• HOME
  • BROWSE
  • SEARCH
  • LINK
  • DOWNLOAD
  • USER GUIDE
  • Protein
  • Gene
  • Annotation
  • Classification
  • Domain Profile
  • Function
  • Protein Sequence
  • Nucleotide Sequence
  • Keyword
  • GO
  • Orthology
  • TOP

Tag Content
iUUCD ID IUUC-Bra-017952
Ensembl Protein ID Bra019379.1-P
UniProt Accession M4DS86; M4DS86_BRARP
Protein Name Uncharacterized protein
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra019379 Bra019379.1 Bra019379.1-P
Status Unreviewed
Classification
Family E-Value Score Start End
DUB/USP 1.00e-39 137.7 177 483
Active Site
Position(s) Description Evidence
N/A N/A N/A
Domain Profile

   DUB/USP

   S: 1    tGlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelw..kskkkavsprellkalkkeaee.fsgyeqqDaq 93
    +Gl+N++ t ++N ++Q+L+ +++lr+++l +e+ + + k +l++ + +l +++w + k++vsp+e+l+a+ k++++ f+ +q D
   Q: 177 VGLNNIQRTEFVNVTIQSLMRVTPLRNFFLI--PENYQ-----HCKSPLVHRFGELTRKIWhaRNFKGQVSPHEFLQAVMKASKKrFRIGQQSDPV 265
    6******************************..55554.....45679*************999999**********998888777********** PP
   S: 94 EflaflldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvssreepfldlslpvp.........gke 180
    Ef+++ll++l+ +l ++ k +s+i++ Fqg+l+ + +++ ++ pfl l l++p +
   Q: 266 EFMSWLLNTLHMDL-------------------------RTSKDASSIIHQCFQGELEVVREYQGNESKEISRMPFLMLGLDLPppplfkdvmE-- 334
    **************.........................678999*************9999**********************5554332222.. PP
   S: 181 etkke......slqdcLesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefple.Ldlspfcts.. 267
    + l d+L++f e e + + + a+ + +++k P++L++h+ Rf ++++ ++ek+ + v+fp + ++l+ + s
   Q: 335 ----KniipqvALFDLLKKFDGETVTE----VV-----RPKLARMRYRVTKSPPYLMFHMVRF--KKNNFFKEKNPTLVNFPVKdMELRDYIPSlp 415
    ....12333335555555555554444....22.....233378889****************..88999************999****8776644 PP
   S: 268 .peekqkekkkYeLiavvvHsGslssGHYvayvknekgk.WllfdDskVtevkeeevleetgstaYvlfYk 336
    e+ k++ kY+Lia +vH G+++ G + ++v+ ++++ W+++ D +V e+ + v+ s+aY+ +Y+
   Q: 416 tAAEGGKVSSKYNLIANIVHDGKPEDGYFRVFVQRKSQElWYEMQDLHVAETLPQMVEL---SEAYMQIYE 483
    43444456***************************88889*******************...********8 PP
   

Organism Brassica rapa
Protein Sequence
(Fasta)
MKSEREEVKN GGVEEEEERE LKRKREKEQS PPLDELEDDA FKGRGKHSRN VEVRRDCPYL 60
DTVNRQVLDF DFERFCSVSL SNLNVYACLV CGKYFQGRSQ KSHAYTHSLE AGHHVYINLL 120
It may take some time, please wait.

Protein Fasta Sequence



>IUUC-Bra-017952|DUB,USP|Brassica rapa
Please wait for a moment...
Nucleotide Sequence
(Fasta)
ATGAAAAGTG AGAGAGAAGA AGTCAAGAAC GGTGGTGTTG AGGAGGAGGA AGAGAGAGAG 60
CTGAAGCGGA AGAGAGAGAA GGAACAGTCT CCACCACTGG ATGAGCTCGA AGACGACGCC 120
It may take some time, please wait.

Nucleotide Fasta Sequence



>IUUC-Bra-017952|DUB,USP|Brassica rapa
Please wait for a moment...
Sequence Source Ensembl
Keyword

KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR001394--Peptidase_C19_UCH
IPR033809--USP39
IPR028889--USP_dom
IPR013083--Znf_RING/FYVE/PHD
IPR001607--Znf_UBP

PROSITE

PS50235--USP_3
PS50271--ZF_UBP

Pfam

PF00443--UCH
PF02148--zf-UBP

SMART

SM00290--ZnF_UBP

Gene Ontology

GO:0036459--F:thiol-dependent ubiquitinyl hydrolase activity
GO:0008270--F:zinc ion binding
GO:0016579--P:protein deubiquitination
GO:0000245--P:spliceosomal complex assembly

Orthology
iUUCD ID Species Identity E-value Score
IUUC-Ata-000483 Aegilops tauschii 75.82 0.00e+00 670.00
IUUC-Aml-001846 Ailuropoda melanoleuca 51.10 7.00e-125 440.00
IUUC-Apl-003336 Anas platyrhynchos 43.75 1.00e-57 216.00
IUUC-Aca-004846 Anolis carolinensis 50.56 8.00e-119 420.00
IUUC-Aly-005683 Arabidopsis lyrata 96.65 0.00e+00 842.00
IUUC-Ath-007652 Arabidopsis thaliana 95.98 0.00e+00 834.00
IUUC-Ame-011688 Astyanax mexicanus 50.88 4.00e-128 451.00
IUUC-Bta-013407 Bos taurus 50.88 6.00e-124 437.00
IUUC-Bdi-014361 Brachypodium distachyon 77.51 0.00e+00 686.00
IUUC-Bol-015968 Brassica oleracea 98.89 0.00e+00 865.00
IUUC-Cfa-020098 Canis familiaris 49.17 5.00e-124 437.00
IUUC-Cpo-021595 Cavia porcellus 50.88 9.00e-124 436.00
IUUC-Cre-022886 Chlamydomonas reinhardtii 53.60 2.00e-32 130.00
IUUC-Csa-024121 Chlorocebus sabaeus 49.17 4.00e-124 438.00
IUUC-Cho-025057 Choloepus hoffmanni 44.06 4.00e-45 175.00
IUUC-Csv-025815 Ciona savignyi 57.08 5.00e-83 301.00
IUUC-Dre-027870 Danio rerio 50.96 9.00e-129 453.00
IUUC-Dno-029655 Dasypus novemcinctus 50.99 7.00e-124 437.00
IUUC-Dor-030762 Dipodomys ordii 50.88 5.00e-124 437.00
IUUC-Dme-032101 Drosophila melanogaster 49.45 7.00e-121 427.00
IUUC-Ete-032841 Echinops telfairi 48.02 1.00e-114 406.00
IUUC-Eca-033463 Equus caballus 50.88 5.00e-124 437.00
IUUC-Eeu-034438 Erinaceus europaeus 54.21 5.00e-66 244.00
IUUC-Fca-035774 Felis catus 50.88 6.00e-124 437.00
IUUC-Fal-036988 Ficedula albicollis 51.09 2.00e-127 448.00
IUUC-Gmo-038874 Gadus morhua 49.89 4.00e-124 437.00
IUUC-Gac-041650 Gasterosteus aculeatus 50.42 9.00e-125 440.00
IUUC-Ggo-044707 Gorilla gorilla 46.88 1.00e-110 393.00
IUUC-Hsa-046041 Homo sapiens 49.17 5.00e-124 437.00
IUUC-Hvu-047816 Hordeum vulgare 73.04 0.00e+00 647.00
IUUC-Itr-048945 Ictidomys tridecemlineatus 51.54 2.00e-87 315.00
IUUC-Lch-050419 Latimeria chalumnae 50.65 2.00e-126 446.00
IUUC-Loc-052930 Lepisosteus oculatus 50.00 5.00e-130 457.00
IUUC-Laf-053555 Loxodonta africana 50.55 9.00e-124 437.00
IUUC-Mcc-055630 Macaca mulatta 49.17 4.00e-124 438.00
IUUC-Mmr-061313 Microcebus murinus 50.88 7.00e-124 437.00
IUUC-Mdo-062801 Monodelphis domestica 51.10 4.00e-124 437.00
IUUC-Mmu-064424 Mus musculus 50.88 9.00e-126 443.00
IUUC-Mac-064694 Musa acuminata 77.24 0.00e+00 690.00
IUUC-Mpu-065980 Mustela putorius furo 48.06 1.00e-100 359.00
IUUC-Mlu-067007 Myotis lucifugus 50.44 4.00e-124 437.00
IUUC-Nle-069171 Nomascus leucogenys 50.88 8.00e-124 437.00
IUUC-Opr-070494 Ochotona princeps 43.51 1.00e-99 357.00
IUUC-Ont-072290 Oreochromis niloticus 51.06 1.00e-129 456.00
IUUC-Oan-073099 Ornithorhynchus anatinus 51.32 7.00e-125 440.00
IUUC-Ocu-074642 Oryctolagus cuniculus 50.88 6.00e-124 437.00
IUUC-Obr-076220 Oryza brachyantha 76.29 0.00e+00 702.00
IUUC-Oin-079956 Oryza indica 76.96 0.00e+00 704.00
IUUC-Olo-080239 Oryza longistaminata 66.67 1.00e-165 577.00
IUUC-Oni-082975 Oryza nivara 76.96 0.00e+00 704.00
IUUC-Ola-086967 Oryzias latipes 51.53 5.00e-129 454.00
IUUC-Oga-088047 Otolemur garnettii 44.44 2.00e-71 263.00
IUUC-Oar-089393 Ovis aries 50.88 6.00e-124 437.00
IUUC-Ptr-090561 Pan troglodytes 49.17 6.00e-124 437.00
IUUC-Pfo-096754 Poecilia formosa 51.74 6.00e-130 457.00
IUUC-Pab-098053 Pongo abelii 49.17 6.00e-124 437.00
IUUC-Pca-100407 Procavia capensis 43.54 3.00e-99 355.00
IUUC-Rno-105531 Rattus norvegicus 50.66 1.00e-125 442.00
IUUC-Sha-107093 Sarcophilus harrisii 50.00 1.00e-124 439.00
IUUC-Sit-110782 Setaria italica 77.87 0.00e+00 707.00
IUUC-Sar-113352 Sorex araneus 47.61 1.00e-87 316.00
IUUC-Sbi-114806 Sorghum bicolor 77.41 0.00e+00 691.00
IUUC-Ssc-115677 Sus scrofa 51.54 3.00e-87 315.00
IUUC-Tru-118478 Takifugu rubripes 51.96 3.00e-129 454.00
IUUC-Tsy-119082 Tarsius syrichta 44.41 8.00e-79 287.00
IUUC-Tni-120419 Tetraodon nigroviridis 51.52 9.00e-125 439.00
IUUC-Tre-121962 Trichoderma reesei 46.05 4.00e-99 355.00
IUUC-Tae-124442 Triticum aestivum 77.73 0.00e+00 703.00
IUUC-Tur-126551 Triticum urartu 77.73 0.00e+00 701.00
IUUC-Tbe-127737 Tupaia belangeri 50.23 2.00e-117 416.00
IUUC-Ttr-129211 Tursiops truncatus 59.05 3.00e-82 298.00
IUUC-Vpa-130793 Vicugna pacos 45.68 9.00e-106 377.00
IUUC-Xtr-132430 Xenopus tropicalis 49.47 7.00e-122 430.00
IUUC-Xma-133515 Xiphophorus maculatus 51.75 2.00e-129 455.00
IUUC-Yli-134488 Yarrowia lipolytica 39.37 5.00e-75 274.00
Created Date 25-Jun-2017

https://dev.news.makassarkota.go.id/public/pgsoft-demo/ https://jdih.sumbawabaratkab.go.id/lato/pg-soft-demo/ https://dev.news.makassarkota.go.id/public/slot-gacor/ http://pbb.tanahbumbukab.go.id/-/slot-gacor/ slot gacor https://siakad.unipra.ac.id/sass/slot-gacor-x500/ http://kpm.dinus.ac.id/assets/images/berita/slot/
Copyright © 2004-2017.The CUCKOO Workgroup. All Rights Reserved