iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Rno-136666

Ensembl Protein ID

ENSRNOP00000015469.6

UniProt Accession

D3ZJJ0; D3ZJJ0_RAT

Genbank Protein ID

AC128116

Protein Name

Family with sequence similarity 188, member B

Genbank Nucleotide ID

ENSRNOP00000015469

Gene Name

Fam188b

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSRNOG00000011530.8	ENSRNOT00000015469.8	ENSRNOP00000015469.6

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
DNA & RNA Element
RAID2
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/MIU	74.05	0.00e+00	1049.00	IUUC-Hsa-136748
DUB/MINDY	74.05	0.00e+00	1049.00	IUUC-Hsa-136748

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Rattus norvegicus

Protein Sequence
(Fasta)

MDSLYVEEVA ASLVREFLSR KGLNKTFMTM DQERPRCELS INSRNDLRRV LHLEFLYKEN 60
KTKEKPLKTN LELITRYFLD HFGNTDSTES QEAPIPAIPI PKKNSKLPLR YPEATLVNIY 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AACCATGGGG TAGGGCGTGT TTCCCATTTT ATGTATGGAG AAATGGAACC TTTGACTGGG 60
TCAGTGACAT CCACCACAAG AAGCCAGAGT CAGTCAATTC GGCGCCCAGA ACTCATAGGC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR025257--DUF4205

Pfam

PF13898--DUF4205

SMART

SM01174--DUF4205

KEGG

rno:312365

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-136380	Ailuropoda melanoleuca	73.43	0.00e+00	1115.00
IUUC-Apl-136386	Anas platyrhynchos	52.10	4.00e-176	611.00
IUUC-Aca-136390	Anolis carolinensis	69.95	1.00e-146	513.00
IUUC-Ame-136408	Astyanax mexicanus	43.72	3.00e-150	525.00
IUUC-Bta-136412	Bos taurus	71.99	0.00e+00	993.00
IUUC-Cja-136425	Callithrix jacchus	66.38	0.00e+00	717.00
IUUC-Cfa-136429	Canis familiaris	72.38	0.00e+00	1088.00
IUUC-Cpo-136433	Cavia porcellus	71.02	0.00e+00	1037.00
IUUC-Cre-136436	Chlamydomonas reinhardtii	45.88	3.00e-43	167.00
IUUC-Csa-136439	Chlorocebus sabaeus	74.05	0.00e+00	1056.00
IUUC-Cho-136443	Choloepus hoffmanni	35.92	1.00e-46	180.00
IUUC-Dre-136453	Danio rerio	42.08	3.00e-151	528.00
IUUC-Dno-136457	Dasypus novemcinctus	83.68	0.00e+00	649.00
IUUC-Dor-136462	Dipodomys ordii	70.01	0.00e+00	1003.00
IUUC-Dme-136465	Drosophila melanogaster	31.71	3.00e-30	126.00
IUUC-Ete-136468	Echinops telfairi	61.79	7.00e-85	308.00
IUUC-Eca-136472	Equus caballus	74.08	0.00e+00	1068.00
IUUC-Fca-136478	Felis catus	73.11	0.00e+00	1020.00
IUUC-Fal-136482	Ficedula albicollis	50.13	0.00e+00	668.00
IUUC-Gmo-136487	Gadus morhua	55.59	2.00e-107	383.00
IUUC-Gga-136492	Gallus gallus	50.76	0.00e+00	695.00
IUUC-Gac-136496	Gasterosteus aculeatus	59.22	1.00e-125	443.00
IUUC-Gma-136501	Glycine max	33.03	2.00e-41	164.00
IUUC-Ggo-136503	Gorilla gorilla	74.21	0.00e+00	1051.00
IUUC-Hsa-136748	Homo sapiens	74.05	0.00e+00	1099.00
IUUC-Itr-136511	Ictidomys tridecemlineatus	91.19	4.00e-86	309.00
IUUC-Lch-136514	Latimeria chalumnae	75.88	3.00e-91	327.00
IUUC-Loc-136522	Lepisosteus oculatus	47.85	0.00e+00	655.00
IUUC-Laf-136526	Loxodonta africana	35.75	1.00e-54	206.00
IUUC-Mcc-136531	Macaca mulatta	74.44	0.00e+00	1053.00
IUUC-Meu-136535	Macropus eugenii	69.82	1.00e-137	483.00
IUUC-Mtr-136540	Medicago truncatula	34.15	2.00e-42	167.00
IUUC-Mga-136544	Meleagris gallopavo	70.68	2.00e-141	496.00
IUUC-Mmr-136548	Microcebus murinus	74.08	0.00e+00	1093.00
IUUC-Mdo-136552	Monodelphis domestica	53.39	0.00e+00	719.00
IUUC-Mmu-136556	Mus musculus	91.14	0.00e+00	1306.00
IUUC-Mac-136559	Musa acuminata	33.43	2.00e-39	157.00
IUUC-Mpu-136562	Mustela putorius furo	73.30	0.00e+00	1077.00
IUUC-Mlu-136566	Myotis lucifugus	69.55	0.00e+00	975.00
IUUC-Nle-136573	Nomascus leucogenys	73.54	0.00e+00	1064.00
IUUC-Opr-136577	Ochotona princeps	65.73	0.00e+00	708.00
IUUC-Ont-136580	Oreochromis niloticus	60.11	4.00e-127	448.00
IUUC-Oan-136583	Ornithorhynchus anatinus	66.84	2.00e-147	515.00
IUUC-Ocu-136586	Oryctolagus cuniculus	70.03	0.00e+00	1008.00
IUUC-Oga-136615	Otolemur garnettii	73.43	0.00e+00	1083.00
IUUC-Oar-136620	Ovis aries	35.83	1.00e-56	213.00
IUUC-Ptr-136624	Pan troglodytes	74.05	0.00e+00	1086.00
IUUC-Pan-136628	Papio anubis	74.44	0.00e+00	1054.00
IUUC-Psi-136632	Pelodiscus sinensis	64.34	2.00e-166	579.00
IUUC-Ppa-136638	Physcomitrella patens	36.09	8.00e-42	165.00
IUUC-Pfo-136642	Poecilia formosa	53.48	3.00e-122	432.00
IUUC-Pab-136646	Pongo abelii	73.79	0.00e+00	1074.00
IUUC-Pca-136653	Procavia capensis	59.75	3.00e-148	519.00
IUUC-Pva-136660	Pteropus vampyrus	68.93	0.00e+00	994.00
IUUC-Sha-136672	Sarcophilus harrisii	47.02	3.00e-126	445.00
IUUC-Sar-136686	Sorex araneus	58.76	0.00e+00	823.00
IUUC-Ssc-136692	Sus scrofa	57.57	0.00e+00	656.00
IUUC-Tgu-136695	Taeniopygia guttata	70.26	1.00e-163	569.00
IUUC-Tru-136699	Takifugu rubripes	46.85	5.00e-128	451.00
IUUC-Tsy-136702	Tarsius syrichta	53.48	3.00e-179	622.00
IUUC-Tni-136707	Tetraodon nigroviridis	51.95	1.00e-111	397.00
IUUC-Tbe-136720	Tupaia belangeri	67.18	8.00e-121	427.00
IUUC-Ttr-136723	Tursiops truncatus	69.72	0.00e+00	911.00
IUUC-Vpa-136730	Vicugna pacos	59.27	1.00e-117	417.00
IUUC-Xtr-136735	Xenopus tropicalis	64.02	8.00e-139	487.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence