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Tag Content
UUCD2 ID IUUC-Aly-006065
UUCD1 version UUC-ArL-00697
Ensembl Protein ID scaffold_102156.1
UniProt Accession D7KHC3; D7KHC3_ARALL
Genbank Protein ID EFH69300.1
Protein Name Zinc finger family protein
Genbank Nucleotide ID GL348713
Gene Name ARALYDRAFT_889362
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
scaffold_102156.1 scaffold_102156.1 scaffold_102156.1
Status Unreviewed
Classification
Family E-Value Score Start End
E3 activity/RING/U-box 8.70e-07 29.6 20 75
E3 activity/RING/RING 8.10e-08 33.4 23 64
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   E3 activity/RING/U-box
   S: 5    eflCpIslelMrdPvvlpsGitydrssIekwl..asggktcPvtrqplteedlvPn 58
            f C I l+l +dP v+ +G+ +   ++ kwl   s+ k+cPv+++ ++e+ lvP 
   Q: 20   NFECNICLDLAQDPIVTLCGHLFCWPCLYKWLhlHSQSKECPVCKAVIEEDRLVPL 75
           79******************************87777779**************96 PP
   

   E3 activity/RING/RING
   S: 1    CaiCledfkdgplvlpCgHvfhadClqkwpglknssskefrCPlCr 46
           C iCl+  +d p+v+ CgH+f+  Cl+kw    ++ s++  CP+C+
   Q: 23   CNICLDLAQD-PIVTLCGHLFCWPCLYKW---LHLHSQSKECPVCK 64
           99********.999***************...444788889****7 PP
   
Organism Arabidopsis lyrata
Protein Sequence
(Fasta)
MSDVPSCSSG NDTNSNDSSN FECNICLDLA QDPIVTLCGH LFCWPCLYKW LHLHSQSKEC 60
PVCKAVIEED RLVPLYGRGK SSADPRSKSI PGLEVPNRPS GQRPETAQPP DPNHGFAHHH 120
It may take some time, please wait.

Protein Fasta Sequence


>IUUC-Aly-006065|E3,U-box;E3,RING|Arabidopsis lyrata
Please wait for a moment...
Nucleotide Sequence
(Fasta)
TCAGAGGTTT TTGGGTGAAT CATGTCTGAT GTTCCTTCTT GTTCTAGCGG CAATGATACA 60
AACAGCAATG ATTCGAGTAA CTTTGAATGT AACATCTGCT TAGACTTGGC TCAAGATCCT 120
It may take some time, please wait.

Nucleotide Fasta Sequence


>IUUC-Aly-006065|E3,U-box;E3,RING|Arabidopsis lyrata
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
Interpro

IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS
PROSITE

PS00518--ZF_RING_1
PS50089--ZF_RING_2
SMART

SM00184--RING
Gene Ontology

GO:0008270--F:zinc ion binding
KEGG aly:ARALYDRAFT_889362
Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-001042 Aegilops tauschii 59.86 7.00e-41 159.00
IUUC-Aml-001875 Ailuropoda melanoleuca 58.33 2.00e-23 100.00
IUUC-Atr-002444 Amborella trichopoda 64.04 1.00e-54 205.00
IUUC-Apl-003744 Anas platyrhynchos 57.75 4.00e-23 99.00
IUUC-Aca-004254 Anolis carolinensis 52.87 5.00e-24 102.00
IUUC-Ath-007267 Arabidopsis thaliana 97.61 6.00e-96 342.00
IUUC-Ame-011316 Astyanax mexicanus 54.64 1.00e-26 112.00
IUUC-Bta-012734 Bos taurus 58.33 3.00e-23 100.00
IUUC-Bdi-014183 Brachypodium distachyon 67.11 2.00e-52 197.00
IUUC-Bol-015663 Brassica oleracea 86.26 5.00e-76 276.00
IUUC-Bra-017113 Brassica rapa 87.68 1.00e-86 311.00
IUUC-Cel-018228 Caenorhabditis elegans 49.57 5.00e-29 120.00
IUUC-Cja-019136 Callithrix jacchus 58.33 2.00e-23 101.00
IUUC-Cfa-020308 Canis familiaris 58.33 2.00e-23 100.00
IUUC-Cpo-021347 Cavia porcellus 58.33 2.00e-23 101.00
IUUC-Cre-022829 Chlamydomonas reinhardtii 55.06 2.00e-26 109.00
IUUC-Csa-023755 Chlorocebus sabaeus 58.33 1.00e-23 101.00
IUUC-Dre-028094 Danio rerio 56.94 6.00e-23 99.80
IUUC-Dno-029402 Dasypus novemcinctus 58.33 2.00e-23 100.00
IUUC-Dor-030373 Dipodomys ordii 58.33 2.00e-23 100.00
IUUC-Dme-031966 Drosophila melanogaster 54.44 1.00e-26 112.00
IUUC-Ete-032786 Echinops telfairi 58.33 2.00e-23 101.00
IUUC-Eca-034261 Equus caballus 58.33 2.00e-23 100.00
IUUC-Eeu-034614 Erinaceus europaeus 48.61 5.00e-16 76.60
IUUC-Fca-036049 Felis catus 58.33 2.00e-23 100.00
IUUC-Fal-037085 Ficedula albicollis 56.00 1.00e-23 101.00
IUUC-Gmo-039369 Gadus morhua 55.13 3.00e-23 100.00
IUUC-Gac-042258 Gasterosteus aculeatus 54.55 4.00e-26 110.00
IUUC-Gma-043172 Glycine max 69.27 4.00e-70 256.00
IUUC-Ggo-044504 Gorilla gorilla 58.33 2.00e-23 100.00
IUUC-Hsa-045707 Homo sapiens 58.33 2.00e-23 100.00
IUUC-Hvu-047043 Hordeum vulgare 66.67 8.00e-51 192.00
IUUC-Itr-048343 Ictidomys tridecemlineatus 58.33 2.00e-23 101.00
IUUC-Lch-050658 Latimeria chalumnae 58.33 3.00e-23 100.00
IUUC-Loc-052118 Lepisosteus oculatus 59.70 6.00e-23 99.40
IUUC-Laf-054438 Loxodonta africana 58.33 1.00e-23 101.00
IUUC-Mcc-054833 Macaca mulatta 53.49 6.00e-25 106.00
IUUC-Mor-057077 Magnaporthe oryzae 44.07 1.00e-09 57.00
IUUC-Mtr-058130 Medicago truncatula 61.54 4.00e-60 223.00
IUUC-Mmr-061662 Microcebus murinus 48.00 4.00e-15 73.60
IUUC-Mdo-062774 Monodelphis domestica 58.33 2.00e-23 100.00
IUUC-Mmu-063372 Mus musculus 58.33 6.00e-23 100.00
IUUC-Mac-065053 Musa acuminata 64.74 4.00e-55 207.00
IUUC-Mlu-067254 Myotis lucifugus 58.33 2.00e-23 100.00
IUUC-Nle-069850 Nomascus leucogenys 58.33 2.00e-23 100.00
IUUC-Opr-070197 Ochotona princeps 60.32 7.00e-22 95.90
IUUC-Ont-072482 Oreochromis niloticus 55.68 2.00e-26 111.00
IUUC-Oan-073480 Ornithorhynchus anatinus 58.33 2.00e-23 100.00
IUUC-Ocu-074208 Oryctolagus cuniculus 53.49 1.00e-24 105.00
IUUC-Obr-076382 Oryza brachyantha 62.42 5.00e-48 183.00
IUUC-Ogl-077553 Oryza glaberrima 62.33 5.00e-48 183.00
IUUC-Ogu-078463 Oryza glumaepatula 61.64 5.00e-47 179.00
IUUC-Oin-080177 Oryza indica 62.33 4.00e-48 183.00
IUUC-Olo-080378 Oryza longistaminata 64.43 7.00e-53 199.00
IUUC-Ome-081605 Oryza meridionalis 62.07 7.00e-43 166.00
IUUC-Oni-082458 Oryza nivara 62.33 9.00e-48 183.00
IUUC-Opu-083362 Oryza punctata 62.59 2.00e-45 175.00
IUUC-Oru-084757 Oryza rufipogon 63.01 2.00e-47 181.00
IUUC-Osa-086198 Oryza sativa 63.01 2.00e-47 182.00
IUUC-Ola-086507 Oryzias latipes 51.55 9.00e-28 115.00
IUUC-Oar-090284 Ovis aries 53.49 2.00e-24 104.00
IUUC-Ptr-091106 Pan troglodytes 58.33 2.00e-23 100.00
IUUC-Pan-092671 Papio anubis 58.33 1.00e-23 101.00
IUUC-Psi-093323 Pelodiscus sinensis 58.33 2.00e-23 101.00
IUUC-Pfo-096818 Poecilia formosa 54.55 4.00e-26 110.00
IUUC-Pab-097845 Pongo abelii 58.33 2.00e-23 100.00
IUUC-Pop-098889 Populus trichocarpa 69.23 5.00e-69 253.00
IUUC-Pca-100319 Procavia capensis 52.87 3.00e-25 107.00
IUUC-Ppe-101752 Prunus persica 69.63 3.00e-74 271.00
IUUC-Pva-102298 Pteropus vampyrus 58.33 2.00e-23 100.00
IUUC-Rno-105293 Rattus norvegicus 58.33 1.00e-23 102.00
IUUC-Sha-107361 Sarcophilus harrisii 58.33 1.00e-23 101.00
IUUC-Smo-109663 Selaginella moellendorffii 49.21 2.00e-33 133.00
IUUC-Sit-110376 Setaria italica 61.11 3.00e-48 184.00
IUUC-Sly-111255 Solanum lycopersicum 57.79 4.00e-52 196.00
IUUC-Stu-112117 Solanum tuberosum 57.81 9.00e-50 189.00
IUUC-Sbi-114116 Sorghum bicolor 63.33 7.00e-51 192.00
IUUC-Ssc-116228 Sus scrofa 58.33 2.00e-23 100.00
IUUC-Tgu-116886 Taeniopygia guttata 56.00 1.00e-23 101.00
IUUC-Tni-120909 Tetraodon nigroviridis 55.70 3.00e-24 103.00
IUUC-Tca-121264 Theobroma cacao 76.28 8.00e-68 249.00
IUUC-Tae-124257 Triticum aestivum 67.33 1.00e-51 195.00
IUUC-Tur-126443 Triticum urartu 67.33 1.00e-51 195.00
IUUC-Tbe-127360 Tupaia belangeri 58.33 2.00e-23 101.00
IUUC-Ttr-129044 Tursiops truncatus 58.33 2.00e-23 100.00
IUUC-Vda-129983 Verticillium dahliae 45.28 3.00e-09 53.90
IUUC-Vpa-130365 Vicugna pacos 56.94 2.00e-22 98.20
IUUC-Vvi-131449 Vitis vinifera 71.65 2.00e-76 277.00
IUUC-Xma-134225 Xiphophorus maculatus 54.55 3.00e-26 110.00
Created Date 25-Jun-2017

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