iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Pop-099407

UUCD1 version

Ensembl Protein ID

UniProt Accession

Genbank Protein ID

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000348

Gene Name

POPTRDRAFT_570596; POPTR_0012s14640g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0012s14640	POPTR_0012s14640.1	POPTR_0012s14640.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.10e-06	29.2	197	238

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf...kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C++C+e f    d  + lpC+H++h dC+  w       + + +CP+Cr
   Q: 197  CPVCKEIFevgGD-AMELPCKHLYHSDCVVPW------LNLHNTCPVCR 238
           ********77755.677***************......**********8 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLINRPRVT VNGIRRMRTF HFFWCQNCQS ISRFTSINRL EIFCPNCYSG MNHELDVSRP 60
RFFADITGLE SSPGARFLVS LAQMLDPPTR GQDADSGRRI RWVLGSANGP WITLQFVEPP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCGTTGA TCAATCGCCC TCGTGTTACA GTCAATGGAA TCAGAAGAAT GAGAACTTTT 60
CATTTCTTCT GGTGTCAAAA TTGCCAAAGT ATTTCAAGGT TCACCTCCAT AAACCGGCTA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD

PROSITE

PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00184--RING

Gene Ontology

GO:0061630--F:ubiquitin protein ligase activity
GO:0008270--F:zinc ion binding
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0000209--P:protein polyubiquitination
GO:0042787--P:protein ubiquitination involved in ubiquitin-dependent protein catabolic process

KEGG

pop:POPTR_0012s14640g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ete-032392	Echinops telfairi	44.21	3.00e-21	95.10
IUUC-Mtr-057829	Medicago truncatula	43.73	1.00e-62	232.00
IUUC-Sly-111898	Solanum lycopersicum	40.74	2.00e-58	218.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence