iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Mdo-062155

Ensembl Protein ID

ENSMODP00000032086.2

UniProt Accession

F7FMK0; F7FMK0_MONDO

Protein Name

Uncharacterized protein

Gene Name

TNRC6C

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSMODG00000001785.4	ENSMODT00000033662.3	ENSMODP00000032086.2

Status

Unreviewed

Classification

Family	Identity	E-Value	Score	Source Orthology
UBD/Alpha-Helix/UBA	41.53	1.00e-30	133.00	IUUC-Dme-032014

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Organism

Monodelphis domestica

Protein Sequence
(Fasta)

MEEKKKKKQE EKKKKESAQK KAADQKTKVP EPTKTSSSQP QSAGISTSTS TSTITNSSNG 60
KRASANGHQP AASRYLPREV PPRFRQQEQK QLLKRGQPLP PGTLTSVSPT QGTGQAGASP 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

AGAGAAGGGC AGATCGAGGA CCTGGACCTG TCAGGATCCG ACGCTGCCGC TTCCTTGCTC 60
TCTCTGCTGC CTCGGCCTCC TCCCACCCAC TGCCCGGGCC GGACTCCTCG CAGGCGGGAA 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR019486--Argonaute_hook_dom
IPR026805--GW182_M_dom
IPR012677--Nucleotide-bd_a/b_plait
IPR000504--RRM_dom
IPR032226--TNRC6_PABC-bd
IPR033499--TNRC6C
IPR015940--UBA
IPR009060--UBA-like

PROSITE

PS50030--UBA

Pfam

PF10427--Ago_hook
PF12938--M_domain
PF00076--RRM_1
PF16608--TNRC6-PABC_bdg
PF00627--UBA

SMART

SM00165--UBA

Gene Ontology

GO:0003676--F:nucleic acid binding
GO:0000166--F:nucleotide binding
GO:0035278--P:miRNA mediated inhibition of translation
GO:0060213--P:positive regulation of nuclear-transcribed mRNA poly(A) tail shortening

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001985	Ailuropoda melanoleuca	41.02	0.00e+00	848.00
IUUC-Apl-003191	Anas platyrhynchos	83.52	0.00e+00	2390.00
IUUC-Aca-004717	Anolis carolinensis	84.70	0.00e+00	2481.00
IUUC-Ame-010681	Astyanax mexicanus	58.01	0.00e+00	820.00
IUUC-Bta-012915	Bos taurus	36.97	2.00e-127	451.00
IUUC-Cja-019614	Callithrix jacchus	84.40	0.00e+00	2102.00
IUUC-Cfa-020452	Canis familiaris	37.32	1.00e-135	478.00
IUUC-Cpo-021452	Cavia porcellus	82.85	0.00e+00	2233.00
IUUC-Csa-023169	Chlorocebus sabaeus	40.96	0.00e+00	839.00
IUUC-Cho-024655	Choloepus hoffmanni	40.03	1.00e-125	445.00
IUUC-Dre-028059	Danio rerio	57.57	0.00e+00	1097.00
IUUC-Dno-029734	Dasypus novemcinctus	40.17	0.00e+00	812.00
IUUC-Dor-030671	Dipodomys ordii	44.44	0.00e+00	672.00
IUUC-Dme-032014	Drosophila melanogaster	38.25	3.00e-30	127.00
IUUC-Ete-032774	Echinops telfairi	78.20	0.00e+00	1402.00
IUUC-Eca-033866	Equus caballus	85.29	0.00e+00	2097.00
IUUC-Eeu-034572	Erinaceus europaeus	62.28	1.00e-40	163.00
IUUC-Fal-036856	Ficedula albicollis	83.69	0.00e+00	2029.00
IUUC-Gga-040531	Gallus gallus	87.08	0.00e+00	2415.00
IUUC-Gac-041681	Gasterosteus aculeatus	53.40	0.00e+00	902.00
IUUC-Ggo-045143	Gorilla gorilla	84.35	0.00e+00	2133.00
IUUC-Hsa-045913	Homo sapiens	86.08	0.00e+00	2135.00
IUUC-Hvu-047206	Hordeum vulgare	30.91	2.80e-01	30.40
IUUC-Lch-049619	Latimeria chalumnae	44.95	2.00e-177	617.00
IUUC-Loc-052289	Lepisosteus oculatus	75.35	0.00e+00	1031.00
IUUC-Laf-053607	Loxodonta africana	85.61	0.00e+00	2457.00
IUUC-Mcc-055342	Macaca mulatta	85.54	0.00e+00	2092.00
IUUC-Meu-056275	Macropus eugenii	48.86	3.00e-103	371.00
IUUC-Mtr-058185	Medicago truncatula	42.22	4.00e-03	36.60
IUUC-Mga-059241	Meleagris gallopavo	40.27	1.00e-155	545.00
IUUC-Mmr-061348	Microcebus murinus	37.70	3.00e-133	470.00
IUUC-Mmu-064259	Mus musculus	43.54	0.00e+00	730.00
IUUC-Mpu-066534	Mustela putorius furo	37.06	2.00e-97	351.00
IUUC-Mlu-067834	Myotis lucifugus	40.95	0.00e+00	868.00
IUUC-Nle-069168	Nomascus leucogenys	40.45	0.00e+00	818.00
IUUC-Opr-070976	Ochotona princeps	35.43	2.00e-76	281.00
IUUC-Ocu-074534	Oryctolagus cuniculus	67.38	0.00e+00	843.00
IUUC-Oga-088116	Otolemur garnettii	41.09	0.00e+00	845.00
IUUC-Oar-090041	Ovis aries	36.43	5.00e-114	406.00
IUUC-Ptr-091135	Pan troglodytes	83.33	0.00e+00	2081.00
IUUC-Pan-092665	Papio anubis	83.62	0.00e+00	2073.00
IUUC-Psi-093057	Pelodiscus sinensis	85.53	0.00e+00	2234.00
IUUC-Pma-094508	Petromyzon marinus	49.06	1.00e-54	207.00
IUUC-Pfo-097115	Poecilia formosa	53.47	0.00e+00	644.00
IUUC-Pab-097935	Pongo abelii	40.80	0.00e+00	841.00
IUUC-Pca-100481	Procavia capensis	72.37	0.00e+00	1190.00
IUUC-Pva-102376	Pteropus vampyrus	40.48	8.00e-65	243.00
IUUC-Rno-105508	Rattus norvegicus	37.77	4.00e-127	450.00
IUUC-Sar-113036	Sorex araneus	61.08	8.00e-42	166.00
IUUC-Ssc-115574	Sus scrofa	68.19	0.00e+00	1405.00
IUUC-Tgu-117233	Taeniopygia guttata	86.41	0.00e+00	2160.00
IUUC-Tru-117725	Takifugu rubripes	55.04	0.00e+00	989.00
IUUC-Tsy-118786	Tarsius syrichta	42.07	6.00e-55	210.00
IUUC-Tbe-127989	Tupaia belangeri	79.03	0.00e+00	731.00
IUUC-Ttr-128518	Tursiops truncatus	84.80	0.00e+00	2232.00
IUUC-Vpa-130230	Vicugna pacos	44.42	2.00e-75	278.00
IUUC-Xtr-132265	Xenopus tropicalis	74.42	0.00e+00	1837.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence