iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099303

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Zinc finger family protein

Genbank Nucleotide ID

CM000345

Gene Name

POPTRDRAFT_558319; POPTR_0009s01110g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0009s01110	POPTR_0009s01110.1	POPTR_0009s01110.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.70e-07	32.1	167	209

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlC 45
           C++C+e +   ++   vlpCgH++h++Cl+ +     ++  + +CP+C
   Q: 167  CPVCFEFLfdtMRDITVLPCGHTIHLECLKEM-----EQHYRYSCPVC 209
           ******99455333669************777.....4666999**** PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MGSESVAQSD FLEFGDTEAS LMEIGSGNYG CSHYRRRCKI RAPCCNEIFD CRHCHNDAKN 60
GLETNPLDRH DIPRHEVTKV ICSLCDTEQD VKQNCINCGV CMGKYYCSKC KFFDDDVSKN 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGCCCACAG CTCATGCCTA CTACTCAGTG ATTGGACTCA AACTCACTCA CAGCTGTATA 60
GAATCAGACA GTCTTGAGAA ATAAAAACCT CCCATATCCA ACATCCATGC ATTAAGTATA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004039--Rubredoxin-type_fold
IPR027370--Znf-RING_LisH
IPR008913--Znf_CHY
IPR017921--Znf_CTCHY
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS51266--ZF_CHY
PS51270--ZF_CTCHY
PS50089--ZF_RING_2

Pfam

PF05495--zf-CHY
PF13445--zf-RING_UBOX

SMART

SM00184--RING

Gene Ontology

GO:0008270--F:zinc ion binding
GO:1902456--P:regulation of stomatal opening

KEGG

pop:POPTR_0009s01110g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aly-006141	Arabidopsis lyrata	75.28	1.00e-122	431.00
IUUC-Ath-007628	Arabidopsis thaliana	76.03	5.00e-124	436.00
IUUC-Bdi-014852	Brachypodium distachyon	70.82	1.00e-113	402.00
IUUC-Bol-016321	Brassica oleracea	70.49	1.00e-124	438.00
IUUC-Bra-018009	Brassica rapa	74.07	1.00e-123	435.00
IUUC-Cpo-022137	Cavia porcellus	50.00	3.00e-38	150.00
IUUC-Cre-022565	Chlamydomonas reinhardtii	52.99	1.00e-78	285.00
IUUC-Dor-030930	Dipodomys ordii	39.53	5.00e-41	160.00
IUUC-Dse-031251	Dothistroma septosporum	39.50	9.00e-54	204.00
IUUC-Ete-032847	Echinops telfairi	55.32	1.00e-25	109.00
IUUC-Gma-043022	Glycine max	73.08	2.00e-130	457.00
IUUC-Hvu-047256	Hordeum vulgare	71.32	1.00e-117	414.00
IUUC-Lpe-051493	Leersia perrieri	69.77	2.00e-114	404.00
IUUC-Meu-056901	Macropus eugenii	47.41	4.00e-52	196.00
IUUC-Mtr-058596	Medicago truncatula	74.91	8.00e-125	439.00
IUUC-Mmu-063959	Mus musculus	44.79	3.00e-58	218.00
IUUC-Opr-070267	Ochotona princeps	46.12	2.00e-62	231.00
IUUC-Oba-075821	Oryza barthii	62.00	5.00e-112	397.00
IUUC-Ogl-077866	Oryza glaberrima	69.43	3.00e-110	390.00
IUUC-Ogu-078001	Oryza glumaepatula	62.00	5.00e-112	397.00
IUUC-Oin-079627	Oryza indica	63.79	5.00e-114	404.00
IUUC-Olo-080982	Oryza longistaminata	68.72	1.00e-97	348.00
IUUC-Oni-082329	Oryza nivara	62.63	1.00e-113	402.00
IUUC-Oru-085088	Oryza rufipogon	62.63	1.00e-113	402.00
IUUC-Oga-089082	Otolemur garnettii	44.40	7.00e-60	223.00
IUUC-Ppa-095679	Physcomitrella patens	62.92	1.00e-104	372.00
IUUC-Ppe-101606	Prunus persica	74.83	3.00e-132	463.00
IUUC-Smo-108713	Selaginella moellendorffii	70.85	1.00e-108	385.00
IUUC-Sit-110156	Setaria italica	69.38	2.00e-112	397.00
IUUC-Stu-111990	Solanum tuberosum	72.89	2.00e-125	441.00
IUUC-Sar-113709	Sorex araneus	46.12	8.00e-64	236.00
IUUC-Sbi-113777	Sorghum bicolor	68.99	3.00e-113	400.00
IUUC-Tca-121698	Theobroma cacao	81.53	2.00e-143	500.00
IUUC-Tae-124038	Triticum aestivum	71.70	3.00e-118	416.00
IUUC-Tbe-127598	Tupaia belangeri	59.15	3.00e-20	91.30
IUUC-Vvi-131152	Vitis vinifera	78.47	4.00e-138	483.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence