iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

UUCD2 ID

IUUC-Sbi-113951

UUCD1 version

UUC-SoB-01638

Ensembl Protein ID

Sb04g037680.1

UniProt Accession

A0A194YT80; A0A194YT80_SORBI

Genbank Protein ID

KXG31391.1; KXG31392.1

Protein Name

Ubiquitin carboxyl-terminal hydrolase

Genbank Nucleotide ID

CM000763; CM000763

Gene Name

SORBI_004G350100

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Sb04g037680	Sb04g037680.1	Sb04g037680.1

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/UCH	6.40e-77	260.0	2	316

Active Site

Position(s)	Description	Evidence
82	Nucleophile	{ECO:0000256\|PIRSR:PIRSR038120-1}
157	Proton donor	{ECO:0000256\|PIRSR:PIRSR038120-1}

Domain Profile

DUB/UCH

   S: 7    ewleLesdPglftllvedfgvkrdiqveelysLdpenlglyqepvegllllFkinekressrksqvtsndlevvdediiktiffakqvigNsCaty 102
           +w+++esdPg+ft+l+++  vk++ qveelysLd ++l+++ +pv+gl++lFk+++ ++ +r           v  d   ++ffa+qvi N+Cat+
   Q: 2    SWCTIESDPGVFTELIQQMQVKGV-QVEELYSLDVDSLSQL-RPVYGLIFLFKWIPGEKDER----------LVVRDPNPNLFFAHQVITNACATQ 85
           7***********************.****************.***************99999..........34467789**************** PP
   S: 103  AllsvllncedklldlGttlsrlkestkaespenkalalgnqqvlecihnslariesrseperqdedneqytkeafhfvsyvningrlyeldglkp 198
           A+lsvl n  +   d+G++ls+lke+t a+ p+ k+la++n++ ++ +hns+ar+e++ ++e++++++   +++++hf+sy + +g lyeldglk+
   Q: 86   AILSVLMNRPEI--DIGPELSQLKEFTGAFTPDLKGLAISNSESIRTAHNSFARPEPFISDEQRAATK---DDDVYHFISYLPFEGVLYELDGLKE 176
           ********9998..***********************************************9997765...9************************ PP
   S: 199  fPldlgkk..keteelkdklkvvraflerikllesdeirfnllaivadrrviktlrlnvlkid..............keLlkLlkdieseeekiea 278
            P++lg++   ++ ++   ++ v+   eri+ +++ eirfnl+ai ++r+ ++ + l+ l+                + L + l+++ s +e   +
   Q: 177  GPVNLGQCggADDLDWLRMVQPVI--QERIERYSQSEIRFNLMAIIKNRKEVYSAELEELEKRreqilqemnktaatESLNNSLTEVISAIETVRE 270
           ********5445667888888888..************************9999998766655899999999999997777888888888888888 PP
   S: 279  qlddekekrkkfkiddirRtenydeficifikdlaregilrklvee 324
           ++  e+ek kk+k ++irR++ny  f++ ++k+la++++l+ lve+
   Q: 271  KMVMEEEKFKKWKTENIRRKHNYIPFLFNLLKMLAEKQQLKPLVEK 316
           89999***************************************98 PP

Organism

Sorghum bicolor

Protein Sequence
(Fasta)

MSWCTIESDP GVFTELIQQM QVKGVQVEEL YSLDVDSLSQ LRPVYGLIFL FKWIPGEKDE 60
RLVVRDPNPN LFFAHQVITN ACATQAILSV LMNRPEIDIG PELSQLKEFT GAFTPDLKGL 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

GTTACCCAGC GTGCGCGCTG CACTCTCCCT CCTCCCCACT TCTCTCTCGT GGCGACGGCG 60
GCGACGACGA CGACTGGGCG GCCGTCGCTG CCTCGCTACT CGCCAGGTTC CCAGGTCTTC 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0378--Hydrolase
KW-0645--Protease
KW-1185--Reference proteome
KW-0788--Thiol protease
KW-0833--Ubl conjugation pathway

Interpro

IPR001578--Peptidase_C12_UCH
IPR017390--Ubiquitinyl_hydrolase_UCH37

Pfam

PF01088--Peptidase_C12

PRINTS

PR00707--UBCTHYDRLASE

Gene Ontology

GO:0005622--C:intracellular
GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000936	Aegilops tauschii	82.57	2.00e-151	527.00
IUUC-Aml-001866	Ailuropoda melanoleuca	50.15	3.00e-86	310.00
IUUC-Atr-002966	Amborella trichopoda	71.26	1.00e-129	455.00
IUUC-Apl-003306	Anas platyrhynchos	46.05	4.00e-80	290.00
IUUC-Aca-004763	Anolis carolinensis	49.69	3.00e-85	307.00
IUUC-Aly-005581	Arabidopsis lyrata	72.73	2.00e-129	454.00
IUUC-Ath-007283	Arabidopsis thaliana	73.03	5.00e-133	466.00
IUUC-Ago-007999	Ashbya gossypii	37.08	2.00e-33	135.00
IUUC-Acl-008231	Aspergillus clavatus	51.27	1.00e-62	232.00
IUUC-Afl-008557	Aspergillus flavus	49.15	8.00e-59	219.00
IUUC-Afu-008988	Aspergillus fumigatus	52.52	3.00e-62	231.00
IUUC-Ani-009420	Aspergillus nidulans	41.19	4.00e-61	227.00
IUUC-Ang-009859	Aspergillus niger	48.76	6.00e-58	216.00
IUUC-Aor-010145	Aspergillus oryzae	49.15	8.00e-59	219.00
IUUC-Ate-010347	Aspergillus terreus	48.03	8.00e-60	223.00
IUUC-Ame-010791	Astyanax mexicanus	50.00	4.00e-88	317.00
IUUC-Bgr-012298	Blumeria graminis	41.49	1.00e-57	215.00
IUUC-Bta-013251	Bos taurus	50.62	5.00e-87	313.00
IUUC-Bci-013786	Botrytis cinerea	40.24	3.00e-60	224.00
IUUC-Bdi-014132	Brachypodium distachyon	85.37	3.00e-153	533.00
IUUC-Bol-015611	Brassica oleracea	72.42	2.00e-130	457.00
IUUC-Bra-017769	Brassica rapa	72.42	5.00e-130	456.00
IUUC-Cel-018604	Caenorhabditis elegans	44.38	3.00e-71	261.00
IUUC-Cja-019768	Callithrix jacchus	45.71	3.00e-80	291.00
IUUC-Cfa-020207	Canis familiaris	50.15	3.00e-86	310.00
IUUC-Cpo-021925	Cavia porcellus	47.99	1.00e-79	288.00
IUUC-Cre-022919	Chlamydomonas reinhardtii	50.31	7.00e-83	299.00
IUUC-Csa-023958	Chlorocebus sabaeus	50.16	2.00e-86	311.00
IUUC-Cho-024928	Choloepus hoffmanni	55.41	5.00e-17	80.90
IUUC-Cin-025771	Ciona intestinalis	42.68	3.00e-70	258.00
IUUC-Csv-026149	Ciona savignyi	44.55	4.00e-73	267.00
IUUC-Cgl-026424	Colletotrichum gloeosporioides	35.90	1.00e-47	182.00
IUUC-Cne-026955	Cryptococcus neoformans	32.84	3.00e-47	181.00
IUUC-Cme-027104	Cyanidioschyzon merolae	30.59	1.00e-44	172.00
IUUC-Dre-027409	Danio rerio	50.00	6.00e-88	316.00
IUUC-Dno-028921	Dasypus novemcinctus	50.15	8.00e-86	309.00
IUUC-Dor-030891	Dipodomys ordii	44.38	1.00e-33	137.00
IUUC-Dse-031170	Dothistroma septosporum	42.90	1.00e-63	235.00
IUUC-Dme-031677	Drosophila melanogaster	48.60	4.00e-82	296.00
IUUC-Ete-032646	Echinops telfairi	44.12	9.00e-43	167.00
IUUC-Eca-033776	Equus caballus	48.68	7.00e-77	279.00
IUUC-Eeu-035305	Erinaceus europaeus	43.41	7.00e-37	146.00
IUUC-Fca-035846	Felis catus	46.29	1.00e-81	295.00
IUUC-Fal-037597	Ficedula albicollis	49.66	5.00e-76	276.00
IUUC-Fox-037670	Fusarium oxysporum	45.26	2.00e-50	191.00
IUUC-Fso-038243	Fusarium solani	46.12	2.00e-50	191.00
IUUC-Gmo-038499	Gadus morhua	47.00	3.00e-76	277.00
IUUC-Ggr-039975	Gaeumannomyces graminis	44.53	6.00e-53	200.00
IUUC-Gga-040904	Gallus gallus	50.30	5.00e-89	320.00
IUUC-Gac-042058	Gasterosteus aculeatus	49.84	5.00e-84	303.00
IUUC-Gma-043030	Glycine max	76.95	7.00e-144	502.00
IUUC-Ggo-044699	Gorilla gorilla	45.54	4.00e-73	267.00
IUUC-Hsa-046227	Homo sapiens	50.00	7.00e-86	309.00
IUUC-Hvu-047359	Hordeum vulgare	82.82	5.00e-151	526.00
IUUC-Itr-048989	Ictidomys tridecemlineatus	46.02	8.00e-81	293.00
IUUC-Lch-049829	Latimeria chalumnae	49.84	3.00e-85	307.00
IUUC-Lpe-050899	Leersia perrieri	85.76	6.00e-149	519.00
IUUC-Loc-052264	Lepisosteus oculatus	49.22	1.00e-83	302.00
IUUC-Lma-053110	Leptosphaeria maculans	50.66	3.00e-54	204.00
IUUC-Laf-053639	Loxodonta africana	50.15	3.00e-86	310.00
IUUC-Mcc-055506	Macaca mulatta	50.16	2.00e-86	311.00
IUUC-Meu-056267	Macropus eugenii	43.67	2.00e-49	189.00
IUUC-Mor-057001	Magnaporthe oryzae	46.55	9.00e-56	209.00
IUUC-Mpo-057608	Magnaporthe poae	45.45	1.00e-37	148.00
IUUC-Mtr-057731	Medicago truncatula	75.68	1.00e-137	481.00
IUUC-Mla-059016	Melampsora laricipopulina	48.02	4.00e-48	183.00
IUUC-Mga-060178	Meleagris gallopavo	49.20	4.00e-80	290.00
IUUC-Mvi-060353	Microbotryum violaceum	39.63	3.00e-56	211.00
IUUC-Mmr-060738	Microcebus murinus	50.31	3.00e-86	310.00
IUUC-Mdo-062266	Monodelphis domestica	53.14	4.00e-61	226.00
IUUC-Mmu-063619	Mus musculus	51.09	2.00e-86	311.00
IUUC-Mac-065301	Musa acuminata	76.38	4.00e-143	499.00
IUUC-Mpu-066058	Mustela putorius furo	50.16	9.00e-86	309.00
IUUC-Mlu-067292	Myotis lucifugus	50.16	2.00e-86	311.00
IUUC-Nfi-068275	Neosartorya fischeri	41.94	2.00e-63	234.00
IUUC-Ncr-068713	Neurospora crassa	41.43	2.00e-60	224.00
IUUC-Nle-069013	Nomascus leucogenys	50.47	3.00e-87	314.00
IUUC-Opr-070628	Ochotona princeps	44.38	1.00e-74	272.00
IUUC-Ont-072688	Oreochromis niloticus	49.22	8.00e-83	299.00
IUUC-Oan-073004	Ornithorhynchus anatinus	53.11	4.00e-62	230.00
IUUC-Ocu-074303	Oryctolagus cuniculus	50.16	1.00e-85	310.00
IUUC-Oba-075002	Oryza barthii	86.28	3.00e-152	530.00
IUUC-Obr-076392	Oryza brachyantha	85.76	1.00e-144	504.00
IUUC-Ogl-077271	Oryza glaberrima	86.28	3.00e-152	530.00
IUUC-Ogu-078493	Oryza glumaepatula	86.59	2.00e-153	533.00
IUUC-Oin-080084	Oryza indica	86.59	2.00e-153	533.00
IUUC-Olo-080803	Oryza longistaminata	86.28	5.00e-153	532.00
IUUC-Ome-081146	Oryza meridionalis	85.67	8.00e-152	528.00
IUUC-Oni-082146	Oryza nivara	86.59	2.00e-153	533.00
IUUC-Opu-083633	Oryza punctata	86.08	7.00e-145	505.00
IUUC-Oru-084789	Oryza rufipogon	86.59	2.00e-153	533.00
IUUC-Osa-086196	Oryza sativa	86.59	2.00e-153	533.00
IUUC-Ola-087126	Oryzias latipes	49.21	8.00e-84	302.00
IUUC-Olu-087665	Ostreococcus lucimarinus	47.32	4.00e-73	266.00
IUUC-Oga-089140	Otolemur garnettii	46.42	3.00e-81	294.00
IUUC-Oar-090296	Ovis aries	50.31	7.00e-85	306.00
IUUC-Ptr-090566	Pan troglodytes	50.00	7.00e-86	309.00
IUUC-Pan-092052	Papio anubis	50.16	2.00e-86	311.00
IUUC-Psi-093723	Pelodiscus sinensis	50.34	5.00e-77	280.00
IUUC-Pma-094568	Petromyzon marinus	43.29	1.00e-64	238.00
IUUC-Pno-095120	Phaeosphaeria nodorum	51.75	8.00e-56	209.00
IUUC-Ppa-095761	Physcomitrella patens	68.62	9.00e-131	458.00
IUUC-Pfo-096210	Poecilia formosa	50.47	3.00e-85	307.00
IUUC-Pab-098463	Pongo abelii	50.00	5.00e-86	310.00
IUUC-Pop-099109	Populus trichocarpa	75.38	6.00e-141	492.00
IUUC-Pca-100108	Procavia capensis	53.04	2.00e-67	248.00
IUUC-Ppe-101176	Prunus persica	75.15	3.00e-138	483.00
IUUC-Pva-102629	Pteropus vampyrus	54.39	6.00e-69	253.00
IUUC-Pgr-103419	Puccinia graminis	40.54	5.00e-59	220.00
IUUC-Pte-104207	Pyrenophora teres	53.61	2.00e-40	157.00
IUUC-Pyt-104471	Pyrenophora triticirepentis	41.94	4.00e-59	220.00
IUUC-Rno-105579	Rattus norvegicus	44.94	3.00e-75	274.00
IUUC-Sha-106894	Sarcophilus harrisii	49.83	2.00e-73	268.00
IUUC-Sja-107732	Schizosaccharomyces japonicus	44.41	2.00e-67	248.00
IUUC-Spo-108371	Schizosaccharomyces pombe	44.38	3.00e-71	260.00
IUUC-Ssl-108467	Sclerotinia sclerotiorum	38.18	3.00e-48	184.00
IUUC-Smo-109396	Selaginella moellendorffii	70.99	1.00e-126	444.00
IUUC-Sit-110630	Setaria italica	96.34	2.00e-174	603.00
IUUC-Sly-110972	Solanum lycopersicum	74.60	5.00e-135	472.00
IUUC-Stu-112185	Solanum tuberosum	76.35	6.00e-148	515.00
IUUC-Sar-113294	Sorex araneus	54.10	9.00e-55	206.00
IUUC-Ssc-115501	Sus scrofa	48.72	7.00e-79	286.00
IUUC-Tgu-117152	Taeniopygia guttata	49.66	5.00e-76	276.00
IUUC-Tru-118388	Takifugu rubripes	49.53	3.00e-84	303.00
IUUC-Tsy-119109	Tarsius syrichta	50.00	5.00e-86	310.00
IUUC-Tni-120048	Tetraodon nigroviridis	49.53	3.00e-84	304.00
IUUC-Tca-121750	Theobroma cacao	75.75	7.00e-147	512.00
IUUC-Tre-122130	Trichoderma reesei	38.76	7.00e-54	203.00
IUUC-Tvi-122284	Trichoderma virens	41.12	3.00e-53	201.00
IUUC-Tae-124082	Triticum aestivum	82.52	2.00e-151	527.00
IUUC-Tme-127187	Tuber melanosporum	43.15	3.00e-69	254.00
IUUC-Tbe-127619	Tupaia belangeri	43.42	3.00e-58	217.00
IUUC-Ttr-128867	Tursiops truncatus	46.61	3.00e-56	211.00
IUUC-Vda-129912	Verticillium dahliae	38.33	3.00e-55	207.00
IUUC-Vpa-130552	Vicugna pacos	52.91	2.00e-60	224.00
IUUC-Vvi-130881	Vitis vinifera	76.58	8.00e-141	492.00
IUUC-Xtr-131934	Xenopus tropicalis	49.69	1.00e-86	312.00
IUUC-Xma-133312	Xiphophorus maculatus	50.16	3.00e-85	307.00
IUUC-Yli-134487	Yarrowia lipolytica	36.83	5.00e-55	207.00
IUUC-Zma-135639	Zea mays	83.79	2.00e-154	537.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence