iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-114821

UUCD1 version

UUC-SoB-00072

Ensembl Protein ID

Sb01g030230.1

UniProt Accession

A0A1B6QM39; A0A1B6QM39_SORBI

Genbank Protein ID

KXG38988.1

Protein Name

Uncharacterized protein

Genbank Nucleotide ID

CM000760

Gene Name

SORBI_001G310100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb01g030230	Sb01g030230.1	Sb01g030230.1
Sb01g030230	Sb01g030230.2	Sb01g030230.2

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 adaptor/Cullin RING/DCX/DWD	6.20e-24	83.9	59	93

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 adaptor/Cullin RING/DCX/DWD

   S: 2    Htdsvtclaf..sdtllvsGsdDgtikvWDlrtgv 34
           Ht+ v+ ++f   +++lvsGsdD  +++WD++tg+
   Q: 59   HTGCVNTVSFseVGDILVSGSDDQRVMLWDWDTGT 93
           9*********65339*****************997 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MRRPWRHPGP GAAVAARHGA ADLCLREVGD LLPRRFARRA AGSEDLVMRL QIHRKLDRHT 60
GCVNTVSFSE VGDILVSGSD DQRVMLWDWD TGTVKLEFHS GHGGNVFQAR FMPCSDDQTI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTGCTGCTCG CATTCACCAC ACAACACAAC CCACACTTCG TCTCGTCACC ATGCGCCGCC 60
CGTGGAGGCA CCCGGGCCCA GGGGCAGCCG TCGCGGCGCG CCACGGCGCC GCCGACCTCT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome
KW-0853--WD repeat

Interpro

IPR015943--WD40/YVTN_repeat-like_dom
IPR001680--WD40_repeat
IPR017986--WD40_repeat_dom

PROSITE

PS50082--WD_REPEATS_2
PS50294--WD_REPEATS_REGION

Pfam

PF00400--WD40

SMART

SM00320--WD40

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000666	Aegilops tauschii	75.79	0.00e+00	640.00
IUUC-Atr-002714	Amborella trichopoda	57.24	2.00e-128	451.00
IUUC-Apl-003181	Anas platyrhynchos	31.87	9.00e-36	144.00
IUUC-Aly-005505	Arabidopsis lyrata	55.71	4.00e-131	460.00
IUUC-Ath-007629	Arabidopsis thaliana	57.25	2.00e-128	451.00
IUUC-Bdi-014538	Brachypodium distachyon	73.96	0.00e+00	682.00
IUUC-Bol-015797	Brassica oleracea	53.59	6.00e-134	469.00
IUUC-Bra-017142	Brassica rapa	53.14	5.00e-134	470.00
IUUC-Cho-024527	Choloepus hoffmanni	27.64	1.00e-25	110.00
IUUC-Fal-037527	Ficedula albicollis	32.09	6.00e-37	148.00
IUUC-Gma-044062	Glycine max	60.15	6.00e-136	476.00
IUUC-Hvu-047075	Hordeum vulgare	76.39	0.00e+00	640.00
IUUC-Lpe-051327	Leersia perrieri	75.99	0.00e+00	707.00
IUUC-Mtr-058683	Medicago truncatula	58.85	3.00e-138	484.00
IUUC-Mga-059697	Meleagris gallopavo	39.91	2.00e-35	142.00
IUUC-Mac-065466	Musa acuminata	61.40	7.00e-162	562.00
IUUC-Oan-072748	Ornithorhynchus anatinus	26.86	1.00e-20	92.80
IUUC-Oba-075028	Oryza barthii	76.68	0.00e+00	700.00
IUUC-Obr-076114	Oryza brachyantha	77.78	0.00e+00	684.00
IUUC-Ogl-077918	Oryza glaberrima	76.68	0.00e+00	699.00
IUUC-Ogu-078824	Oryza glumaepatula	76.68	0.00e+00	697.00
IUUC-Oin-080061	Oryza indica	77.10	0.00e+00	701.00
IUUC-Olo-081064	Oryza longistaminata	77.08	0.00e+00	668.00
IUUC-Ome-081405	Oryza meridionalis	77.31	0.00e+00	703.00
IUUC-Oni-082481	Oryza nivara	75.20	0.00e+00	689.00
IUUC-Opu-083681	Oryza punctata	77.48	0.00e+00	693.00
IUUC-Oru-084398	Oryza rufipogon	77.31	0.00e+00	703.00
IUUC-Osa-086227	Oryza sativa	77.31	0.00e+00	699.00
IUUC-Ola-086755	Oryzias latipes	33.70	3.00e-36	146.00
IUUC-Pop-099784	Populus trichocarpa	55.82	9.00e-147	512.00
IUUC-Ppe-101712	Prunus persica	56.21	1.00e-148	518.00
IUUC-Sit-110744	Setaria italica	80.83	0.00e+00	762.00
IUUC-Sly-111727	Solanum lycopersicum	58.96	2.00e-138	484.00
IUUC-Stu-112421	Solanum tuberosum	58.71	5.00e-138	483.00
IUUC-Tgu-116760	Taeniopygia guttata	32.82	6.00e-36	145.00
IUUC-Tca-121555	Theobroma cacao	56.87	1.00e-137	482.00
IUUC-Tae-124601	Triticum aestivum	77.05	0.00e+00	676.00
IUUC-Tur-126617	Triticum urartu	77.08	0.00e+00	674.00
IUUC-Vpa-130145	Vicugna pacos	32.81	5.00e-35	142.00
IUUC-Vvi-131540	Vitis vinifera	54.08	1.00e-136	478.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence