porcellus	88.44	0.00e+00	695.00
IUUC-Cre-022590	Chlamydomonas reinhardtii	35.20	4.00e-35	140.00
IUUC-Csa-023277	Chlorocebus sabaeus	83.06	0.00e+00	660.00
IUUC-Dre-028141	Danio rerio	80.43	0.00e+00	645.00
IUUC-Dor-030559	Dipodomys ordii	89.25	0.00e+00	702.00
IUUC-Ete-032299	Echinops telfairi	86.56	0.00e+00	690.00
IUUC-Eca-033593	Equus caballus	86.86	0.00e+00	683.00
IUUC-Fca-036254	Felis catus	87.90	0.00e+00	693.00
IUUC-Fal-037453	Ficedula albicollis	89.76	0.00e+00	702.00
IUUC-Gmo-038471	Gadus morhua	71.24	7.00e-165	572.00
IUUC-Gga-040898	Gallus gallus	90.24	0.00e+00	713.00
IUUC-Gac-042236	Gasterosteus aculeatus	75.20	2.00e-177	614.00
IUUC-Gma-042803	Glycine max	43.20	5.00e-81	293.00
IUUC-Ggo-045355	Gorilla gorilla	72.39	3.00e-157	546.00
IUUC-Hsa-046623	Homo sapiens	88.17	0.00e+00	694.00
IUUC-Itr-048596	Ictidomys tridecemlineatus	88.98	0.00e+00	700.00
IUUC-Lch-049679	Latimeria chalumnae	80.98	0.00e+00	648.00
IUUC-Lpe-050869	Leersia perrieri	42.90	7.00e-79	286.00
IUUC-Loc-052140	Lepisosteus oculatus	82.07	0.00e+00	640.00
IUUC-Laf-054287	Loxodonta africana	85.11	0.00e+00	664.00
IUUC-Meu-056302	Macropus eugenii	93.48	0.00e+00	731.00
IUUC-Mtr-057659	Medicago truncatula	41.55	9.00e-84	303.00
IUUC-Mga-059279	Meleagris gallopavo	90.51	0.00e+00	715.00
IUUC-Mmr-060752	Microcebus murinus	88.09	0.00e+00	679.00
IUUC-Mdo-062836	Monodelphis domestica	88.04	0.00e+00	684.00
IUUC-Mmu-064099	Mus musculus	86.97	0.00e+00	684.00
IUUC-Mac-064632	Musa acuminata	43.36	7.00e-82	296.00
IUUC-Mpu-066247	Mustela putorius furo	87.63	0.00e+00	677.00
IUUC-Mlu-067571	Myotis lucifugus	88.41	0.00e+00	698.00
IUUC-Nle-069492	Nomascus leucogenys	75.81	5.00e-162	562.00
IUUC-Ont-071316	Oreochromis niloticus	77.31	1.00e-178	617.00
IUUC-Ocu-074187	Oryctolagus cuniculus	85.75	0.00e+00	674.00
IUUC-Oba-075379	Oryza barthii	43.37	4.00e-79	287.00
IUUC-Obr-076404	Oryza brachyantha	43.17	4.00e-80	290.00
IUUC-Ogl-077409	Oryza glaberrima	40.93	6.00e-73	267.00
IUUC-Ogu-078759	Oryza glumaepatula	43.37	5.00e-79	287.00
IUUC-Oin-079118	Oryza indica	43.41	6.00e-80	290.00
IUUC-Olo-081055	Oryza longistaminata	45.48	4.00e-70	257.00
IUUC-Ome-081281	Oryza meridionalis	43.37	6.00e-79	287.00
IUUC-Oni-083043	Oryza nivara	43.37	4.00e-79	287.00
IUUC-Oru-084839	Oryza rufipogon	43.37	4.00e-79	287.00
IUUC-Osa-085377	Oryza sativa	43.41	8.00e-80	290.00
IUUC-Oga-088610	Otolemur garnettii	88.17	0.00e+00	691.00
IUUC-Oar-089639	Ovis aries	85.44	0.00e+00	667.00
IUUC-Ptr-091023	Pan troglodytes	88.17	0.00e+00	694.00
IUUC-Pan-091727	Papio anubis	88.71	0.00e+00	699.00
IUUC-Ppa-095738	Physcomitrella patens	43.35	1.00e-86	312.00
IUUC-Pfo-097058	Poecilia formosa	75.99	2.00e-177	614.00
IUUC-Pab-098238	Pongo abelii	87.90	0.00e+00	696.00
IUUC-Pca-100580	Procavia capensis	86.29	0.00e+00	676.00
IUUC-Ppe-101681	Prunus persica	44.32	1.00e-82	298.00
IUUC-Pva-102928	Pteropus vampyrus	84.68	0.00e+00	655.00
IUUC-Rno-104846	Rattus norvegicus	87.10	0.00e+00	687.00
IUUC-Smo-108836	Selaginella moellendorffii	45.70	3.00e-84	304.00
IUUC-Sly-111048	Solanum lycopersicum	43.68	4.00e-80	290.00
IUUC-Sar-113404	Sorex araneus	92.89	5.00e-135	473.00
IUUC-Sbi-114685	Sorghum bicolor	43.44	1.00e-78	286.00
IUUC-Tru-118106	Takifugu rubripes	75.66	5.00e-179	619.00
IUUC-Tni-120079	Tetraodon nigroviridis	76.46	2.00e-180	624.00
IUUC-Tae-125810	Triticum aestivum	38.29	2.00e-71	262.00
IUUC-Tur-126640	Triticum urartu	40.33	6.00e-69	253.00
IUUC-Ttr-128698	Tursiops truncatus	87.37	0.00e+00	690.00
IUUC-Vvi-131647	Vitis vinifera	42.86	3.00e-80	291.00
IUUC-Xtr-131893	Xenopus tropicalis	83.20	0.00e+00	662.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence