iUUCD 2.0 - integrated annotations for ubiquitin and ubiquitin-like conjugation database

Protein
Gene
Annotation
Classification
Domain Profile
Function
Protein Sequence
Nucleotide Sequence
Keyword
GO
Orthology
TOP

Tag

Content

iUUCD ID

IUUC-Bra-017494

Ensembl Protein ID

Bra017972.1-P

UniProt Accession

M4DN85; M4DN85_BRARP

Protein Name

Uncharacterized protein

Ensembl Information

Ensembl Gene ID	Ensembl Transcript ID	Ensembl Protein ID
Bra017972	Bra017972.1	Bra017972.1-P

Status

Unreviewed

Classification

Family	E-Value	Score	Start	End
DUB/USP	4.90e-73	247.2	107	437

Active Site

Position(s)	Description	Evidence
N/A	N/A	N/A

Domain Profile

DUB/USP

   S: 2    GlkNlgNtCYmNSvLQcLsnipelrelllekkkeklneenpkepkgellkslqklfeelwkskkkavsprellkalkkeaeefsgyeqqDaqEfla 97
           Gl+Nlg+tCY NS+LQcL++ + +re +++    +++      ++ ++l+++++lf++l+ skk+ v+  +++k+l+  +       qqD +Ef +
   Q: 107  GLTNLGATCYANSILQCLYMNTAFREGVFS---VEVDV----LRQYPVLDQIARLFAQLYASKKSFVDSDAFVKTLELDNG-----IQQDIHEFST 190
           9*****************************...33332....34579*****************************96665.....5********* PP
   S: 98   flldqleeelkkeknkpkeeeeeedkselsdeaeekkkkknkslisdlFqgqlksqikclecdnvs...sreepfldlslpvpgkeetkkeslqdc 190
            ll+ le+ l                       + +  +k k++++dlF+g++++ ++c +c+++s   s+ e+f+ l+l+++g +     sl+d+
   Q: 191  LLLSLLERCL-----------------------RHSGVSKAKTIVQDLFRGSVSHVTTCSKCGRESeasSKVEDFYALELNIKGLK-----SLDDS 258
           **********.......................45678899**********************99877789***************.....9**** PP
   S: 191  LesftkeeelegenkyycekckkkqeaekklklkklPevLilhLkRfsfseeqksrekinkkvefpleLdlspfctspeekqkekkkYeLiavvvH 286
           L+++++ e+l+g+n+y+c +c+++++a++ +kl++lP+v++++LkR+ f  ++  ++ki+++++fp+ Ld+++ +++++e+   + +YeL+av++H
   Q: 259  LNDYFSLEHLNGDNQYFCGSCDARVDATRCIKLRTLPPVITFQLKRCVFLPKTTAKKKITSSLSFPQVLDMRSRLAESSEN---ELTYELSAVLIH 351
           *************************************************************************99996655...79********** PP
   S: 287  sG.slssGHYvayvknekgk.WllfdDskVtevkeeevleetg..................................staYvlfYk 336
           +G  ++sGHYva++k+ek + W++fdD++V+e+  + + e ++                                  s+aY+l+Y 
   Q: 352  KGsAVNSGHYVAHIKDEKTGlWWKFDDEQVSELGTHPFDEGSSstaqsesngaassgktkdvkqsgsssiksevfssSDAYMLMYS 437
           ****************99999************998888866688999*************************************6 PP

Organism

Brassica rapa

Protein Sequence
(Fasta)

MRPNTRNKNK RPRPSDAADS YSQILRKIHE ANDVTDEDVN QLFMISKPLC QGCRVNTRDN 60
PNCFCGLVPP PNGSRKSGLW QKTSEIIQAL GPDLSSELRD SDSTPAGLTN LGATCYANSI 120

It may take some time, please wait.

Nucleotide Sequence
(Fasta)

ATGAGACCTA ACACCAGGAA CAAGAACAAA CGGCCAAGAC CATCAGACGC TGCTGATTCC 60
TATTCTCAAA TTCTCCGGTA CTATATCTTT CACTTCTTTG CATTTTATTT ACTCCCCCTT 120

It may take some time, please wait.

Sequence Source

Ensembl

Keyword

KW-0181--Complete proteome
KW-1185--Reference proteome

Interpro

IPR006615--Pept_C19_DUSP
IPR001394--Peptidase_C19_UCH
IPR029071--Ubiquitin-rel_dom
IPR000626--Ubiquitin_dom
IPR033841--USP48
IPR018200--USP_CS
IPR028889--USP_dom

PROSITE

PS51283--DUSP
PS50053--UBIQUITIN_2
PS00972--USP_1
PS00973--USP_2
PS50235--USP_3

Pfam

PF00443--UCH

SMART

SM00695--DUSP

Gene Ontology

GO:0004843--F:thiol-dependent ubiquitin-specific protease activity
GO:0016579--P:protein deubiquitination
GO:0006511--P:ubiquitin-dependent protein catabolic process

Orthology

iUUCD ID	Species	Identity	E-value	Score
IUUC-Ata-000130	Aegilops tauschii	53.01	0.00e+00	1061.00
IUUC-Aca-004466	Anolis carolinensis	33.70	1.00e-79	290.00
IUUC-Aly-006249	Arabidopsis lyrata	80.49	0.00e+00	1711.00
IUUC-Ath-006700	Arabidopsis thaliana	81.51	0.00e+00	1745.00
IUUC-Ame-011554	Astyanax mexicanus	33.76	2.00e-85	310.00
IUUC-Bdi-014149	Brachypodium distachyon	54.30	0.00e+00	1094.00
IUUC-Bol-016289	Brassica oleracea	95.41	0.00e+00	2008.00
IUUC-Cel-018662	Caenorhabditis elegans	28.21	1.00e-28	122.00
IUUC-Cja-019991	Callithrix jacchus	32.12	8.00e-83	301.00
IUUC-Cpo-021706	Cavia porcellus	32.40	2.00e-80	293.00
IUUC-Cin-025307	Ciona intestinalis	34.53	5.00e-36	144.00
IUUC-Cne-027065	Cryptococcus neoformans	25.87	1.00e-46	182.00
IUUC-Dre-027624	Danio rerio	33.97	3.00e-89	323.00
IUUC-Dno-029633	Dasypus novemcinctus	33.93	3.00e-73	269.00
IUUC-Ete-032818	Echinops telfairi	31.69	4.00e-66	246.00
IUUC-Fal-036913	Ficedula albicollis	32.64	3.00e-85	309.00
IUUC-Gmo-038532	Gadus morhua	33.07	1.00e-81	298.00
IUUC-Gga-041041	Gallus gallus	32.64	8.00e-85	308.00
IUUC-Gac-042570	Gasterosteus aculeatus	32.59	4.00e-83	302.00
IUUC-Gma-043910	Glycine max	58.43	0.00e+00	1164.00
IUUC-Hvu-047303	Hordeum vulgare	57.94	7.00e-171	593.00
IUUC-Lpe-051612	Leersia perrieri	54.96	0.00e+00	1092.00
IUUC-Loc-052756	Lepisosteus oculatus	32.75	4.00e-81	296.00
IUUC-Mtr-058762	Medicago truncatula	57.48	0.00e+00	1160.00
IUUC-Mga-059896	Meleagris gallopavo	33.06	2.00e-83	303.00
IUUC-Mvi-060269	Microbotryum violaceum	33.54	2.00e-44	174.00
IUUC-Mmr-060887	Microcebus murinus	32.33	2.00e-82	300.00
IUUC-Mdo-062506	Monodelphis domestica	32.12	4.00e-83	303.00
IUUC-Mac-064896	Musa acuminata	54.43	0.00e+00	1115.00
IUUC-Mlu-067233	Myotis lucifugus	32.24	2.00e-82	300.00
IUUC-Nle-069052	Nomascus leucogenys	32.28	5.00e-83	302.00
IUUC-Ocu-073796	Oryctolagus cuniculus	33.73	1.00e-72	268.00
IUUC-Oba-075563	Oryza barthii	54.36	0.00e+00	1103.00
IUUC-Obr-076394	Oryza brachyantha	54.49	0.00e+00	1112.00
IUUC-Ogl-077339	Oryza glaberrima	69.03	4.00e-121	427.00
IUUC-Ogu-079007	Oryza glumaepatula	53.72	0.00e+00	1077.00
IUUC-Oin-079997	Oryza indica	54.36	0.00e+00	1103.00
IUUC-Olo-080364	Oryza longistaminata	53.38	0.00e+00	1092.00
IUUC-Ome-081165	Oryza meridionalis	53.63	0.00e+00	1074.00
IUUC-Oni-083026	Oryza nivara	54.36	0.00e+00	1104.00
IUUC-Opu-083284	Oryza punctata	54.26	0.00e+00	1085.00
IUUC-Oru-084797	Oryza rufipogon	54.55	0.00e+00	1103.00
IUUC-Osa-086221	Oryza sativa	69.03	4.00e-121	427.00
IUUC-Oga-088687	Otolemur garnettii	32.01	1.00e-82	301.00
IUUC-Oar-090345	Ovis aries	32.13	5.00e-81	295.00
IUUC-Psi-092937	Pelodiscus sinensis	34.46	1.00e-72	268.00
IUUC-Ppa-095808	Physcomitrella patens	45.17	0.00e+00	834.00
IUUC-Pop-099738	Populus trichocarpa	58.47	0.00e+00	1178.00
IUUC-Ppe-102091	Prunus persica	60.44	0.00e+00	1264.00
IUUC-Sha-107620	Sarcophilus harrisii	32.35	5.00e-83	302.00
IUUC-Sit-110683	Setaria italica	52.85	0.00e+00	1070.00
IUUC-Sly-111377	Solanum lycopersicum	55.94	0.00e+00	1108.00
IUUC-Stu-111969	Solanum tuberosum	60.28	0.00e+00	667.00
IUUC-Sar-113099	Sorex araneus	34.53	4.00e-74	273.00
IUUC-Sbi-113833	Sorghum bicolor	68.42	4.00e-108	384.00
IUUC-Tgu-117519	Taeniopygia guttata	31.97	2.00e-74	274.00
IUUC-Tsy-119201	Tarsius syrichta	29.75	1.00e-68	254.00
IUUC-Tca-121674	Theobroma cacao	61.96	0.00e+00	1318.00
IUUC-Tae-125814	Triticum aestivum	53.85	0.00e+00	1075.00
IUUC-Tur-126599	Triticum urartu	52.64	0.00e+00	1060.00
IUUC-Tbe-127782	Tupaia belangeri	28.21	5.00e-60	226.00
IUUC-Vvi-131353	Vitis vinifera	60.11	0.00e+00	1256.00
IUUC-Xtr-132172	Xenopus tropicalis	29.35	4.00e-55	209.00
IUUC-Xma-133263	Xiphophorus maculatus	29.76	4.00e-81	296.00

Created Date

25-Jun-2017

Protein Fasta Sequence

Nucleotide Fasta Sequence