iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Basic Information

Integrated Annotations

Tag

Content

iUUCD ID

IUUC-Ath-007340

Ensembl Protein ID

AT5G01480.1

UniProt Accession

Q9M026; Q9M026_ARATH

Genbank Protein ID

AED90351.1; CAB82264.1

Protein Name

Cysteine/Histidine-rich C1 domain family protein; Putative uncharacterized protein T10O8_190

Genbank Nucleotide ID

CP002688; AL161746

Gene Name

T10O8_190; At5g01480; F7A7.1

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
AT5G01480	AT5G01480.1	AT5G01480.1

Annotation

Single Nucleotide Polymorphisms (SNP)
dbSNP
mRNA Expression
GEO	ArrayExpress
Protein Expression/Proteomics
GPMDB

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
E3 activity/RING/PHD	1.00e-11	45.7	191	222

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

E3 activity/RING/PHD

   S: 3    vClvCgeggedekslveCekCrewfHpaClkls 35
           +C vC+  ++++  l +C  C+ ++H++C+ l+
   Q: 191  FCDVCALVDDSD-YLYVCLLCDFIVHKRCVYLP 222
           7********987.7****************988 PP

Organism

Arabidopsis thaliana

Protein Sequence
(Fasta)

MHHLDHTPSD RLLCPVERIQ KDKDGKVTTI SGGIHYIIKS SYFISNAEDE KPVHLLSLIL 60
RNRKEDKVLS FTFCYVCQIA LLGEAYYVYF CSYCPNYYHK ECVESPSVFH SSDHPKHPLQ 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GAACTATTAA TTAGAACTGA GACGATCACA CACATAAAGA ATCGCATTCT TGCTTTGCCG 60
TGAGAAAGTT TGAAATGAAA ATAAATTGTG ATACTTTGCC TGTGTACATA CATAAAGAGT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-0472--Membrane
KW-0479--Metal-binding
KW-1185--Reference proteome
KW-0812--Transmembrane
KW-1133--Transmembrane helix
KW-0862--Zinc
KW-0863--Zinc-finger

Interpro

IPR004146--DC1
IPR001965--Znf_PHD
IPR013083--Znf_RING/FYVE/PHD

Pfam

PF03107--C1_2

SMART

SM00249--PHD

Gene Ontology

GO:0016021--C:integral component of membrane
GO:0008270--F:zinc ion binding

KEGG

ath:AT5G01480

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Apl-003734	Anas platyrhynchos	50.00	1.90e-02	33.90
IUUC-Ame-011608	Astyanax mexicanus	38.30	1.70e-02	34.30
IUUC-Dre-028308	Danio rerio	38.30	9.00e-03	35.40
IUUC-Fal-036802	Ficedula albicollis	50.00	2.20e-02	33.90
IUUC-Gga-040884	Gallus gallus	50.00	1.90e-02	34.30
IUUC-Mga-060013	Meleagris gallopavo	50.00	1.90e-02	34.30
IUUC-Psi-093784	Pelodiscus sinensis	50.00	2.10e-02	33.90
IUUC-Tgu-116595	Taeniopygia guttata	50.00	2.00e-02	33.90

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence