iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO
DNA & RNA Element
microRNA
Protein-protein Interaction
PINA	Mentha
Protein Expression/Proteomics

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/RING	2.60e-06	28.2	6	51

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/RING

   S: 1    CaiCledf.....kdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iC edf     ++ p++l+CgH++++ C +k+     +++  ++CP Cr
   Q: 6    CEICNEDFssatdENIPRILRCGHTICHGCAEKL-----LQNSMILCPFCR 51
           99******88876555**************9888.....688889*****8 PP

Organism

Caenorhabditis elegans

Protein Sequence
(Fasta)

MSFIECEICN EDFSSATDEN IPRILRCGHT ICHGCAEKLL QNSMILCPFC REATNVSTVK 60
DLQKNFALLQ AVEHAKTRTE EKDPIDSPPK CASHQYNFAE FVCIEPTCSS SDKLMCRTCE 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGTCATTTA TTGAGTGTGA AATTTGCAAC GAAGATTTCT CAAGTGCCAC CGATGAAAAT 60
ATTCCTAGGA TTTTGAGTAA GCTTTTGCTA CCTTTCCTAA AATTAAAAAA TAAAAATTCA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR000315--Znf_B-box
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF13639--zf-RING_2

SMART

SM00336--BBOX
SM00184--RING

Gene Ontology

GO:0005622--C:intracellular
GO:0008270--F:zinc ion binding

KEGG

cel:CELE_F43C11.8

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Atr-002488	Amborella trichopoda	34.88	5.00e-08	50.10
IUUC-Aly-006116	Arabidopsis lyrata	35.23	5.00e-08	50.10
IUUC-Cho-024696	Choloepus hoffmanni	41.33	1.00e-11	63.50
IUUC-Ete-032250	Echinops telfairi	40.54	1.00e-11	63.50
IUUC-Mga-059343	Meleagris gallopavo	43.84	8.00e-12	64.30
IUUC-Obr-076124	Oryza brachyantha	33.72	9.00e-07	45.80
IUUC-Pva-103234	Pteropus vampyrus	26.82	1.00e-11	63.50

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence