iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Ncr-068661

Ensembl Protein ID

EAA34479

UniProt Accession

Q7SCL0; Q7SCL0_NEUCR

Genbank Protein ID

EAA34479.1

Protein Name

WD domain-containing protein

Genbank Nucleotide ID

CM002236

Gene Name

NCU03051

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
NCU03051	EAA34479	EAA34479

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	2.70e-48	158.9	606	644
UBD/Beta-Prp	6.80e-87	290.4	278	539

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf..sdtllvsGsdDgtikvWDlrtgvllk 37
           gH+ +v +++   +++l+v++s D++i++W l+ g++ k
   Q: 606  GHKLPVLSMDIsyDNKLIVTSSADKNIRIWGLDFGDCHK 644
           788899998888544********************9975 PP

UBD/Beta-Prp

   S: 9    hksvitcvkfspdksllatgsrdgtikvwdvttgkllrslsgheae....................................................... 54
            k++   v f+p ++++a+ +  +++++w+++++  +++    +                                                         
   Q: 278  SKERAVEVIFHPRRDYFAVHGVEKSVEIWRIRNEAEIKKSLARKRRrrrelaakkgkkeadaeeeddkaddiskadisdvfvqhvivrttgkvrsvawals 378
           4555556899***********************98844443333334566666666677788888888889999999999999999999999999999999 PP
   S: 55   ...................................................vtavkfspdgkilvtgseDrtikvwdlstgkcvhtlkghedsvlslsfsp 104
                                                              ++a+++s+d+k+l+++++ + +k+w+++t++c++t++    ++l++sf p
   Q: 379  qgtkdlqllvggtnnlletytivgkdklkskgdapdynkalavelpghrtdIRALSISSDDKMLASAAN-GSLKIWNIKTNTCIRTFE--CGYALCCSFLP 476
           999999999999999999999999999999999999999999999999999999999999876666665.678999999999999999..89999999999 PP
   S: 105  sgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlk 167
            ++++v+G++   ++++d+ + + le++++ + +++++++vhpdg+ +vsG++D+t ++Wd k
   Q: 477  GDKVVVVGTKEGELQLYDVASASLLESVNAHEGHAIWSLQVHPDGKSVVSGGADKTAKFWDFK 539
           889999999999999999999999999999999999999999999999999999999999973 PP

Organism

Neurospora crassa

Protein Sequence
(Fasta)

MVKSYLKFEP SKSFGVVATS SSNLVWTSSK DKSGTGAGQA IVAANNEVLT WDIKKGELLN 60
RWKDENCKAQ VTAIAQSKTD PDVFAVGYED GSIRLWDSKI STTIVSFNGH KSAITILAFD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ACCCACTGCG CAGCGGCGAC ACGATTGTGC TAGTGGACAT TGAATCGCGA GAGACCTTGC 60
GCATGTTATT TTGGATTGGC ATCTTGTACT AGTGGCTGTC CAATTATCGC AAATATGGTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR007148--SSU_processome_Utp12
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF04003--Utp12
PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0016021--C:integral component of membrane
GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0030515--F:snoRNA binding
GO:0000480--P:endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000447--P:endonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000472--P:endonucleolytic cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

ncr:NCU03051

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000784	Aegilops tauschii	34.37	7.00e-131	459.00
IUUC-Aml-001245	Ailuropoda melanoleuca	38.48	5.00e-170	589.00
IUUC-Atr-002700	Amborella trichopoda	35.09	4.00e-149	520.00
IUUC-Apl-004164	Anas platyrhynchos	36.84	7.00e-130	456.00
IUUC-Aca-004765	Anolis carolinensis	36.05	9.00e-165	572.00
IUUC-Aly-006503	Arabidopsis lyrata	36.11	3.00e-152	531.00
IUUC-Ath-006848	Arabidopsis thaliana	35.34	5.00e-153	533.00
IUUC-Ago-007909	Ashbya gossypii	44.09	0.00e+00	731.00
IUUC-Acl-008238	Aspergillus clavatus	62.47	0.00e+00	1233.00
IUUC-Afl-008544	Aspergillus flavus	62.16	0.00e+00	1207.00
IUUC-Afu-008868	Aspergillus fumigatus	63.28	0.00e+00	1241.00
IUUC-Ani-009367	Aspergillus nidulans	60.37	0.00e+00	1153.00
IUUC-Ang-009732	Aspergillus niger	62.35	0.00e+00	1234.00
IUUC-Aor-010140	Aspergillus oryzae	62.62	0.00e+00	1217.00
IUUC-Ate-010572	Aspergillus terreus	60.33	0.00e+00	1177.00
IUUC-Ame-010956	Astyanax mexicanus	43.90	7.00e-134	469.00
IUUC-Bgr-012296	Blumeria graminis	62.06	0.00e+00	1210.00
IUUC-Bta-012716	Bos taurus	38.06	3.00e-172	597.00
IUUC-Bci-013699	Botrytis cinerea	69.41	0.00e+00	1277.00
IUUC-Bdi-014525	Brachypodium distachyon	35.06	3.00e-150	523.00
IUUC-Bol-015117	Brassica oleracea	37.28	4.00e-157	546.00
IUUC-Bra-016869	Brassica rapa	37.38	1.00e-156	545.00
IUUC-Cel-018570	Caenorhabditis elegans	28.82	4.00e-97	347.00
IUUC-Cja-019425	Callithrix jacchus	37.44	2.00e-171	594.00
IUUC-Cfa-020787	Canis familiaris	39.18	5.00e-172	596.00
IUUC-Cpo-021729	Cavia porcellus	40.18	4.00e-136	476.00
IUUC-Cre-022678	Chlamydomonas reinhardtii	40.74	6.00e-96	343.00
IUUC-Csa-024098	Chlorocebus sabaeus	38.60	5.00e-175	606.00
IUUC-Cho-024495	Choloepus hoffmanni	40.04	3.00e-99	354.00
IUUC-Cin-025245	Ciona intestinalis	33.93	2.00e-97	347.00
IUUC-Cgl-026708	Colletotrichum gloeosporioides	76.50	0.00e+00	1406.00
IUUC-Cne-026835	Cryptococcus neoformans	41.94	0.00e+00	653.00
IUUC-Cme-027162	Cyanidioschyzon merolae	27.56	9.00e-56	210.00
IUUC-Dre-027874	Danio rerio	36.50	7.00e-178	615.00
IUUC-Dno-028905	Dasypus novemcinctus	38.60	1.00e-170	591.00
IUUC-Dor-030383	Dipodomys ordii	32.56	1.00e-61	229.00
IUUC-Dse-031297	Dothistroma septosporum	52.42	0.00e+00	1004.00
IUUC-Dme-031956	Drosophila melanogaster	32.15	1.00e-129	455.00
IUUC-Ete-032608	Echinops telfairi	35.39	3.00e-92	330.00
IUUC-Eca-034181	Equus caballus	38.49	3.00e-168	583.00
IUUC-Eeu-034495	Erinaceus europaeus	39.14	6.00e-167	579.00
IUUC-Fca-035994	Felis catus	39.62	2.00e-167	580.00
IUUC-Fal-036611	Ficedula albicollis	42.07	1.00e-129	455.00
IUUC-Fox-037807	Fusarium oxysporum	78.43	0.00e+00	1461.00
IUUC-Fso-038090	Fusarium solani	79.30	0.00e+00	1468.00
IUUC-Gmo-039018	Gadus morhua	34.38	3.00e-87	314.00
IUUC-Ggr-039748	Gaeumannomyces graminis	75.57	0.00e+00	1443.00
IUUC-Gga-040707	Gallus gallus	43.36	1.00e-131	462.00
IUUC-Gac-042334	Gasterosteus aculeatus	32.59	2.00e-76	278.00
IUUC-Gma-043033	Glycine max	35.69	5.00e-152	530.00
IUUC-Ggo-045334	Gorilla gorilla	38.29	4.00e-172	597.00
IUUC-Hsa-046996	Homo sapiens	38.12	2.00e-171	594.00
IUUC-Hvu-047381	Hordeum vulgare	33.12	2.00e-78	285.00
IUUC-Itr-047938	Ictidomys tridecemlineatus	38.08	6.00e-169	586.00
IUUC-Kpa-049185	Komagataella pastoris	41.70	0.00e+00	706.00
IUUC-Lch-050098	Latimeria chalumnae	34.67	9.00e-150	522.00
IUUC-Lpe-050710	Leersia perrieri	34.95	5.00e-147	513.00
IUUC-Loc-052745	Lepisosteus oculatus	36.79	4.00e-168	583.00
IUUC-Lma-053104	Leptosphaeria maculans	60.04	0.00e+00	1147.00
IUUC-Laf-054395	Loxodonta africana	37.98	1.00e-169	588.00
IUUC-Mcc-055077	Macaca mulatta	38.80	7.00e-173	599.00
IUUC-Meu-056418	Macropus eugenii	41.97	3.00e-93	335.00
IUUC-Mor-057031	Magnaporthe oryzae	73.53	0.00e+00	1292.00
IUUC-Mpo-057420	Magnaporthe poae	76.13	0.00e+00	1432.00
IUUC-Mtr-057838	Medicago truncatula	36.55	3.00e-160	557.00
IUUC-Mla-058854	Melampsora laricipopulina	41.91	0.00e+00	676.00
IUUC-Mga-060120	Meleagris gallopavo	40.30	1.00e-130	458.00
IUUC-Mvi-060407	Microbotryum violaceum	51.36	1.00e-170	591.00
IUUC-Mmr-060635	Microcebus murinus	37.95	2.00e-167	580.00
IUUC-Mdo-063023	Monodelphis domestica	37.91	4.00e-169	586.00
IUUC-Mmu-064103	Mus musculus	38.16	2.00e-173	601.00
IUUC-Mac-065569	Musa acuminata	36.64	7.00e-153	533.00
IUUC-Mpu-066462	Mustela putorius furo	38.60	3.00e-171	593.00
IUUC-Mlu-067894	Myotis lucifugus	38.80	1.00e-171	595.00
IUUC-Nfi-068321	Neosartorya fischeri	63.17	0.00e+00	1220.00
IUUC-Nle-069409	Nomascus leucogenys	38.39	3.00e-173	600.00
IUUC-Opr-070445	Ochotona princeps	42.86	2.00e-126	444.00
IUUC-Ont-072339	Oreochromis niloticus	37.71	7.00e-175	605.00
IUUC-Oan-073688	Ornithorhynchus anatinus	36.73	3.00e-154	537.00
IUUC-Ocu-074227	Oryctolagus cuniculus	38.18	2.00e-169	587.00
IUUC-Oba-075635	Oryza barthii	35.12	2.00e-141	494.00
IUUC-Obr-076897	Oryza brachyantha	35.64	3.00e-151	527.00
IUUC-Ogl-077555	Oryza glaberrima	35.02	7.00e-141	493.00
IUUC-Ogu-078724	Oryza glumaepatula	35.12	1.00e-142	498.00
IUUC-Oin-080030	Oryza indica	35.33	8.00e-142	496.00
IUUC-Olo-080687	Oryza longistaminata	33.37	1.00e-131	462.00
IUUC-Ome-081867	Oryza meridionalis	35.23	5.00e-142	496.00
IUUC-Oni-082559	Oryza nivara	35.33	7.00e-142	496.00
IUUC-Opu-083332	Oryza punctata	37.56	5.00e-133	466.00
IUUC-Oru-084455	Oryza rufipogon	35.23	2.00e-141	494.00
IUUC-Osa-085793	Oryza sativa	35.23	2.00e-141	494.00
IUUC-Ola-087395	Oryzias latipes	43.34	1.00e-123	436.00
IUUC-Olu-087768	Ostreococcus lucimarinus	35.86	5.00e-137	479.00
IUUC-Oga-088574	Otolemur garnettii	38.16	4.00e-168	583.00
IUUC-Oar-089453	Ovis aries	38.08	1.00e-172	598.00
IUUC-Ptr-090694	Pan troglodytes	38.39	2.00e-171	594.00
IUUC-Pan-092420	Papio anubis	38.60	8.00e-173	598.00
IUUC-Psi-093683	Pelodiscus sinensis	36.93	2.00e-163	567.00
IUUC-Pma-094197	Petromyzon marinus	33.33	8.00e-32	128.00
IUUC-Pno-094783	Phaeosphaeria nodorum	58.71	0.00e+00	1125.00
IUUC-Ppa-095208	Physcomitrella patens	35.88	1.00e-149	522.00
IUUC-Pfo-096299	Poecilia formosa	36.85	5.00e-175	606.00
IUUC-Pab-098706	Pongo abelii	38.53	3.00e-173	600.00
IUUC-Pop-099275	Populus trichocarpa	35.08	2.00e-147	514.00
IUUC-Pca-100796	Procavia capensis	30.80	6.00e-100	356.00
IUUC-Ppe-101861	Prunus persica	35.82	5.00e-149	520.00
IUUC-Pva-103241	Pteropus vampyrus	36.12	7.00e-152	529.00
IUUC-Pgr-103432	Puccinia graminis	40.06	0.00e+00	656.00
IUUC-Ptt-103742	Puccinia triticina	38.08	1.00e-170	592.00
IUUC-Pte-104069	Pyrenophora teres	60.06	0.00e+00	1116.00
IUUC-Pyt-104650	Pyrenophora triticirepentis	60.06	0.00e+00	1141.00
IUUC-Rno-105219	Rattus norvegicus	37.60	5.00e-168	583.00
IUUC-Sce-106271	Saccharomyces cerevisiae	42.66	0.00e+00	745.00
IUUC-Sha-107550	Sarcophilus harrisii	36.74	2.00e-166	577.00
IUUC-Sja-107664	Schizosaccharomyces japonicus	42.90	0.00e+00	759.00
IUUC-Spo-108239	Schizosaccharomyces pombe	43.11	0.00e+00	781.00
IUUC-Ssl-108626	Sclerotinia sclerotiorum	71.09	0.00e+00	1333.00
IUUC-Smo-109477	Selaginella moellendorffii	36.79	3.00e-151	527.00
IUUC-Sit-110000	Setaria italica	34.67	3.00e-136	477.00
IUUC-Sly-111595	Solanum lycopersicum	36.19	2.00e-151	528.00
IUUC-Stu-112516	Solanum tuberosum	36.33	1.00e-150	525.00
IUUC-Sar-113195	Sorex araneus	44.24	3.00e-118	417.00
IUUC-Sbi-114465	Sorghum bicolor	34.96	2.00e-148	518.00
IUUC-Sre-115006	Sporisorium reilianum	39.26	0.00e+00	677.00
IUUC-Ssc-115929	Sus scrofa	37.19	3.00e-166	577.00
IUUC-Tgu-117282	Taeniopygia guttata	36.29	6.00e-164	569.00
IUUC-Tru-118406	Takifugu rubripes	37.89	5.00e-172	596.00
IUUC-Tsy-119170	Tarsius syrichta	37.69	5.00e-166	576.00
IUUC-Tni-119721	Tetraodon nigroviridis	37.32	5.00e-165	573.00
IUUC-Tca-121761	Theobroma cacao	36.38	2.00e-159	554.00
IUUC-Tre-121908	Trichoderma reesei	78.33	0.00e+00	1411.00
IUUC-Tvi-122547	Trichoderma virens	77.88	0.00e+00	1427.00
IUUC-Tae-123224	Triticum aestivum	34.85	4.00e-142	497.00
IUUC-Tur-126811	Triticum urartu	36.48	3.00e-140	490.00
IUUC-Tme-126987	Tuber melanosporum	60.04	0.00e+00	1135.00
IUUC-Tbe-127315	Tupaia belangeri	45.32	6.00e-110	390.00
IUUC-Ttr-129165	Tursiops truncatus	33.13	2.00e-124	438.00
IUUC-Uma-129651	Ustilago maydis	39.58	0.00e+00	687.00
IUUC-Vda-129973	Verticillium dahliae	78.44	0.00e+00	1433.00
IUUC-Vpa-130163	Vicugna pacos	37.62	2.00e-49	189.00
IUUC-Vvi-131402	Vitis vinifera	35.32	6.00e-154	536.00
IUUC-Xtr-132296	Xenopus tropicalis	37.16	6.00e-168	582.00
IUUC-Xma-133028	Xiphophorus maculatus	37.24	4.00e-176	610.00
IUUC-Yli-134484	Yarrowia lipolytica	46.59	0.00e+00	770.00
IUUC-Zma-135938	Zea mays	35.02	4.00e-144	503.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence