iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Sly-111859

Ensembl Protein ID

Solyc01g060050.1.1

UniProt Accession

K4AWB0; K4AWB0_SOLLC

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Solyc01g060050.1	Solyc01g060050.1.1	Solyc01g060050.1.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	4.20e-32	109.5	298	331
UBD/Beta-Prp	1.70e-44	153.0	205	333

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 1    gHtdsvtclaf....sd.tllvsGsdDgtikvWD 29
           gH++ vt++af    s+   l+s+sdDgt+++WD
   Q: 298  GHSGAVTAIAFsprpSSiYQLLSSSDDGTCRIWD 331
           8***********99766899************** PP

UBD/Beta-Prp

   S: 83   tgkcvhtlkghedsvlslsfspsgdklvsGshdrtirvwdletgqcleetlsghdgvvncvvvhpdgnllvsGslDrtvrlWdlktgkllr 173
           + + + +++gh + v++  f++sg ++++Gs+dr +++w +et +cl    +gh+g ++ ++v++++ l++s+s+D +vr+W+l+ g  + 
   Q: 205  KMQNIKKVRGHRNAVYCAIFDRSGRYVITGSDDRLVKIWSMETAYCLA-SCRGHEGDITDLAVNSNNTLVASASNDCIVRVWRLPDGLPIS 294
           56678899***************************************9.9***************************************** PP
   S: 174  tltgghtdsvyslsfdsng...kelvsgsldgtvklwdlq 210
            l+g h ++v+ ++f++      +l+s s+dgt ++wd +
   Q: 295  VLRG-HSGAVTAIAFSPRPssiYQLLSSSDDGTCRIWDAR 333
           ***9.***********9889999***************98 PP

Organism

Solanum lycopersicum

Protein Sequence
(Fasta)

MANQNSQPSD PQRSTEADVD IDMGEVYFLI MHFLSAGPCH RTYGQFWNEL LEHQLLPRRY 60
HAWYSRSGAP SGDENDDGRS FPLSYNRLVE RYSHVGKDHL VKLFKQLLLS VKAPPLGMVG 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGGCTAATC AAAATTCTCA GCCATCTGAT CCACAAAGAT CAACAGAGGC TGATGTGGAC 60
ATCGACATGG GTGAGGTTTA TTTTTTGATT ATGCATTTCC TATCAGCTGG GCCATGTCAC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Cre-023003	Chlamydomonas reinhardtii	31.39	1.00e-30	127.00
IUUC-Dor-031052	Dipodomys ordii	29.98	1.00e-41	165.00
IUUC-Ete-032717	Echinops telfairi	33.96	5.00e-38	154.00
IUUC-Eeu-034871	Erinaceus europaeus	29.78	3.00e-43	170.00
IUUC-Hvu-047706	Hordeum vulgare	75.49	6.00e-140	489.00
IUUC-Meu-056321	Macropus eugenii	29.58	4.00e-53	203.00
IUUC-Sar-113004	Sorex araneus	29.70	4.00e-64	240.00
IUUC-Sbi-114195	Sorghum bicolor	73.70	0.00e+00	823.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence