iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSCJAG00000021063.2	ENSCJAT00000041464.2	ENSCJAP00000039248.2
ENSCJAG00000021063.2	ENSCJAT00000041446.2	ENSCJAP00000039231.2
ENSCJAG00000021063.2	ENSCJAT00000041447.2	ENSCJAP00000039232.2
ENSCJAG00000021063.2	ENSCJAT00000041452.2	ENSCJAP00000039237.2
ENSCJAG00000021063.2	ENSCJAT00000041450.2	ENSCJAP00000039235.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.50e-41	138.0	56	98
UBD/Beta-Prp	2.30e-43	149.4	634	886

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf.......sdtllvsGsdDgtikvWDlrtgvll 36
           gHt++v+c+++       ++t lvsG+ D+++  W++ ++ ll
   Q: 56   GHTSRVNCIQWickqdgsPSTELVSGGSDNQVIHWEIEDNQLL 98
           8*************99975599*************98887766 PP

UBD/Beta-Prp

   S: 13   itcvkfspdksllatgs.....rdgtikvwdvttgkllrslsgheaevtavkfspdgkilvtgseDrtikvw...dls........... 82
           i cv++ ++k+lla+++     + + i++w++t++k ++ l  h+ +vt++ fsp++k+l+ +s+Drt  +w   d             
   Q: 634  IFCVTCNNSKTLLASACkaakkEHAAIILWNTTSWKQVQNLVFHSLTVTQMAFSPNDKFLLAVSRDRTWSLWkkqDTIspefepvftlf 722
           66899999999999999332223567**********************************************77733367455555544 PP
   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwd..letgqclee..........tlsghdgvvncvvvhpdgnllvs.GslD 158
           +++  +t   h++ ++s+++sp+++++ +Gs+d+ + vw    +t+ c+e+          +    ++v  c ++hp+++++v+ G   
   Q: 723  AFTNKVTS-VHSRIIWSCDWSPDSKYFFTGSRDKKVVVWGecDSTDDCIEHnigpcssvldVGGAVTAVSICPELHPSQRYVVAvGLEC 810
           33333333.58899999**********************755689999999*******9888888999999********6665516666 PP
   S: 159  rtvrlWdl.......ktgkllrtl...........tgghtdsvyslsfdsng.............kelvsgsldgtvklwdlq 210
           +++ l+         +                   ++ ht ++++l ++  +              +++s+++d tvk++ + 
   Q: 811  GKICLYTWkktnqvpE-------IndwircvetsqSESHTLAIRKLCWKNCSgkaepkeaegakwLYFASCGEDHTVKIYRVN 886
           9*****9964544441.......224455556668556999999999888778889999999******************875 PP

Organism

Callithrix jacchus

Protein Sequence
(Fasta)

MVAPVLETSH VFCCPNRVRG VLNWSSGPRG LLAFGTSCSV VLYDPLKRVV VTNLNGHTSR 60
VNCIQWICKQ DGSPSTELVS GGSDNQVIHW EIEDNQLLKA VYLQGHEGPV YVVHAVYQRR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GCGCGTCTTT GTCTGTGCGG CCGACCAGCT AGCGACATGG TGGCACCCGT GCTGGAGACT 60
TCTCATGTGT TTTGCTGCCC AAACCGGGTG CGGGGAGTCC TGAACTGGAG CTCTGGGCCC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR011042--6-blade_b-propeller_TolB-like
IPR011047--Quinoprotein_ADH-like_supfam
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0005829--C:cytosol
GO:0033588--C:Elongator holoenzyme complex
GO:0000123--C:histone acetyltransferase complex
GO:0008023--C:transcription elongation factor complex
GO:0046425--P:regulation of JAK-STAT cascade

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000056	Aegilops tauschii	31.95	8.00e-110	391.00
IUUC-Aml-002049	Ailuropoda melanoleuca	85.79	0.00e+00	1309.00
IUUC-Atr-002456	Amborella trichopoda	32.46	3.00e-114	406.00
IUUC-Apl-004053	Anas platyrhynchos	55.95	0.00e+00	951.00
IUUC-Aca-004535	Anolis carolinensis	57.65	0.00e+00	1016.00
IUUC-Aly-005746	Arabidopsis lyrata	32.23	1.00e-107	384.00
IUUC-Ath-006664	Arabidopsis thaliana	35.72	2.00e-98	353.00
IUUC-Ago-007971	Ashbya gossypii	34.84	8.00e-88	318.00
IUUC-Acl-008173	Aspergillus clavatus	29.38	3.00e-96	346.00
IUUC-Afl-008665	Aspergillus flavus	25.26	2.00e-22	100.00
IUUC-Afu-008976	Aspergillus fumigatus	33.89	7.00e-91	328.00
IUUC-Ani-009284	Aspergillus nidulans	30.89	1.00e-93	338.00
IUUC-Ang-009809	Aspergillus niger	30.65	9.00e-87	314.00
IUUC-Aor-009959	Aspergillus oryzae	29.82	1.00e-83	304.00
IUUC-Ate-010442	Aspergillus terreus	29.24	8.00e-92	331.00
IUUC-Ame-011409	Astyanax mexicanus	47.15	0.00e+00	785.00
IUUC-Bgr-012137	Blumeria graminis	29.54	7.00e-90	325.00
IUUC-Bta-012892	Bos taurus	77.44	0.00e+00	1418.00
IUUC-Bci-013944	Botrytis cinerea	29.24	1.00e-84	307.00
IUUC-Bdi-014512	Brachypodium distachyon	33.11	4.00e-113	402.00
IUUC-Bol-015741	Brassica oleracea	36.57	1.00e-105	377.00
IUUC-Bra-017367	Brassica rapa	32.17	5.00e-111	395.00
IUUC-Cel-018712	Caenorhabditis elegans	35.21	2.00e-91	330.00
IUUC-Cfa-021006	Canis familiaris	80.76	0.00e+00	1449.00
IUUC-Cpo-021370	Cavia porcellus	76.77	0.00e+00	1381.00
IUUC-Csa-023845	Chlorocebus sabaeus	87.30	0.00e+00	1585.00
IUUC-Cho-024640	Choloepus hoffmanni	64.50	0.00e+00	685.00
IUUC-Cin-025772	Ciona intestinalis	37.74	9.00e-146	510.00
IUUC-Csv-025891	Ciona savignyi	37.39	3.00e-151	528.00
IUUC-Cgl-026443	Colletotrichum gloeosporioides	28.54	4.00e-92	332.00
IUUC-Cne-027081	Cryptococcus neoformans	31.76	2.00e-88	320.00
IUUC-Cme-027225	Cyanidioschyzon merolae	27.26	6.00e-48	186.00
IUUC-Dre-028250	Danio rerio	57.00	0.00e+00	786.00
IUUC-Dno-028847	Dasypus novemcinctus	73.04	0.00e+00	1318.00
IUUC-Dor-030351	Dipodomys ordii	88.66	0.00e+00	1166.00
IUUC-Dse-031317	Dothistroma septosporum	32.07	5.00e-89	322.00
IUUC-Dme-032019	Drosophila melanogaster	38.25	2.00e-171	595.00
IUUC-Ete-033194	Echinops telfairi	85.44	8.00e-167	580.00
IUUC-Eca-033779	Equus caballus	80.00	0.00e+00	1452.00
IUUC-Eeu-034790	Erinaceus europaeus	75.08	0.00e+00	938.00
IUUC-Fca-036090	Felis catus	77.56	0.00e+00	1304.00
IUUC-Fal-037663	Ficedula albicollis	62.53	0.00e+00	1067.00
IUUC-Fox-037828	Fusarium oxysporum	29.25	3.00e-97	349.00
IUUC-Fso-038462	Fusarium solani	34.06	2.00e-88	320.00
IUUC-Gmo-039450	Gadus morhua	47.60	0.00e+00	821.00
IUUC-Ggr-040023	Gaeumannomyces graminis	30.69	1.00e-72	268.00
IUUC-Gga-040480	Gallus gallus	56.00	0.00e+00	986.00
IUUC-Gac-041544	Gasterosteus aculeatus	48.10	0.00e+00	838.00
IUUC-Gma-044048	Glycine max	32.37	3.00e-115	409.00
IUUC-Ggo-045381	Gorilla gorilla	80.82	0.00e+00	1459.00
IUUC-Hsa-046096	Homo sapiens	94.73	0.00e+00	1760.00
IUUC-Hvu-047494	Hordeum vulgare	32.39	5.00e-117	415.00
IUUC-Itr-048823	Ictidomys tridecemlineatus	79.13	0.00e+00	1344.00
IUUC-Kpa-049241	Komagataella pastoris	33.89	1.00e-90	327.00
IUUC-Lch-050512	Latimeria chalumnae	58.91	0.00e+00	1046.00
IUUC-Lpe-051448	Leersia perrieri	31.94	2.00e-113	403.00
IUUC-Loc-051882	Lepisosteus oculatus	51.79	0.00e+00	895.00
IUUC-Lma-053023	Leptosphaeria maculans	31.47	6.00e-93	335.00
IUUC-Laf-054519	Loxodonta africana	77.87	0.00e+00	1422.00
IUUC-Mcc-055580	Macaca mulatta	93.04	0.00e+00	1714.00
IUUC-Meu-056606	Macropus eugenii	68.44	4.00e-109	389.00
IUUC-Mor-057109	Magnaporthe oryzae	30.08	2.00e-94	340.00
IUUC-Mpo-057297	Magnaporthe poae	30.06	7.00e-78	285.00
IUUC-Mtr-058348	Medicago truncatula	32.65	5.00e-116	412.00
IUUC-Mla-059159	Melampsora laricipopulina	28.57	4.00e-79	289.00
IUUC-Mga-059778	Meleagris gallopavo	56.63	0.00e+00	709.00
IUUC-Mvi-060447	Microbotryum violaceum	30.76	3.00e-100	359.00
IUUC-Mmr-061139	Microcebus murinus	89.35	0.00e+00	1665.00
IUUC-Mdo-061866	Monodelphis domestica	60.78	0.00e+00	1080.00
IUUC-Mmu-063390	Mus musculus	62.47	0.00e+00	1071.00
IUUC-Mac-064693	Musa acuminata	32.57	4.00e-119	422.00
IUUC-Mpu-066547	Mustela putorius furo	80.11	0.00e+00	1430.00
IUUC-Mlu-067156	Myotis lucifugus	80.45	0.00e+00	1484.00
IUUC-Nfi-068616	Neosartorya fischeri	30.80	1.00e-91	330.00
IUUC-Ncr-068915	Neurospora crassa	27.53	5.00e-85	309.00
IUUC-Nle-069958	Nomascus leucogenys	84.78	0.00e+00	1525.00
IUUC-Opr-071093	Ochotona princeps	60.43	0.00e+00	686.00
IUUC-Ont-072178	Oreochromis niloticus	50.28	0.00e+00	860.00
IUUC-Oan-073667	Ornithorhynchus anatinus	59.60	0.00e+00	1043.00
IUUC-Ocu-074662	Oryctolagus cuniculus	80.00	0.00e+00	1447.00
IUUC-Oba-075577	Oryza barthii	33.26	7.00e-121	428.00
IUUC-Obr-076566	Oryza brachyantha	32.39	4.00e-118	419.00
IUUC-Ogl-077054	Oryza glaberrima	33.26	5.00e-121	428.00
IUUC-Ogu-078846	Oryza glumaepatula	33.26	2.00e-120	426.00
IUUC-Oin-079084	Oryza indica	33.00	3.00e-118	419.00
IUUC-Olo-080933	Oryza longistaminata	30.52	2.00e-96	347.00
IUUC-Ome-081500	Oryza meridionalis	31.58	3.00e-101	362.00
IUUC-Oni-082352	Oryza nivara	33.30	1.00e-118	421.00
IUUC-Opu-084116	Oryza punctata	36.31	3.00e-110	392.00
IUUC-Oru-085249	Oryza rufipogon	33.00	3.00e-118	419.00
IUUC-Osa-086270	Oryza sativa	33.00	3.00e-118	419.00
IUUC-Ola-086625	Oryzias latipes	44.53	0.00e+00	727.00
IUUC-Olu-087638	Ostreococcus lucimarinus	32.50	8.00e-83	301.00
IUUC-Oga-088634	Otolemur garnettii	82.92	0.00e+00	1519.00
IUUC-Oar-089475	Ovis aries	77.45	0.00e+00	1389.00
IUUC-Ptr-091131	Pan troglodytes	87.42	0.00e+00	1591.00
IUUC-Pan-092869	Papio anubis	86.91	0.00e+00	1577.00
IUUC-Psi-093146	Pelodiscus sinensis	70.43	0.00e+00	993.00
IUUC-Pma-094479	Petromyzon marinus	49.72	0.00e+00	825.00
IUUC-Pno-095061	Phaeosphaeria nodorum	30.11	4.00e-65	242.00
IUUC-Ppa-095618	Physcomitrella patens	37.46	2.00e-116	414.00
IUUC-Pfo-096816	Poecilia formosa	48.97	0.00e+00	826.00
IUUC-Pab-097548	Pongo abelii	87.19	0.00e+00	1585.00
IUUC-Pop-099643	Populus trichocarpa	33.01	2.00e-123	436.00
IUUC-Pca-100983	Procavia capensis	61.01	0.00e+00	1018.00
IUUC-Ppe-101301	Prunus persica	31.91	2.00e-112	400.00
IUUC-Pva-102460	Pteropus vampyrus	81.69	0.00e+00	1486.00
IUUC-Pgr-103507	Puccinia graminis	28.35	3.00e-73	270.00
IUUC-Ptt-103892	Puccinia triticina	28.00	2.00e-63	237.00
IUUC-Pte-104283	Pyrenophora teres	31.89	6.00e-94	338.00
IUUC-Pyt-104465	Pyrenophora triticirepentis	30.35	6.00e-91	328.00
IUUC-Rno-105842	Rattus norvegicus	65.36	0.00e+00	1117.00
IUUC-Sce-106459	Saccharomyces cerevisiae	29.23	2.00e-92	333.00
IUUC-Sha-106586	Sarcophilus harrisii	57.21	0.00e+00	997.00
IUUC-Sja-107868	Schizosaccharomyces japonicus	34.11	1.00e-80	294.00
IUUC-Spo-108302	Schizosaccharomyces pombe	34.54	3.00e-83	303.00
IUUC-Smo-108861	Selaginella moellendorffii	38.93	4.00e-121	429.00
IUUC-Sit-109915	Setaria italica	32.54	3.00e-118	419.00
IUUC-Sly-111714	Solanum lycopersicum	32.42	8.00e-119	421.00
IUUC-Stu-112631	Solanum tuberosum	32.13	3.00e-118	419.00
IUUC-Sar-113200	Sorex araneus	65.96	0.00e+00	1143.00
IUUC-Sbi-114582	Sorghum bicolor	33.19	1.00e-121	431.00
IUUC-Sre-115001	Sporisorium reilianum	29.75	2.00e-43	171.00
IUUC-Ssc-115519	Sus scrofa	88.80	0.00e+00	1229.00
IUUC-Tgu-116987	Taeniopygia guttata	55.60	0.00e+00	958.00
IUUC-Tru-118476	Takifugu rubripes	56.79	0.00e+00	769.00
IUUC-Tsy-119230	Tarsius syrichta	71.43	3.00e-169	589.00
IUUC-Tni-120448	Tetraodon nigroviridis	32.38	2.00e-113	403.00
IUUC-Tca-121650	Theobroma cacao	31.65	5.00e-112	398.00
IUUC-Tre-122086	Trichoderma reesei	33.33	1.00e-79	291.00
IUUC-Tvi-122397	Trichoderma virens	33.16	2.00e-76	280.00
IUUC-Tae-125778	Triticum aestivum	32.42	9.00e-117	414.00
IUUC-Tur-126578	Triticum urartu	32.74	4.00e-116	412.00
IUUC-Tme-126927	Tuber melanosporum	31.72	1.00e-87	317.00
IUUC-Tbe-127922	Tupaia belangeri	72.87	2.00e-131	463.00
IUUC-Ttr-128918	Tursiops truncatus	81.69	0.00e+00	1502.00
IUUC-Uma-129474	Ustilago maydis	27.68	2.00e-40	161.00
IUUC-Vda-129944	Verticillium dahliae	28.49	2.00e-79	290.00
IUUC-Vpa-130693	Vicugna pacos	84.20	0.00e+00	1157.00
IUUC-Vvi-130949	Vitis vinifera	31.78	3.00e-113	402.00
IUUC-Xtr-132639	Xenopus tropicalis	57.52	0.00e+00	1030.00
IUUC-Xma-134223	Xiphophorus maculatus	58.87	0.00e+00	629.00
IUUC-Yli-134601	Yarrowia lipolytica	36.12	1.00e-102	367.00
IUUC-Zma-135952	Zea mays	33.80	1.00e-121	430.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence