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Basic Information Integrated Annotations

Tag Content
UUCD2 ID IUUC-Ath-006657
UUCD1 version UUC-ArT-00219
Ensembl Protein ID AT4G18900.1
UniProt Accession F4JSB9; F4JSB9_ARATH
Genbank Protein ID AEE84103.1
Protein Name Transducin/WD40 repeat-like superfamily protein
Genbank Nucleotide ID CP002687
Gene Name At4g18900; F13C5.70; F13C5_70
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT4G18900 AT4G18900.1 AT4G18900.1
Annotation
Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEOArrayExpress
DNA & RNA Element
TRANSFAC
Protein Expression/Proteomics
GPMDB
Status Unreviewed
Classification
Family E-Value Score Start End
E3 adaptor/Cullin RING/DCX/DWD 5.80e-27 93.5 232 269
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf....sdtllvsGsdDgtikvWDlrtgvll 36
    Ht sv +la+ ++l+s+s D+++kvWD+ tg++
   Q: 232 HTRSVLGLAWnkefR-NILASASADKKVKVWDVATGTCK 269
    9*********95543.89******************996 PP
   

Organism Arabidopsis thaliana
Protein Sequence
(Fasta)
MRADELPSKE EIEMHKDSCK YFSNDTEEEE TEDEEENGEV AHAKAVAEEF GKSSKSKNVS 60
SSMELDDEVA EGLKELDMDN YDEEDDGIEI FSSGRGDLYY KSNEMDPYLK RNDDHDDDSD 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Ath-006657|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGCGTGCTG ATGAACTTCC TTCTAAGGAG GAAATCGAAA TGCACAAAGA CAGTTGTAAA 60
TATTTCAGTA ATGATACAGA AGAAGAAGAG ACCGAGGATG AAGAAGAGAA TGGTGAAGTT 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Ath-006657|E3,WD_repeat|Arabidopsis thaliana
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR020472--G-protein_beta_WD-40_rep
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR019775--WD40_repeat_CS
IPR017986--WD40_repeat_dom

PROSITE

PS00678--WD_REPEATS_1
PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

PRINTS

PR00320--GPROTEINBRPT

SMART

SM00320--WD40

Gene Ontology

GO:0005634--C:nucleus

KEGG ath:AT4G18900
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Aca-005184 Anolis carolinensis 34.58 8.00e-55 207.00
IUUC-Bol-015319 Brassica oleracea 72.49 1.00e-175 608.00
IUUC-Bra-017412 Brassica rapa 72.27 7.00e-176 609.00
IUUC-Ete-032857 Echinops telfairi 35.71 1.00e-41 163.00
IUUC-Hvu-047774 Hordeum vulgare 58.33 1.00e-74 271.00
IUUC-Ogl-076951 Oryza glaberrima 33.77 2.00e-27 117.00
IUUC-Pma-094478 Petromyzon marinus 36.11 8.00e-48 183.00
IUUC-Pab-097912 Pongo abelii 33.49 1.00e-32 132.00
IUUC-Ptt-103725 Puccinia triticina 31.58 2.00e-25 109.00
Created Date 25-Jun-2017

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