iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Pop-099471

Ensembl Protein ID

POPTR_0005s24010.1

UniProt Accession

B9H8H4; B9H8H4_POPTR

Genbank Protein ID

EEE93815.2

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000341

Gene Name

POPTRDRAFT_801448; POPTR_0005s24010g

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
POPTR_0005s24010	POPTR_0005s24010.1	POPTR_0005s24010.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	8.90e-09	36.4	414	449

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 4    dsvtclaf.sd.tllvsGsdDgtikvWDlrtgvllk 37
           + v++laf +d   l+s ++Dg+++ WDlrt  +++
   Q: 414  GTVRSLAFaDDgQQLLSHGGDGQVYHWDLRTRACIH 449
           689******88899***999**********988875 PP

Organism

Populus trichocarpa

Protein Sequence
(Fasta)

MSLISQNVGS KNRVKRSNAD EPAFLGVNNS NADADEPAFL GVNNSNADEP AFLGVHKDDE 60
GRIESDLVLS KTKKKRKERD ELLEKQLEIE EGKEMKKLEN FLFGSLYSPV EFGKEEEKKD 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGTTTGA TATCTCAAAA TGTTGGCTCA AAAAATAGAG TTAAGCGCTC AAATGCTGAT 60
GAGCCTGCTT TTTTGGGGGT GAATAATTCA AATGCTGATG CTGATGAGCC TGCTTTTTTG 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0677--Repeat
KW-0853--WD repeat

Interpro

IPR002469--Peptidase_S9B_N
IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Gene Ontology

GO:0034388--C:Pwp2p-containing subcomplex of 90S preribosome
GO:0032040--C:small-subunit processome
GO:0000462--P:maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)

KEGG

pop:POPTR_0005s24010g

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000184	Aegilops tauschii	61.83	0.00e+00	649.00
IUUC-Aml-002252	Ailuropoda melanoleuca	37.03	3.00e-76	278.00
IUUC-Atr-002575	Amborella trichopoda	58.28	0.00e+00	682.00
IUUC-Aly-006512	Arabidopsis lyrata	68.24	0.00e+00	667.00
IUUC-Ath-007244	Arabidopsis thaliana	69.26	0.00e+00	679.00
IUUC-Ago-007895	Ashbya gossypii	30.77	3.00e-48	185.00
IUUC-Acl-008343	Aspergillus clavatus	28.12	1.00e-50	194.00
IUUC-Afl-008445	Aspergillus flavus	28.38	2.00e-54	206.00
IUUC-Aor-009986	Aspergillus oryzae	28.57	8.00e-54	204.00
IUUC-Ame-011338	Astyanax mexicanus	35.76	2.00e-75	276.00
IUUC-Bgr-012201	Blumeria graminis	28.43	1.00e-51	197.00
IUUC-Bta-013058	Bos taurus	38.24	4.00e-78	285.00
IUUC-Bci-013619	Botrytis cinerea	27.57	3.00e-50	192.00
IUUC-Bdi-014771	Brachypodium distachyon	60.36	4.00e-177	613.00
IUUC-Bol-015230	Brassica oleracea	64.86	5.00e-177	613.00
IUUC-Bra-017041	Brassica rapa	64.46	4.00e-173	600.00
IUUC-Cel-018293	Caenorhabditis elegans	27.07	2.00e-46	179.00
IUUC-Cja-019503	Callithrix jacchus	37.83	7.00e-77	280.00
IUUC-Cfa-020743	Canis familiaris	37.42	1.00e-76	280.00
IUUC-Cpo-021488	Cavia porcellus	43.21	6.00e-75	274.00
IUUC-Cre-022926	Chlamydomonas reinhardtii	40.60	4.00e-90	324.00
IUUC-Csa-023110	Chlorocebus sabaeus	36.93	9.00e-77	280.00
IUUC-Cin-025208	Ciona intestinalis	38.28	1.00e-69	256.00
IUUC-Cme-027351	Cyanidioschyzon merolae	31.64	3.00e-56	212.00
IUUC-Dre-027524	Danio rerio	30.13	2.00e-60	226.00
IUUC-Dno-029243	Dasypus novemcinctus	38.99	3.00e-75	275.00
IUUC-Dor-030110	Dipodomys ordii	44.19	2.00e-75	276.00
IUUC-Dse-031217	Dothistroma septosporum	28.98	4.00e-47	182.00
IUUC-Dme-031999	Drosophila melanogaster	32.64	2.00e-51	196.00
IUUC-Eca-034350	Equus caballus	35.32	2.00e-75	276.00
IUUC-Eeu-034991	Erinaceus europaeus	41.53	2.00e-71	263.00
IUUC-Fal-036614	Ficedula albicollis	41.34	3.00e-73	268.00
IUUC-Gmo-039183	Gadus morhua	39.16	8.00e-72	263.00
IUUC-Gga-040922	Gallus gallus	36.73	2.00e-77	282.00
IUUC-Gac-041475	Gasterosteus aculeatus	36.41	8.00e-68	250.00
IUUC-Gma-043598	Glycine max	75.10	0.00e+00	777.00
IUUC-Ggo-044517	Gorilla gorilla	37.34	5.00e-77	281.00
IUUC-Hsa-045741	Homo sapiens	37.34	5.00e-77	281.00
IUUC-Itr-048128	Ictidomys tridecemlineatus	37.42	5.00e-78	284.00
IUUC-Kpa-049335	Komagataella pastoris	32.91	2.00e-61	229.00
IUUC-Lch-049816	Latimeria chalumnae	42.64	5.00e-78	284.00
IUUC-Lpe-051140	Leersia perrieri	63.73	0.00e+00	626.00
IUUC-Loc-051942	Lepisosteus oculatus	36.22	3.00e-69	255.00
IUUC-Laf-054245	Loxodonta africana	36.80	6.00e-76	277.00
IUUC-Meu-056300	Macropus eugenii	36.06	3.00e-60	224.00
IUUC-Mor-057184	Magnaporthe oryzae	27.96	7.00e-43	167.00
IUUC-Mtr-058019	Medicago truncatula	65.92	0.00e+00	736.00
IUUC-Mga-060179	Meleagris gallopavo	38.11	4.00e-76	278.00
IUUC-Mvi-060435	Microbotryum violaceum	35.36	6.00e-72	264.00
IUUC-Mdo-062187	Monodelphis domestica	40.96	7.00e-72	264.00
IUUC-Mmu-063386	Mus musculus	36.82	7.00e-76	277.00
IUUC-Mpu-066084	Mustela putorius furo	42.25	6.00e-76	277.00
IUUC-Mlu-068130	Myotis lucifugus	35.90	2.00e-72	265.00
IUUC-Nle-069743	Nomascus leucogenys	33.88	1.00e-63	236.00
IUUC-Opr-071111	Ochotona princeps	42.07	1.00e-75	276.00
IUUC-Ont-071979	Oreochromis niloticus	34.85	1.00e-74	273.00
IUUC-Ocu-073754	Oryctolagus cuniculus	38.08	1.00e-77	283.00
IUUC-Oba-075007	Oryza barthii	62.98	0.00e+00	629.00
IUUC-Obr-076447	Oryza brachyantha	63.89	0.00e+00	650.00
IUUC-Ogl-077733	Oryza glaberrima	62.98	0.00e+00	629.00
IUUC-Ogu-078828	Oryza glumaepatula	62.98	0.00e+00	630.00
IUUC-Oin-080152	Oryza indica	62.78	0.00e+00	629.00
IUUC-Olo-080983	Oryza longistaminata	62.37	0.00e+00	628.00
IUUC-Oni-082443	Oryza nivara	62.78	0.00e+00	629.00
IUUC-Opu-083771	Oryza punctata	61.37	7.00e-177	613.00
IUUC-Oru-084272	Oryza rufipogon	62.78	0.00e+00	629.00
IUUC-Osa-085885	Oryza sativa	63.49	0.00e+00	633.00
IUUC-Olu-087644	Ostreococcus lucimarinus	27.24	2.00e-32	132.00
IUUC-Oga-088834	Otolemur garnettii	37.63	3.00e-77	282.00
IUUC-Oar-089712	Ovis aries	38.02	9.00e-78	283.00
IUUC-Pan-092561	Papio anubis	37.14	9.00e-77	280.00
IUUC-Ppa-095397	Physcomitrella patens	53.64	4.00e-132	464.00
IUUC-Pfo-097068	Poecilia formosa	35.55	7.00e-72	264.00
IUUC-Ppe-101446	Prunus persica	73.07	0.00e+00	817.00
IUUC-Pva-102851	Pteropus vampyrus	35.83	6.00e-69	254.00
IUUC-Pgr-103370	Puccinia graminis	32.12	1.00e-63	236.00
IUUC-Ptt-103838	Puccinia triticina	31.56	3.00e-56	212.00
IUUC-Rno-104910	Rattus norvegicus	37.67	8.00e-77	280.00
IUUC-Sce-106258	Saccharomyces cerevisiae	32.99	6.00e-56	211.00
IUUC-Sja-107746	Schizosaccharomyces japonicus	33.49	9.00e-71	260.00
IUUC-Spo-108268	Schizosaccharomyces pombe	34.02	6.00e-76	277.00
IUUC-Smo-108815	Selaginella moellendorffii	49.90	5.00e-146	510.00
IUUC-Sit-109706	Setaria italica	57.21	0.00e+00	649.00
IUUC-Sly-111533	Solanum lycopersicum	69.80	0.00e+00	711.00
IUUC-Stu-112853	Solanum tuberosum	71.51	0.00e+00	723.00
IUUC-Sbi-114747	Sorghum bicolor	57.38	0.00e+00	665.00
IUUC-Ssc-115916	Sus scrofa	37.92	3.00e-76	278.00
IUUC-Tgu-117291	Taeniopygia guttata	40.61	2.00e-73	269.00
IUUC-Tru-118724	Takifugu rubripes	32.69	3.00e-73	268.00
IUUC-Tsy-118928	Tarsius syrichta	43.93	9.00e-51	194.00
IUUC-Tca-121229	Theobroma cacao	73.45	0.00e+00	825.00
IUUC-Tae-123598	Triticum aestivum	62.70	0.00e+00	660.00
IUUC-Tur-126082	Triticum urartu	51.06	1.00e-102	365.00
IUUC-Ttr-128904	Tursiops truncatus	42.24	2.00e-62	233.00
IUUC-Vpa-130817	Vicugna pacos	37.53	1.00e-78	286.00
IUUC-Vvi-130982	Vitis vinifera	79.23	0.00e+00	774.00
IUUC-Xtr-132971	Xenopus tropicalis	38.85	8.00e-82	297.00
IUUC-Xma-133391	Xiphophorus maculatus	34.64	8.00e-72	264.00
IUUC-Yli-134613	Yarrowia lipolytica	29.94	8.00e-58	217.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence