iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Bta-013247

UUCD1 version

UUC-BoT-00863

Ensembl Protein ID

ENSBTAP00000022612.5

UniProt Accession

Q1JPC8; Q1JPC8_BOVIN

Genbank Protein ID

AAI26563.1; ABF57381.1

Protein Name

RanBP-type and C3HC4-type zinc finger containing 1; Ubiquitin conjugating enzyme 7 interacting protein 3

Genbank Nucleotide ID

DAAA02036376; BT025425

Gene Name

RBCK1; C20orf18

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
ENSBTAG00000017002.5	ENSBTAT00000022612.5	ENSBTAP00000022612.5

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
ULD/UDP/UBQ/UBQ_Other	4.40e-07	29.8	60	120

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

ULD/UDP/UBQ/UBQ_Other

   S: 4    tvksldgseltlk..vnpsdtVaeLKekiekklgippeqqrLiykGkiL.eddktLadyglk 62
            v++++  + t++  v p++tVa LK++++   g+pp  q++++ G+ L +d  tL ++g++
   Q: 60   SVEDAQMHTVTIWltVRPDMTVASLKDMVFLDYGFPPTLQQWVI-GQRLaRDQETLHSHGVR 120
           5666665577777889****************************.55555*********995 PP

Organism

Bos taurus

Protein Sequence
(Fasta)

MDEKIKKAEE VAQRLTRAVA GGDEQVAMQC AIWLAEQRVP LNVQLKPEVS PTQDIRLWVS 60
VEDAQMHTVT IWLTVRPDMT VASLKDMVFL DYGFPPTLQQ WVIGQRLARD QETLHSHGVR 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

TTTCCGCTGA AACTGCTGCC CTCCTTCTCA GGACTGACAG GGGCCGCCGC GGGCGCGAGG 60
GAGTTGGGCT GAAATCCCGC ACCCCGGAGG GCGCTCCAGC TCCCAGAGGG AGAAGGGCTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR016150--Casein_kin_II_reg-sub_b-sht
IPR002867--IBR_dom
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR027370--Znf-RING_LisH
IPR001876--Znf_RanBP2
IPR001841--Znf_RING
IPR013083--Znf_RING/FYVE/PHD
IPR017907--Znf_RING_CS

PROSITE

PS50053--UBIQUITIN_2
PS01358--ZF_RANBP2_1
PS00518--ZF_RING_1
PS50089--ZF_RING_2

Pfam

PF01485--IBR
PF13445--zf-RING_UBOX

SMART

SM00184--RING
SM00547--ZnF_RBZ

Gene Ontology

GO:0071797--C:LUBAC complex
GO:0043130--F:ubiquitin binding
GO:0004842--F:ubiquitin-protein transferase activity
GO:0008270--F:zinc ion binding
GO:0060546--P:negative regulation of necroptotic process
GO:0032088--P:negative regulation of NF-kappaB transcription factor activity
GO:2001238--P:positive regulation of extrinsic apoptotic signaling pathway
GO:0043123--P:positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0042346--P:positive regulation of NF-kappaB import into nucleus
GO:0051092--P:positive regulation of NF-kappaB transcription factor activity
GO:0043161--P:proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0097039--P:protein linear polyubiquitination
GO:0050852--P:T cell receptor signaling pathway

KEGG

bta:504400

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Aml-001540	Ailuropoda melanoleuca	90.98	0.00e+00	854.00
IUUC-Apl-003627	Anas platyrhynchos	56.76	6.00e-17	78.20
IUUC-Aca-004507	Anolis carolinensis	65.20	2.00e-156	545.00
IUUC-Ame-011008	Astyanax mexicanus	52.35	7.00e-143	500.00
IUUC-Cja-018880	Callithrix jacchus	93.33	0.00e+00	900.00
IUUC-Cfa-020477	Canis familiaris	93.53	0.00e+00	903.00
IUUC-Cpo-021558	Cavia porcellus	88.63	0.00e+00	848.00
IUUC-Csa-024129	Chlorocebus sabaeus	93.53	0.00e+00	863.00
IUUC-Cin-025630	Ciona intestinalis	39.39	2.00e-83	303.00
IUUC-Csv-026069	Ciona savignyi	50.40	3.00e-72	264.00
IUUC-Dre-027591	Danio rerio	51.45	4.00e-141	494.00
IUUC-Dno-029015	Dasypus novemcinctus	90.39	0.00e+00	852.00
IUUC-Dor-030313	Dipodomys ordii	81.87	0.00e+00	738.00
IUUC-Ete-032908	Echinops telfairi	80.20	0.00e+00	750.00
IUUC-Eca-034295	Equus caballus	77.73	0.00e+00	722.00
IUUC-Eeu-034454	Erinaceus europaeus	84.75	2.00e-113	402.00
IUUC-Fca-036380	Felis catus	94.12	0.00e+00	906.00
IUUC-Fal-037440	Ficedula albicollis	56.90	2.00e-15	73.20
IUUC-Gmo-038561	Gadus morhua	54.52	1.00e-120	426.00
IUUC-Gga-040198	Gallus gallus	39.70	5.00e-31	128.00
IUUC-Gac-041319	Gasterosteus aculeatus	53.12	3.00e-139	488.00
IUUC-Ggo-044456	Gorilla gorilla	64.81	1.00e-150	526.00
IUUC-Hsa-045738	Homo sapiens	94.71	0.00e+00	864.00
IUUC-Itr-049042	Ictidomys tridecemlineatus	91.57	0.00e+00	857.00
IUUC-Lch-050269	Latimeria chalumnae	43.95	3.00e-114	405.00
IUUC-Loc-052776	Lepisosteus oculatus	63.61	3.00e-109	389.00
IUUC-Laf-054269	Loxodonta africana	90.59	0.00e+00	876.00
IUUC-Mcc-055669	Macaca mulatta	94.31	0.00e+00	877.00
IUUC-Mga-059615	Meleagris gallopavo	56.25	9.00e-18	80.90
IUUC-Mmr-061562	Microcebus murinus	92.05	0.00e+00	764.00
IUUC-Mdo-062263	Monodelphis domestica	76.94	0.00e+00	739.00
IUUC-Mmu-064325	Mus musculus	89.02	0.00e+00	828.00
IUUC-Mpu-066385	Mustela putorius furo	93.14	0.00e+00	899.00
IUUC-Mlu-067000	Myotis lucifugus	90.59	0.00e+00	859.00
IUUC-Nle-069812	Nomascus leucogenys	94.31	0.00e+00	872.00
IUUC-Opr-070575	Ochotona princeps	95.10	6.00e-108	384.00
IUUC-Ont-072405	Oreochromis niloticus	49.32	4.00e-134	471.00
IUUC-Ocu-074358	Oryctolagus cuniculus	79.08	0.00e+00	747.00
IUUC-Ola-086403	Oryzias latipes	52.81	1.00e-139	489.00
IUUC-Oga-087986	Otolemur garnettii	92.16	0.00e+00	842.00
IUUC-Oar-089600	Ovis aries	96.08	0.00e+00	935.00
IUUC-Ptr-091224	Pan troglodytes	94.51	0.00e+00	863.00
IUUC-Pan-092739	Papio anubis	94.51	0.00e+00	880.00
IUUC-Pma-094407	Petromyzon marinus	47.45	1.00e-126	446.00
IUUC-Pfo-097161	Poecilia formosa	51.67	4.00e-133	468.00
IUUC-Pab-098627	Pongo abelii	94.51	0.00e+00	857.00
IUUC-Pca-100641	Procavia capensis	90.57	0.00e+00	812.00
IUUC-Pva-102670	Pteropus vampyrus	91.37	0.00e+00	865.00
IUUC-Pte-104234	Pyrenophora teres	24.86	1.00e-11	64.30
IUUC-Rno-105504	Rattus norvegicus	89.02	0.00e+00	826.00
IUUC-Sha-107342	Sarcophilus harrisii	76.25	0.00e+00	757.00
IUUC-Sar-113425	Sorex araneus	86.76	4.00e-112	398.00
IUUC-Ssc-115904	Sus scrofa	94.22	2.00e-90	324.00
IUUC-Tru-118096	Takifugu rubripes	51.96	3.00e-139	488.00
IUUC-Tni-119873	Tetraodon nigroviridis	50.49	2.00e-139	488.00
IUUC-Tbe-127578	Tupaia belangeri	90.07	0.00e+00	686.00
IUUC-Ttr-129107	Tursiops truncatus	95.69	0.00e+00	872.00
IUUC-Vpa-130353	Vicugna pacos	94.33	4.00e-122	431.00
IUUC-Xtr-132168	Xenopus tropicalis	43.39	8.00e-97	347.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence